G15653


Basic Information

Item Value
gene id G15653
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9627807 ~ 9630249 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21191
cctattctggtacaaccttaaaatacaattatgaacctgaaaatcagCATAACATGGGTGCTTTAatgggccgtgttcatttcacagatttctgtgagatcaggttgaaaTTTCAAAAACAGTCAAAATGAGCGTCATGGCTGTTCTAGTGTTGAGAATGTGCATGAGAACAGATAGTTTGCACATATTTCCATAACTTCCCACGTATTTTTGCACACACCCACAAGCACTCCCTTcgcacagacacatgcacgaTTTTGTTTCAGGATTGTTTCTATTTCCTACACTTTTGGCTGCTTTGAacacatctcctcactatctgctagctgcctgtcccctgaacacactgtaaaaaatatcactatctgctagctacctgtcccctgaacacgcTGTTAAAaatatctcactatctgctagctacctgtcccctgaacacgctgtaaaaaatatctcactatctgctagctgcctgtcccctgaacacactgtaaaaaatatctcactatctgctagctacctgtcccctgaacacgctgtaaaaaatatctcactatctgctagctgcctgtcccctgaacacactgtaaaaaatatctcactatctgctagctgcctgtcccctgaacacactgtaaaaaatatctcactatctgctagctacctgtcccctgaacacactgtaaaaaatatctcactatctgctagctacctgtcccctgaacacactgtaaaaaatatctcactatctgctagctacctgtcccctgaacacactgtaaaaaatatctcactatctgctagctacctgtcccctgaacacactgtaaaaaatatctcactatctgctagctacctgtcccctgaacacgctgtaaaaaacatctcaccCAACAtggcttagagcaccttttaaacgTATACGTGCACTCTTTGAGCTTTGTACTTTCCTCACGATAACAGATAAAGAGTTTAATCGTATCGTATATATTTGAATTTGTATTTCTATTTCGTGGCCTTTTTGTAAAAGCAGCTTTTTGGTAACGAAGCCTTTGTATCAGCAGTCTGAATCTGTCGTgtgattatttttgttataaattaaacagctgatgtgatTCCTGTGAGCTCtgcatgatgatgatggtgatgatgatgatgatgatgatgatgatgatggtgatgatgatgatgatgatgatgatgatgatggagtcTTGTGGTTATTTCTATATACTGGGAATGTGTTTCATAAAGCCTCGCATGGCATCACAAACTGCTAAACTTTCTACGAATGTTTTGActatttctttatatatatgtttttttaaggCGATTAAAACTTGGgtaagaaagacagacaggcagacagacagatagatagacaggcagacaggcagatagacagagagacaggcagacagacagatagatagacaggcagacaggcagatagacagagagacaggcaggcagatagatagatagatagatagatagatagatagatagatagatagatagacagacagacagacagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaaaaaaaaaa
>TU21192
cctattctggtacaaccttaaaatacaattatgaacctgaaaatcagCATAACATGGGTGCTTTAatgggccgtgttcatttcacagatttctgtgagatcaggttgaaaTTTCAAAAACAGTCAAAATGAGCGTCATGGCTGTTCTAGTGTTGAGAATGTGCATGAGAACAGATAGTTTGCACATATTTCCATAACTTCCCACGTATTTTTGCACACACCCACAAGCACTCCCTTcgcacagacacatgcacgaTTTTGTTTCAGGATTGTTTCTATTTCCTACACTTTTGGCTGCTTTGAacacatctcctcactatctgctagctgcctgtcccctgaacacactgtaaaaaatatcactatctgctagctacctgtcccctgaacacgctgtaaaaaatatctcactatctgctagctacctgtcccctgaacacactgtaaaaaatatctcactatctgctagctgcctgtcccctgaacacgctgtaaaaaatatctcactatctgctagctacctgtcccctgaacacgctgtaaaaaatatctcactatctgctagctacctgtcccctgaacacgctgtaaaaaatatctcactatctgctagctgcctgtcccctgaacacactgtaaaaaatatctcactatctgctagctgcctgtcccctgaacacactgtaaaaaatatctcactatctgctagctacctgtcccctgaacacactgtaaaaaatatctcactatctgctagctacctgtcccctgaacacactgtaaaaaatatctcactatctgctagctacctgtcccctgaacacactgtaaaaaatatctcactatctgctagctacctgtcccctgaacacactgtaaaaaatatctcactatctgctagctacctgtcccctgaacacgctgtaaaaaacatctcaccCAACAtggcttagagcaccttttaaacgTATACGTGCACTCTTTGAGCTTTGTACTTTCCTCACGATAACAGATAAAGAGTTTAATCGTATCGTATATATTTGAATTTGTATTTCTATTTCGTGGCCTTTTTGTAAAAGCAGCTTTTTGGTAACGAAGCCTTTGTATCAGCAGTCTGAATCTGTCGTgtgattatttttgttataaattaaacagctgatgtgatTCCTGTGAGCTCtgcatgatgatgatggtgatgatgatgatgatgatgatgatgatgatggtgatgatgatgatgatgatgatgatgatgatggagtcTTGTGGTTATTTCTATATACTGGGAATGTGTTTCATAAAGCCTCGCATGGCATCACAAACTGCTAAACTTTCTACGAATGTTTTGActatttctttatatatatgtttttttaaggCGATTAAAACTTGGgtaagaaagacagacaggcagacagacagatagatagacaggcagacaggcagatagacagagagacaggcagacagacagatagatagacaggcagacaggcagatagacagagagacaggcaggcagatagatagatagatagatagatagatagatagatagatagatagatagacagacagacagacagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21191 False 1582 lncRNA 0.39 5 9627807 9630249
TU21192 True 1630 lncRNA 0.39 5 9627807 9630249

Neighbor

gene id symbol gene type direction distance location
LOC120547748 LOC100707466,LOC102206406,LOC103373746,LOC101483620,LOC102290800 coding upstream 2026 9603260 ~ 9625781 (+)
LOC120551143 NA coding upstream 73191 9544019 ~ 9554616 (+)
LOC120543784 NA coding upstream 288639 9331567 ~ 9339168 (+)
LOC120543792 NA coding upstream 298295 9309207 ~ 9329512 (+)
LOC120543803 NA coding upstream 312485 9309199 ~ 9315322 (+)
clip3 clip3 coding downstream 120382 9750631 ~ 9797726 (+)
trnar-ucu_10 NA coding downstream 239584 9869833 ~ 9869924 (+)
trnar-ucu_11 NA coding downstream 254264 9884513 ~ 9884604 (+)
si:ch211-137a8.4 LOC103372141,LOC107102523,LOC105915351,LOC101172006,LOC106961384,LOC103378353 coding downstream 425745 10055994 ~ 10119839 (+)
LOC120550666 LOC105915347 coding downstream 729140 10359389 ~ 10376811 (+)
G15657 NA non-coding upstream 20762 9606699 ~ 9607045 (+)
G15577 NA non-coding upstream 27950 9432362 ~ 9599857 (+)
G15619 NA non-coding upstream 37664 9589607 ~ 9590143 (+)
G15637 NA non-coding upstream 91214 9533530 ~ 9536593 (+)
G15636 NA non-coding upstream 95350 9531026 ~ 9532457 (+)
G15660 NA non-coding downstream 33752 9664001 ~ 9664312 (+)
G15662 NA non-coding downstream 49918 9680167 ~ 9680904 (+)
G15666 NA non-coding downstream 54767 9685016 ~ 9685361 (+)
G15668 NA non-coding downstream 62154 9692403 ~ 9693478 (+)
G15684 NA non-coding downstream 181597 9811846 ~ 9812132 (+)
serp1 NA other upstream 141960 9411490 ~ 9485847 (+)
G15628 NA other upstream 168590 9458478 ~ 9459217 (+)
G15605 NA other upstream 249603 9374154 ~ 9378204 (+)
G15572 NA other upstream 273179 9272899 ~ 9354628 (+)
G15565 NA other upstream 505515 9113842 ~ 9122292 (+)
LOC120551159 fam13c other downstream 1142 9631391 ~ 9652831 (+)
G15642 NA other downstream 14888 9645137 ~ 9668479 (+)
LOC120551195 NA other downstream 236461 9866710 ~ 10003372 (+)
G15712 NA other downstream 372001 10002250 ~ 10003595 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other downstream 757983 10388232 ~ 10505338 (+)

Expression


Co-expression Network