G15874


Basic Information

Item Value
gene id G15874
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9100931 ~ 9105601 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21510
atatctacctgtgcaggtgtgagcagctgtctggtgtgtgtatatatgtattaatatatataatatctaccTGTGCAGGTGTGAGCAGCTGtcggtgtgtgtatatatgtattaatatatataatatctacctgtgcaggtgtgagcagctgtctggtgtgtgtatatatgtattaatatatataatatctaccTGTGCAGGTGTGAGCAGCGCTGtctggtgtgtgtatatatgtattaatatatataatatctacctgtgcaggtgtgagcagctgtctggtgtgtgtatatatgtattaatatatataatatctacctgtgcaggtgtgagcagctgtctggtgtgtgtatatatgtattaatatatataatatctaccTGTACAGGTGTGAGCAGCTGtctggtgtgtgtatatatgtattaatatatataatatctacctgtgcaggtgtgagcagctgtctggtgtgtgtatatatgtattaatatatataatatctacctgtgcaggtgtgagcagctgtctggtgtgtgtatatatgtattaatatatataatatctaccTGTGCAGGTGTGAGCAGCTGTCTGGTGATGGTCCTGTTTGCCTCCGAAGTCAAACTTCACCATCTTTCTCGGCGGATCGCCAACTTCAACGAGGAGAACTTTGTTTTCCAGACGCACAGCGAACGCTACGGCCGCTGCTATTGGCTGTTCCTCCTCGTGGTCCTTCTGCACGCGCTCAACGTCCTGCTGATCCGATTGGCCGGGACGCACTTCCCCTTCCAGGGGGAGAAAGGGGCGGAGCCTAGTGGAGGAGCAGCTGACCTCATGTACTGATAAACACTGGGGGGCACACTTCCCCTCCCAGGGGGAGAAAGGGGCGGAGCCTAGTGGAGGAGCTGCTGACCTCATGTACTGAGACagactttttagacttttgtAGTAAAACTTTAAACTTTTTAGCCCTTTTCTCGAGGCTCTTTCCGAATGTTGTTTGTAGTAAAACTTCTTGTACCACAACTTACAACTTGACACTTGTGACTCTTTCAAAGCGTTTGTCGAAGTTGGATTTTTACACTTTTGAAGCATTTTAGTCATAGACTATAACTGTCtctatagatatagaacaatagactATAACTGTCtctatagatatagaacaatagactGTGACTGTCTCTACAGATATAGAACTATAGACTGTGACTGTCtctatagatatagaacaatagactGTGACTGTCTCTATAGATATAGAACTATAGACTATAACTGTCtctatagatatagaacaatagactGTGACTGTCTCTATAGATATAGAACTATAGACTGTGACTGTCtctatagatatagaacaatagactGTGACTGTCTCTATAGATATAGAACTATAGACTATAACTGTCtctatagatatagaacaatagactGTGACTGTCTCTATAGATATAGAACTATAGACTGTGACTGTCTCTATAGATATAGAACaatagactGTGACTGTCTCTATAGATATAGAACTATAGACTGTGACTGTCTCTATAGATATAGAACTATAGACTATAACTGTCtctatagatatagaacaatagactGTAACTGTCtctatagatatagaacaaaAGACTGTGACTGTGTCTATCGATATAGAACTATAGACTATAGTGCGACtgtgtcgcactgcttgctcttgagggaattactggaattgttggaattgttggggctttgtaaattatagagtgtggtctagacctactctatctgtaaagtgtctcgagataacttatgttatgatttgatactgtaaataaaattgaattgaaaattgaattgactgTCTCtaagatatagaacaatagactGTGACTGtctatagatatagaacaatagactGTGACTGTCtctatagatatagaacaatagactGTGACTGTCTCTATAGATATAGAACTATAGACTATGACTGTCtctatagatatagaacaatagactGTGACTGTCTATAGATATAGAACTATAGACTATGACTGTCtctatGATATAGAACTATAGACTATGAATGTCAATATAGATATAGA
>TU21511
atatctacctgtgcaggtgtgagcagctgtctggtgtgtgtatatatgtattaatatatataatatctaccTGTGCAGGTGTGAGCAGCTGtcggtgtgtgtatatatgtattaatatatataatatctacctgtgcaggtgtgagcagctgtctggtgtgtgtatatatgtattaatatatataatatctaccTGTGCAGGTGTGAGCAGCGCTGtctggtgtgtgtatatatgtattaatatatataatatctacctgtgcaggtgtgagcagctgtctggtgtgtgtatatatgtattaatatatataatatctacctgtgcaggtgtgagcagctgtctggtgtgtgtatatatgtattaatatatataatatctaccTGTACAGGTGTGAGCAGCTGtctggtgtgtgtatatatgtattaatatatataatatctacctgtgcaggtgtgagcagctgtctggtgtgtgtatatatgtattaatatatataatatctacctgtgcaggtgtgagcagctgtctggtgtgtgtatatatgtattaatatatataatatctaccTGTGCAGGTGTGAGCAGCTGTCTGGTGATGGTCCTGTTTGCCTCCGAAGTCAAACTTCACCATCTTTCTCGGCGGATCGCCAACTTCAACGAGGAGAACTTTGTTTTCCAGACGCACAGCGAACGCTACGGCCGCTGCTATTGGCTGTTCCTCCTCGTGGTCCTTCTGCACGCGCTCAACGTCCTGCTGATCCGATTGGCCGGGACGCACTTCCCCTTCCAGGGGGAGAAAGGGGCGGAGCCTAGTGGAGGAGCAGCTGACCTCATGTACTGATAAACACTGGGGGGCACACTTCCCCTCCCAGGGGGAGAAAGGGGCGGAGCCTAGTGGAGGAGCTGCTGACCTCATGTACTGAGACagactttttagacttttgtAGTAAAACTTTAAACTTTTTAGCCCTTTTCTCGAGGCTCTTTCCGAATGTTGTTTGTAGTAAAACTTCTTGTACCACAACTTACAACTTGACACTTGTGACTCTTTCAAAGCGTTTGTCGAAGTTGGATTTTTACACTTTTGAAGCATTTTAGTCATAGACTATAACTGTCtctatagatatagaacaatagactATAACTGTCtctatagatatagaacaatagactGTGACTGTCTCTACAGATATAGAACTATAGACTGTGACTGTCtctatagatatagaacaatagactGTGACTGTCTCTATAGATATAGAACTATAGACTATAACTGTCtctatagatatagaacaatagactGTGACTGTCTCTATAGATATAGAACTATAGACTGTGACTGTCtctatagatatagaacaatagactATGACTGTCTCTATAGATATAGAACaatagattaTCACTGTCTCTATAGATATTGTTTCATCAAAAGACAGGTATTCATAGTCAAGGCATTCACCTTTTCAACTTCTTTCCAAGATAAAACACCAGCAGGGGGCGAGAAAGTGCCTGTACTGTGGAACCCATCATTAGCTTGTGTTTCCCTGGGGAAGATTTATACTGGTGCACCTTTGTGATAGCAGGTGGTGAAATGTTTGGTGAAAAAGCATTTCATAGGAATTCCTTCATGGAAGAGGAGACTCATTCAGACACTTTCAGCTCATTAGGGATTCTGGAGACCCAACCGGTAGGCACGTGGACATTGGTGTGTAAAATTGTTGCCAGTTAAGTTTATTTGTGTTGAGAATTGAGACCAATTGTCTAATTTGATAATTATATTTGGGAAGCAATGATTGATGTCAAGCTACTTGACAattgtttatttgcatattgTATTTGAAATGTATAGTTTCAGTTAATATATTATTACCATAGTGTTTGAAACTTGAGGCGATCTGTGATTGTTTTTGCTGGGAGAAGTTTCTCATGCCATTCATAATATGACTACATTGagattatatatttaatttgaaATGACCTTACTTGAAGTAATGtatatttctttttgtgtttcaCCTTTTTAAAGGTTATCAACCTAACT

Function

GO:

id name namespace
GO:0009069 serine family amino acid metabolic process biological_process
GO:0009070 serine family amino acid biosynthetic process biological_process
GO:1901605 alpha-amino acid metabolic process biological_process
GO:1901607 alpha-amino acid biosynthetic process biological_process
GO:0046394 carboxylic acid biosynthetic process biological_process
GO:0006520 cellular amino acid metabolic process biological_process
GO:0008652 cellular amino acid biosynthetic process biological_process
GO:0006563 L-serine metabolic process biological_process
GO:0006564 L-serine biosynthetic process biological_process
GO:0016053 organic acid biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21510 True 2088 lncRNA 0.46 5 9100931 9105601
TU21511 False 2047 lncRNA 0.50 5 9101843 9105601

Neighbor

gene id symbol gene type direction distance location
LOC120543996 NA coding downstream 177565 8921436 ~ 8923366 (-)
atg16l1 atg16l1 coding downstream 220885 8849490 ~ 8880046 (-)
LOC120551100 NA coding upstream 90386 9195987 ~ 9201417 (-)
LOC120544027 ap2m1,LOC108440593,LOC106580654,LOC106612407 coding upstream 382721 9488322 ~ 9502894 (-)
LOC120551135 LOC101071594,LOC102800178,LOC103356830 coding upstream 418606 9524207 ~ 9531095 (-)
LOC120543835 NA coding upstream 425420 9531021 ~ 9543141 (-)
LOC120554346 NA coding upstream 526322 9631923 ~ 9632028 (-)
G15867 NA non-coding downstream 18377 9042283 ~ 9082554 (-)
G15858 NA non-coding downstream 21979 8996040 ~ 9078952 (-)
G15853 NA non-coding downstream 43952 8981188 ~ 9056979 (-)
G15866 NA non-coding downstream 64191 9032846 ~ 9036740 (-)
LOC120544059 NA non-coding downstream 81089 9019077 ~ 9019842 (-)
G15885 NA non-coding upstream 68523 9174124 ~ 9175427 (-)
G15916 NA non-coding upstream 217158 9322759 ~ 9347087 (-)
G15945 NA non-coding upstream 257004 9362605 ~ 9363144 (-)
LOC120544080 LOC108250349,LOC107380983,LOC102776571,LOC108242155 non-coding upstream 281074 9386675 ~ 9397215 (-)
G15947 NA non-coding upstream 296196 9401797 ~ 9402704 (-)
G15820 NA other downstream 54498 8971914 ~ 9046433 (-)
spint2 NA other downstream 185954 8880438 ~ 8914977 (-)
LOC120544569 dgkd,LOC102780004 other downstream 358808 8692074 ~ 8742123 (-)
G15771 NA other downstream 443968 8601917 ~ 8656963 (-)
G15757 NA other downstream 631171 8468357 ~ 8469760 (-)
LOC120543625 NA other upstream 25383 9130984 ~ 9210517 (-)
G15903 NA other upstream 132366 9237967 ~ 9238784 (-)
eif2a eif2a other upstream 242608 9348209 ~ 9433655 (-)
LOC120551129 NA other upstream 407875 9513476 ~ 9522231 (-)
LOC120551163 NA other upstream 571234 9676835 ~ 9710132 (-)

Expression


Co-expression Network