G15820


Basic Information

Item Value
gene id G15820
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8971914 ~ 9046433 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21433
CAAAGATCATCATCGTTTCATTCTCACAGCATTTGAGACGACAGAGACATTAGAATAACATGTAGAATTATTTACAATAAGCAGGTTTATCTTTTATAGTGTGTAAGTTTTATATTGTTCATGTGTGTAAAGTCTGTATGTTTACTCTAATACTGATGGTCTCAGCTTCACACTGATTTAAAATGATAATCACATCTGGACTTACCGAGCCTTTCTGCAGTTCCtcacagctggaatcagtctccGTCGTCCCTCCTCTGATGTGTTGTACTTCTCCAGGTCCAACTCATCCAGAACCTCCTCTGACATCTGCAGCATGTAGGCCAGAGCTGAGCAGTGGATCACAGAGAGTTCCTTCTCTGATCTGTTCTCTGACTTCAGGAACTCTTGGATCTCCTGATGGACTGAGTGGTCGTTCATCTCCGTCAGACAGTGGAAGATGTTGATGCTTCTGTCAGGAGAGATCTCATACCTGTTCCTATTCTTCAGGTTGTTGATGGCTCTCTGGATGATTTCTggactgttgtctgtctgacccagcagGCCTCCTAAGAGTCTCTGGTTGGACTCCAGAGAGAGGCCATGAAGGAAGCGGACAAACAGGTCCAGGTGGCCATTTTCACTTTCAAGGGATTTCTCCATGGCTGTCTCCAGGAAGTCATCCAGGGATGGGTAATGATCATTGTCCCAACGAACACGATTATCTTCTCCCAGGAAGTCCTTGAGtacctgtgtgttcctgttggtgtaacagtggaacaggtagactgcagccagaaactcctgaacgctCAGATGAACGAAGCAGTAGACAGTTTTCTGGAAGATCACACTCTCTCTTTTGAAGATCTCTGAACAAACTCCTGAGTACAGCGAGGCCTCTGTGACATCCAGACCACAGCGCTCCAGGTCTTCTTGGTAGAACATGATGTTTCCTTTCTCCAGCTGTTCAAACGCCAGCCTCCCCAGCTTCAGAAGAACTTCCCTGTCAGCCTCCGTCAGCTCCTGTGGACTCGTCTCATGTCCCTCAGCATACTTGagcttcttcctctttgtctgaaccagcaggaagtgtgagtacatgtcagtcagggtcttgggctgCTCTCCTCTCTGGTCTGTAGTCAACATGTGGTCCAGAACTGTAGccgtgatccagcagaagactgggatcagacacatgatgtggaggctcctggaggtcttgatgtgggagatgattctgctggacAGCTCGTCATCACTgactctcttcctgaagtactcctccttctgggcATCAGTGAAGCCTTGTACTTCTGTTACCCTGTCAACACAtgcaggagggatctgattggctgctgcaggtcgggaAGTTATCCAGACGAGAGCCAAGGGAAGCAGCTTCCCCTGGATGAGGTTTGTCAACAGCACATTGACTGATGACTTCTGTGTGACATCAGAAACAGTCTTCCTCTTCTTGAAACCCAGGTAAAGTCTGCTTTCATCCAGGCCATCAAAGATGAAGAGAAGTTTAGAGCCAGCGAGCTGCTCTGCTGGGACCTCCTGTAATGTTGGATGGAAAACACGGAGCAGCTCCAGAAGACTGTACTGCTCATCTTTGATCAAGTTCAGCTCCCTGAAGGAAAGAGGAATCACCAGACTGATATCTTGGTTTTTCCAAACCCTCGCCGGCGGTCAGACAGAACTTCTGCACTGAGAAGGTTTTTCCAACGCCAGCGACGCCGCTCGTCAGAACCACTCTGATGTGTTTCTTTTGGTCAGGTAAGGCTTTAAAGATGTCACAGCACTTGATTGGAGAGTCATGGAGGGTCTTCTTCTTGGAAGCTGACTCGAGCTGCCTCACCTCATGTTGGGTATTAACCTCTTCACTCTGTCCCTCTATGAGGTAGAGGACAGTGTAGATCCTGTTGAGGAGGGTTCTACTTCCTGTTTCAGCTCCTTCAGTCACACGTTCAAATGTCCCCTTCAGCCTGATCTTATGTTTCTGATGACCAAC
>TU21437
CAAAGATCATCATCGTTTCATTCTCACAGCATTTGAGACGACAGAGACATTAGAATAACATGTAGAATTATTTACAATAAGCAGGTTTATCTTTTATAGTGTGTAAGTTTTATATTGTTCATGTGTGTAAAGTCTGTATGTTTACTCTAATACTGATGGTCTCAGCTTCACACTGATTTAAAATGATAATCACATCTGGACTTACCGAGCCTTTCTGCAGTTCCtcacagctggaatcagtctccGTCGTCCCTCCTCTGATGTGTTGTACTTCTCCAGGTCCAACTCATCCAGAACCTCCTCTGACATCTGCAGCATGTAGGCCAGAGCTGAGCAGTGGAACACAGAGAGTTTCTTCTCTGATCTGTTCTCTGACTTCAGGAACTCTTGGATCTCCTGATGGACTGAGTGGTCGTTCATCTCCGTCAGACAGTGGAAGATGTTGATGCTTCTGTCAGGAGAAATATCATAACTGTTCATCTCCTTCAGGTTGTTGATGGCTCTCTGGATGATGTTCTggactgttgtctgtctgacccagcagGCCTCCTAAGAGTCTCTGGTTGGACTCCAGAGAGAGGCCATGAAGGAAGCGGACAAACAGGTCCAGGTGGCCATTTTTACTTTCAAGGGATTTCTCCATGGCTCTCTCCAGGAATACATCCAGGGATGAACTAACGTAGTCTTGATCATTGTCccaatcaccatcatcatca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21433 True 1999 TUCP 0.44 2 8971914 9046433
TU21437 False 716 lncRNA 0.44 2 8973263 9046433

Neighbor

gene id symbol gene type direction distance location
LOC120543996 NA coding downstream 48548 8921436 ~ 8923366 (-)
atg16l1 atg16l1 coding downstream 91868 8849490 ~ 8880046 (-)
LOC120554459 NA coding downstream 97294 8874341 ~ 8874620 (-)
LOC120554461 NA coding downstream 111274 8860361 ~ 8860640 (-)
LOC120554466 NA coding downstream 117322 8854312 ~ 8854592 (-)
LOC120551100 NA coding upstream 149554 9195987 ~ 9201417 (-)
LOC120544027 ap2m1,LOC108440593,LOC106580654,LOC106612407 coding upstream 441889 9488322 ~ 9502894 (-)
LOC120551135 LOC101071594,LOC102800178,LOC103356830 coding upstream 477774 9524207 ~ 9531095 (-)
LOC120543835 NA coding upstream 484588 9531021 ~ 9543141 (-)
LOC120554346 NA coding upstream 585490 9631923 ~ 9632028 (-)
G15851 NA non-coding downstream 1301 8969282 ~ 8970613 (-)
G15836 NA non-coding downstream 51097 8918024 ~ 8920817 (-)
LOC120544051 NA non-coding downstream 75532 8894784 ~ 8896382 (-)
LOC120544086 NA non-coding downstream 85003 8885926 ~ 8886911 (-)
G15832 NA non-coding downstream 86399 8884856 ~ 8885515 (-)
G15874 NA non-coding upstream 54498 9100931 ~ 9105601 (-)
G15885 NA non-coding upstream 127691 9174124 ~ 9175427 (-)
G15916 NA non-coding upstream 276326 9322759 ~ 9347087 (-)
G15945 NA non-coding upstream 316172 9362605 ~ 9363144 (-)
LOC120544080 LOC108250349,LOC107380983,LOC102776571,LOC108242155 non-coding upstream 340242 9386675 ~ 9397215 (-)
spint2 NA other downstream 56937 8880438 ~ 8914977 (-)
LOC120544569 dgkd,LOC102780004 other downstream 229791 8692074 ~ 8742123 (-)
G15771 NA other downstream 314951 8601917 ~ 8656963 (-)
G15757 NA other downstream 502154 8468357 ~ 8469760 (-)
LOC120551075 LOC103475274,LOC105922519 other downstream 816611 8137301 ~ 8155303 (-)
LOC120543625 NA other upstream 84551 9130984 ~ 9210517 (-)
G15903 NA other upstream 191534 9237967 ~ 9238784 (-)
eif2a eif2a other upstream 301776 9348209 ~ 9433655 (-)
LOC120551129 NA other upstream 467043 9513476 ~ 9522231 (-)
LOC120551163 NA other upstream 630402 9676835 ~ 9710132 (-)

Expression


Co-expression Network