LOC120544569 (dgkd,LOC102780004)


Basic Information

Item Value
gene id LOC120544569
gene name dgkd,LOC102780004
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8692074 ~ 8742123 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21420
tgtgtgtgtgtgtgtgtctggtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtgtgtgtgtgtgttacaggtcATCACCCCCTGCAGACGTCTCATTCTGTGTGCAGACAACAGGAAGGAGATGGAGGAGTGGATGGCCGCTCTACGCTGCATTCAGAACAGACACAACTAtgagTCCACCCAGTACAGCATGGACCACTTCAGCGGGACACACAACTGGTACGCGTGCTCTCACGCCAGACCGACCTACTGCAACGTGTGCAGAGAGGCGCTGTCGGGGGTCACGTCCCACGGCCTGTCCTGTGAAGGTACtaatacacacagtacacacacatagtacacaACCAGAATATACACAGAGTACACACCCAGAATATACACATAGTACACACC
>XM_039778440.1
ACCCCCTGCAGACGTCTCATTCTGTGTGCAGACAACAGGAAGGAGATGGAGGAGTGGATGGCCGCTCTACGCTGCATTCAGAACAGACACAACTAtgagTCCACCCAGTACAGCATGGACCACTTCAGCGGGACACACAACTGGTACGCGTGCTCTCACGCCAGACCGACCTACTGCAACGTGTGCAGAGAGGCGCTGTCGGGGGTCACGTCCCACGGCCTGTCCTGTGAAGGTGTCCATGCCCCACCAGTGGCTGGAGGGGAACCTGCCTGTCTCCGCTAAGTGTAACGTCTGTGATAAAACGTGTGGCAGCGTCCTCCGCCTGCAGGACTGGAGGTGTCTCTGGTGTAAAGCCATGGTGCACTCCGGCTGTAAGGAGCAGCTGTCCTCTAAATGTCCTCTGGGTCAGTGTAAGGTCTCAGTCATCCCTCCTACAGCTCTCAACAGCATCGACTCTGAtggtttcTGGAAGGCCTCCTGCCCCCCCTCATGTACCAGTCCTCTGCTGGTCTTCGTGAACTCTAAGAGCGGAGACAACCAGGGGGTCAAGTTCCTACGCCGGTTCAAACAGCTGCTGAACCCGGCTCAGGTGTTCGACCTGATGAATGGGGGGCCACACCTGGGGCTGCGGTTGTTCCAGAAGTTTGATACGTTCAGGATCCTGGTGTGTGGAGGAGACGGCAGCGTTGGCTGGGTTCTTTCTGACATAGACACTCTCACACTGCacaaacagtgcCAGCTGGGGGTTCTCCCTCTGGGGACGGGGAACGACCTGGCCCGGGTCCTGGGCTGGGGGGCCGCCTGCGACGACGACACACAGCTGCCCCAGATCCTGGAGAAACTGGAGAGGGCCAGCACCAAGATGTTAGACAGGTGGAGTATTATGGTCTATGAGACAAAATTTCCACGGCAACGTTCTGCATCCTCCGTCACCGAGGACTGCAGTGAGGACTCTGAGGTTCAGGAGATTCTGACCTATGAGGACTCGGTTGCTGCTCACCTGTCCAAGATCCTGACATCAGACCAGCACTCTGTCGTCATCTCCTCAGCCAAggtCCTGTGTGAGACGGTGAAGGACTTTGTTGCTCGGGTGGGTAAAGCGTACGAGAAGAACACAGAGAGTTCAGAGGAGTCCGAGAGCATGGCCAAGAAGTGCTGTGTGCTGAAGGAGAAGCTGGACTCTCTCCTCCAGACTCTGAACCAGGAGGCCCAGGCCTCCACGCTGCCggctcccccccccaccatcgccgaggagcaggaggaggccGAGGGGGTCGCCATGaaaacctcttcctcctcttcatcaccatcatcatcaccatcatcatcatcatcatcacacccCCCTCCACCAGCCGCCATCTTTAAACCCAGAGAGCAGCTGATGCTGAGAGCCAACAGTCTGAAGAAAGCCATCAGACAGATCATCGAACACACCGAGAGAgcggtAGATGAGCAGAATGCTCAGAcccagcagcatcagcagctGTTCTCTCCTCTCGGTGCTGAGGAAGACGAGGGTCtgccagaggaggaagaggaggaggacaaggTCTCTCTGCAGTCGTCCTACAGCACCAAGCAACGCAGCACACGCAGAGtcACTAAGACTCCGTGTGAGAGGCTGATCAGTAAAGGCGGCCTATCACTGGGCAGCTCTGCGTCACTTCCTCTCCAGACAGGAAGTAGGGAGAACATGCCCATGCTGAACACAAAGATCCTCTATCCAGctcTCAGAGGTTTCTCAGCTTCTCTCTCCAGCAGTTCTGTCATCAGTCGACTATTGGTCAATGCCGACCCGTTCAGCTGTGACCCCGACAACatgttacaGTGTGATGGGCGTCCGATCCCTCTCCCCAGTCTGCAAGGCATCGCTGTGTTGAACATCCCGAGCTACGCCGGAGGAACCAACTTCTGGGGAGGAACCAAAGAGGACGATacgTTCACAGCTCCGTCCTTCGATGATAAGATCCTGGAGGTGGTGGCCGTGTTCGGCAGCATGCAGATGGCTGTCTCCAGGGTGATCAACCTGCAACACCACCGCATTGCACAgtgcCGGATGGTGAAGATCACTATCCTGGGTGATGAAGGCGTCCCGGTGCAGGTAGACGGGGAGGCCTGGGTCCAGCCTCCAGGTTACATCAAGATCATCCACAAGAACCGGACCCAGACCCTGACCAGGGACAGGgcgTTCGAGAGCACCCTGAAGTCCTGGGAGGACAAACAGAAGTGTGAGTTTGTCCGGTCGCCCCCCCCTCCGCCGGCCGCGTCCTCACAGCCGGAGATCGTCTCCGAGGAAGAGACGGCGCTCGTCAGCGAGTTGGGACAGGCAGCTGGAGCTCTcatacacagTATCCGGGAGGTGGCCCAGTCTCATCACAGTCTGGAACAGGAACTGGCTCACGCTGTCAACGCCAGCTCCAAGGCCATGGACGTGGTCTACGCCAAGTCCAACACCTCCGGGgCCCTGAGCTGCAGTCTGGTCCTTCAGATGGTCAGCAACGTCAAAGCCTTACTCAGTGAGACTGAACTGCTGCTGGCTGGGAAGATGTCCATGcagctgGATCCTCCCCAGCAGGAACAGCTGACTGCAGCTCTGAGTTCGGTGTCTCAGCAGCTCCGACGACTCGCTGACGTTCCCTGGCTCAGTCCCGTCATCGACGAGgGTCCTCTGACAGATTTTTCCAAACGCAGTCGGAGCGCAAAGTTTCGTCTCGTCCCGAAGttcaaaaaagacaaaaacaacaaaaacaaagagacCTGCGCTACTCTGTCTCTGCCAGttcACCAGTGGGGGACAGAGGAGGTGGGGGCGTGGCTGGACTTCCTGTGTCTCTCTGAGTATAAAGACATCTTCATCGGACACGACGTCCGCGGAGCCGAACTCATCCACCTGGAGAGGAGGGACCTGAAGgatctGGGTGTAACTAAAGTAGGTCACATTAAGAGGATCCTTCAGGGAATCCGAGAGATCAACAGGAACAGCAGCGCCAGCGAGGCCTGAAGACGCCGTCAGATGCAGCGATGTGATAACGGACGTTTCCTCTGACCCTGAACACAGCCACATGCTGTGACATCACATCTGACGCTCGCTGTGATTGGACCAATACCAGGACCCGCTAGTGCCTTGTCATCTCACCCGGGAGGCGGAGAGGGCGGGGCCTAACATGGATCCACCGCCACCAGAGACTTTTAAACCTTTATTGACATTGTCTTACCTTCAGACCCAAACAGAACGTTTAGAACAAGTCTGCCGAGTCAGAGACTCTCTGTGTGGAGAGGACACGCGTTCACGTTCTCCCTTTGGTCTCATTTCTTTAGAATCTGCAGAATCTGTCTTcatgtctttctgtcttcatgtctttctgtctttctgtcttcatgt

Function

symbol description
dgkd Enables diacylglycerol kinase activity; kinase binding activity; and protein dimerization activity. Involved in several processes, including glycerolipid metabolic process; lipid phosphorylation; and positive regulation of clathrin-dependent endocytosis. Located in clathrin-coated pit; cytoplasmic vesicle; and cytosol.

NR:

description
PREDICTED: diacylglycerol kinase delta isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21420 False 397 lncRNA 0.51 2 8739270 8742123
XM_039778440.1 True 3385 mRNA 0.56 26 8692074 8742043

Neighbor

gene id symbol gene type direction distance location
LOC120543940 NA coding downstream 7590 8682663 ~ 8684484 (-)
LOC120543728 NA coding downstream 53987 8622482 ~ 8638087 (-)
LOC120543874 LOC101482597,LOC103360230,LOC107102854 coding downstream 299797 8369769 ~ 8392277 (-)
LOC120543856 NA coding downstream 593610 8079224 ~ 8098464 (-)
LOC120543635 NA coding downstream 628733 8022628 ~ 8063341 (-)
LOC120543840 LOC100693035,LOC101486393,LOC103152962,LOC103475253,LOC106951493 coding upstream 86290 8828413 ~ 8841376 (-)
atg16l1 atg16l1 coding upstream 107367 8849490 ~ 8880046 (-)
LOC120554466 NA coding upstream 112189 8854312 ~ 8854592 (-)
LOC120554461 NA coding upstream 118238 8860361 ~ 8860640 (-)
LOC120554459 NA coding upstream 132218 8874341 ~ 8874620 (-)
LOC120544089 NA non-coding downstream 19732 8672017 ~ 8672342 (-)
G15783 NA non-coding downstream 91761 8551591 ~ 8600313 (-)
G15793 NA non-coding downstream 109514 8580621 ~ 8582560 (-)
G15768 NA non-coding downstream 187920 8503932 ~ 8504154 (-)
LOC120544083 NA non-coding downstream 207705 8483166 ~ 8484369 (-)
G15812 NA non-coding upstream 8288 8750411 ~ 8750948 (-)
G15819 NA non-coding upstream 35907 8778030 ~ 8778542 (-)
G15826 NA non-coding upstream 59323 8801446 ~ 8801978 (-)
G15832 NA non-coding upstream 142733 8884856 ~ 8885515 (-)
LOC120544086 NA non-coding upstream 143803 8885926 ~ 8886911 (-)
G15771 NA other downstream 35111 8601917 ~ 8656963 (-)
G15757 NA other downstream 222314 8468357 ~ 8469760 (-)
LOC120551075 LOC103475274,LOC105922519 other downstream 536771 8137301 ~ 8155303 (-)
trnaa-cgc NA other downstream 755747 7936256 ~ 7936327 (-)
lrch3 lrch3 other downstream 1348181 7309914 ~ 7343893 (-)
spint2 NA other upstream 138315 8880438 ~ 8914977 (-)
G15820 NA other upstream 229791 8971914 ~ 9046433 (-)
LOC120543625 NA other upstream 388861 9130984 ~ 9210517 (-)
G15903 NA other upstream 495844 9237967 ~ 9238784 (-)
eif2a eif2a other upstream 606086 9348209 ~ 9433655 (-)

Expression


Co-expression Network