G15577


Basic Information

Item Value
gene id G15577
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9432362 ~ 9599857 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21081
gtgtgtttgtctgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtatgtctgtctgtgtgtgtgtgtgtgtatgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtgtgtctctgtgtatgtctgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtttctctgtgtatgtctgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtttctctgtgtgtgtgtttctgtgtgtgtgtttctctgtgtgtgtgtgtgtg
>TU21082
tgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtttctctgtgtatgtctgtgtgtgtgtgtgtgtctctgtgtgtgtctgtatgtctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtttgtgtcagagctctgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21081 True 483 lncRNA 0.48 2 9465146 9599857
TU21082 False 409 lncRNA 0.60 2 9432362 9465795

Neighbor

gene id symbol gene type direction distance location
LOC120543784 NA coding upstream 93194 9331567 ~ 9339168 (+)
LOC120543792 NA coding upstream 102850 9309207 ~ 9329512 (+)
LOC120543803 NA coding upstream 117040 9309199 ~ 9315322 (+)
LOC120551113 NA coding upstream 131101 9283464 ~ 9301261 (+)
mindy4b NA coding upstream 156930 9259077 ~ 9275432 (+)
LOC120547748 LOC100707466,LOC102206406,LOC103373746,LOC101483620,LOC102290800 coding downstream 3403 9603260 ~ 9625781 (+)
clip3 clip3 coding downstream 150774 9750631 ~ 9797726 (+)
trnar-ucu_10 NA coding downstream 269976 9869833 ~ 9869924 (+)
trnar-ucu_11 NA coding downstream 284656 9884513 ~ 9884604 (+)
si:ch211-137a8.4 LOC103372141,LOC107102523,LOC105915351,LOC101172006,LOC106961384,LOC103378353 coding downstream 456137 10055994 ~ 10119839 (+)
G15575 NA non-coding upstream 158526 9258426 ~ 9273836 (+)
LOC120544104 NA non-coding upstream 198397 9229697 ~ 9233965 (+)
G15571 NA non-coding upstream 256557 9172832 ~ 9175805 (+)
G15567 NA non-coding upstream 313007 9118637 ~ 9119355 (+)
G15543 NA non-coding upstream 480347 8950262 ~ 8952015 (+)
G15638 NA non-coding downstream 649 9600506 ~ 9655663 (+)
G15657 NA non-coding downstream 6842 9606699 ~ 9607045 (+)
G15655 NA non-coding downstream 19395 9619252 ~ 9635945 (+)
G15653 NA non-coding downstream 27950 9627807 ~ 9630249 (+)
G15660 NA non-coding downstream 64144 9664001 ~ 9664312 (+)
G15605 NA other upstream 54158 9374154 ~ 9378204 (+)
G15572 NA other upstream 77734 9272899 ~ 9354628 (+)
G15565 NA other upstream 310070 9113842 ~ 9122292 (+)
LOC120543609 LOC108250351,LOC108250349 other upstream 333798 8906730 ~ 9098564 (+)
G15552 NA other upstream 340394 8994181 ~ 9091968 (+)
LOC120551159 fam13c other downstream 31534 9631391 ~ 9652831 (+)
G15642 NA other downstream 45280 9645137 ~ 9668479 (+)
LOC120551195 NA other downstream 266853 9866710 ~ 10003372 (+)
G15712 NA other downstream 402393 10002250 ~ 10003595 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other downstream 788375 10388232 ~ 10505338 (+)

Expression


Co-expression Network