G15836


Basic Information

Item Value
gene id G15836
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8918024 ~ 8920817 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21457
aatttttgctgtgttactgcttatggcatgacattttgtaggaacctttctttttggtcaaaatgtttgttttttactctaATAAGTTTTTTTATACTtgattgattcattttgtaccctctggacacctttgtggcaaaaatgtacacgcacacaaaaattattattttattgttattaaatcatcatcaatatgtttttcataaatcacttaaacaacttctaacttgctcaaaaataccaaacattcaataatgttcaggattttaaccctttaaatgccagtaaaggcagtgagataaaaacatgtagttataatggaagtcaatgaggcatttttgcccacgaagatgtccaaagggagtatctggaactacataaaaaataataatgcaatcaaatcagttttgttgcttatctttgacatatccaagcctctaatcaccaccaaagccccattcccctatgatttattttatggaaaataattaatgttctgttgggtttttcataaataattgttacttcaaagatttaaaactggcatttaaagggttaaaatccagaaaatgattaaatgtttggtagttttgagtaagttagaagttgtttaagtgatttatgaaaaaaaagcagaaaacaatattgatatatgattatttaatatcagtttttggacatgtacatttttgcctcgaaggtgtccaaagggagtatctggaactacataaaaaatactaatgcaatcaaattaattttgttgcttatctttgacatatccaagactctaatcaccaccaaagcctcATCTACAAGAACCCCATTGACACCCTGATTACAGAACAAGAActaacagacaaaataaaaaagcttaAACTCCGAAAGACCTGTGGTGCTGACtccattttaaatgaaatgatcaAATACACAGATAATAAATTCAAATTGGTCATCCTAAAAGCTTTCAATATCACCCTAAATTCAGGTATTTTCCCAGCTGTCTGGAACCAAGGACTGATAACCCCAATCCACAAAAATGGAGACAAGTTTGACCAAAATAACTACAGAGGAATCTGTGTGACCAGTACCTGGTAAAACTATTCTGCAGCATTATAAATGGCAGAATCTTACAATTCATCAGTGAACACAATATCCTGAGCAAAAGTCAAATTGGATTTCTCCCAAAATATCGAACTTCAGACCGCATCTTTACTCTCCACACCCTCATTGACAAACAATTAAACCAGAACAAAggaaaaatcttttcatgttttGTAGACTTTAAAAAAGCATTCGATTCAATTTGGCATGATGGTCTTTTCTATAAATTGATTGAAATGGGTATTGGAGGAAAAACATATGATATCATAAAATCtatgtatacaaacaccaaatgttCAGTTAAAATTGGCCACcaacaaacacatttctttcCCCAACAACGTGGAGTGAAACAGGGATGCTGCCTGTCCCCGACTCTGTTCAACATTTATATAAATGAATTGGCAAAAAATCTGGAACTTTCTACATCCCCTGGTATCACTCTGGGAGATACTGACATCAAATGTTTGTTATATGCTGATGATCTAGTCCTGCTGTCCCCTACAAAAGAAGGCCTATAACAACACCTGGACCTCCTGCACAGTTTCTGTCAGACATGGGCTCTGACTGTCAAcctaaacaaaaccaaaatactGATTTTCCAGAAAAGATCTGGGAATTACAATAAACATCAATTCTATTTAAATACAGTTCAATTAGAACATGTGAAAAACTACACATATTTAGGTCTCAATATTAGTTCATCAGGTAGTTTTCAAATGGGTGTGAATGAGCTGAGAGACAAATCAAGAAGAGCAttttatgcaattaaaagaaaaatcaaaacaGACATTCTAATTaaaatttggttaaaaatatttaaatcagTAATAGAACCCATTGCTCTATATTGCAGCGAAATATGGGGCCCGCTCAGtagacatttaaaatgtactgacTGGGACAATCACCCAATTGAGAAATTCCATGTAGAATTTTGTAGAAACCTTACTACAGCTACCAAGACACATCCCAAATAACGCCTGCCGAGCAGAACTAGGCCAATACCCCCtccaaatatataaaaatacccCCTCCAAATAACAATTGAAAAAATCCATCAAATTCTACAACCACCTGAAAACAAGCGACCCCCATTGTTTCCACTACAAAGCACTACAATACCAAGAGAAACATAGAGAaaagtcccctcagtcagctagCCCTGTGCCTCAGCTCCCTCACCTCACAGCCCCCAGAGCCTCAGGACACCCCCCTCAGCTCCCTCAACTCACAGCCCCCAGAGCCTCAGGACACCACCCTCAGCTCCCTCAACTCACAGCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21457 True 2388 lncRNA 0.36 2 8918024 8920817

Neighbor

gene id symbol gene type direction distance location
atg16l1 atg16l1 coding downstream 37978 8849490 ~ 8880046 (-)
LOC120554459 NA coding downstream 43404 8874341 ~ 8874620 (-)
LOC120554461 NA coding downstream 57384 8860361 ~ 8860640 (-)
LOC120554466 NA coding downstream 63432 8854312 ~ 8854592 (-)
LOC120543840 LOC100693035,LOC101486393,LOC103152962,LOC103475253,LOC106951493 coding downstream 76648 8828413 ~ 8841376 (-)
LOC120543996 NA coding upstream 619 8921436 ~ 8923366 (-)
LOC120551100 NA coding upstream 275170 9195987 ~ 9201417 (-)
LOC120544027 ap2m1,LOC108440593,LOC106580654,LOC106612407 coding upstream 567505 9488322 ~ 9502894 (-)
LOC120551135 LOC101071594,LOC102800178,LOC103356830 coding upstream 603390 9524207 ~ 9531095 (-)
LOC120543835 NA coding upstream 610204 9531021 ~ 9543141 (-)
LOC120544051 NA non-coding downstream 21642 8894784 ~ 8896382 (-)
LOC120544086 NA non-coding downstream 31113 8885926 ~ 8886911 (-)
G15832 NA non-coding downstream 32509 8884856 ~ 8885515 (-)
G15826 NA non-coding downstream 116046 8801446 ~ 8801978 (-)
G15819 NA non-coding downstream 139482 8778030 ~ 8778542 (-)
G15851 NA non-coding upstream 48465 8969282 ~ 8970613 (-)
G15853 NA non-coding upstream 60371 8981188 ~ 9056979 (-)
G15858 NA non-coding upstream 75223 8996040 ~ 9078952 (-)
LOC120544059 NA non-coding upstream 98260 9019077 ~ 9019842 (-)
G15866 NA non-coding upstream 112029 9032846 ~ 9036740 (-)
spint2 NA other downstream 3047 8880438 ~ 8914977 (-)
LOC120544569 dgkd,LOC102780004 other downstream 175901 8692074 ~ 8742123 (-)
G15771 NA other downstream 261061 8601917 ~ 8656963 (-)
G15757 NA other downstream 448264 8468357 ~ 8469760 (-)
LOC120551075 LOC103475274,LOC105922519 other downstream 762721 8137301 ~ 8155303 (-)
G15820 NA other upstream 51097 8971914 ~ 9046433 (-)
LOC120543625 NA other upstream 210167 9130984 ~ 9210517 (-)
G15903 NA other upstream 317150 9237967 ~ 9238784 (-)
eif2a eif2a other upstream 427392 9348209 ~ 9433655 (-)
LOC120551129 NA other upstream 592659 9513476 ~ 9522231 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G2160561 NA non-coding NC_048593.1 CM023247.2 18704110 ~ 18704382 (-)
mexican tetra (Astyanax mexicanus) G286121 NA non-coding NW_019172643.1 APWO02002241.1 47604 ~ 48563 (+)