G15858


Basic Information

Item Value
gene id G15858
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8996040 ~ 9078952 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21490
aagaagaagaaggagattTCTGTTCCTGAAATTAGGATTTTAATATGTGTGgaccacaaacacatcacagtaacttgatgcttttattgtgaaagaccacaaacacatcacagtaactttatgcttttattgtgaaagaccacaaacacatcacagtaactttatgcttttattgtgaaagaacacaaacacatcacagtaacttgatgcttttattgtgaaaagagacagaactcaaaactaaacatgacacaagtcaacggcatttctacaatttgatgattacagcttccatctttaatgaagtttacaatgttcaccaggaatctgttcaatcattctggattattttatacaaagttcattcattagttcataacaataagctgaaatatttctgttagtgtgatcctgtacagactcaactgatcagcagtgagaaacaggaggagactctccgtcctacagaggacacagagacattGAGGAACCAGAACCAGGAGACCTGAGCCCAAACCCAggatagagaggctgagtgaatgtggtgttgaaggtgtagaggtggatcagtgagtcagaggagactgtgtagaaggacagagagccagcaggacagtccacatacactgctactctaccagagacagaggaagaggagatggATGTTCCTCTCTTATTGTGACGGACAGAGTAACCAACATCAGAGCAGaacagactccaggactgatcattacgTCCAAACATACAGTCatcactgtctcctctcctgctgattcctctgtaactcactgatatctcaacccttcctcgcgtctctacctcccagtaacagcgaccagtcagaccatctctacacagcagctgatgatggtagtcaaacctctctggatgatcaggatatggctgatcctcCTCTATCACtaatgtcaccttcctgttgttgtcagacagtttgagttttctgttcactgtgtttgtgtccagtgtgagttcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21490 True 995 lncRNA 0.43 2 8996040 9078952

Neighbor

gene id symbol gene type direction distance location
LOC120543996 NA coding downstream 72674 8921436 ~ 8923366 (-)
atg16l1 atg16l1 coding downstream 115994 8849490 ~ 8880046 (-)
LOC120551100 NA coding upstream 117035 9195987 ~ 9201417 (-)
LOC120544027 ap2m1,LOC108440593,LOC106580654,LOC106612407 coding upstream 409370 9488322 ~ 9502894 (-)
LOC120551135 LOC101071594,LOC102800178,LOC103356830 coding upstream 445255 9524207 ~ 9531095 (-)
LOC120543835 NA coding upstream 452069 9531021 ~ 9543141 (-)
LOC120554346 NA coding upstream 552971 9631923 ~ 9632028 (-)
G15851 NA non-coding downstream 25427 8969282 ~ 8970613 (-)
G15836 NA non-coding downstream 75223 8918024 ~ 8920817 (-)
LOC120544051 NA non-coding downstream 99658 8894784 ~ 8896382 (-)
LOC120544086 NA non-coding downstream 109129 8885926 ~ 8886911 (-)
G15832 NA non-coding downstream 110525 8884856 ~ 8885515 (-)
G15874 NA non-coding upstream 21979 9100931 ~ 9105601 (-)
G15885 NA non-coding upstream 95172 9174124 ~ 9175427 (-)
G15916 NA non-coding upstream 243807 9322759 ~ 9347087 (-)
G15945 NA non-coding upstream 283653 9362605 ~ 9363144 (-)
LOC120544080 LOC108250349,LOC107380983,LOC102776571,LOC108242155 non-coding upstream 307723 9386675 ~ 9397215 (-)
spint2 NA other downstream 81063 8880438 ~ 8914977 (-)
LOC120544569 dgkd,LOC102780004 other downstream 253917 8692074 ~ 8742123 (-)
G15771 NA other downstream 339077 8601917 ~ 8656963 (-)
G15757 NA other downstream 526280 8468357 ~ 8469760 (-)
LOC120551075 LOC103475274,LOC105922519 other downstream 840737 8137301 ~ 8155303 (-)
LOC120543625 NA other upstream 52032 9130984 ~ 9210517 (-)
G15903 NA other upstream 159015 9237967 ~ 9238784 (-)
eif2a eif2a other upstream 269257 9348209 ~ 9433655 (-)
LOC120551129 NA other upstream 434524 9513476 ~ 9522231 (-)
LOC120551163 NA other upstream 597883 9676835 ~ 9710132 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026890 si:ch211-214b16.2 coding NC_007114.7 CM002887.2 60314274 ~ 60316118 (-)