LOC120551163


Basic Information

Item Value
gene id LOC120551163
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9676835 ~ 9710132 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21566
ccacacattggacGAGCCTGCCTTTGTTCAAGTTCAATCAAACTAACGAGAAAGGGAGGAGTCGAACCAAAACACGGTTTCTTCAATTGGCTCTCTAATTTCCCTAGTTGCTGTTATCAtattcttatttattatttgagaAGCTTTCGCCGCCAAACGAGAAGTTCTGGCAGTAGAGCTGACTGCAACTAATGAAGAggac
>XM_039788379.1
ACTAAAATTCACTTTGGAATTATGTTCGTAGGAGTAAACCTAACGTTCTTTCTCCTTGGAGACGACCAGATTTATAACGTAATTGTTACAGCACATTCGAACCAAAACACGGTTTCTTCAATTGGCTCTCTAATTTCCCTAGTTGCTGTTATCAtattcttatttattatttgagaAGCTTTCGCCGCCAAACGAGAAGTTCTGGCAGTAGAGCTGACTGCAACTAATGAAGAggacttaaaTGCcgtgtag

Function

GO:

id name namespace
GO:0006091 generation of precursor metabolites and energy biological_process
GO:0034220 ion transmembrane transport biological_process
GO:0015672 monovalent inorganic cation transport biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0044425 obsolete membrane part cellular_component
GO:0005739 mitochondrion cellular_component
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21566 False 202 lncRNA 0.43 2 9680421 9710132
XM_039788379.1 True 252 mRNA 0.38 3 9676835 9680842

Neighbor

gene id symbol gene type direction distance location
LOC120554346 NA coding downstream 44807 9631923 ~ 9632028 (-)
LOC120543835 NA coding downstream 133694 9531021 ~ 9543141 (-)
LOC120551135 LOC101071594,LOC102800178,LOC103356830 coding downstream 145740 9524207 ~ 9531095 (-)
LOC120544027 ap2m1,LOC108440593,LOC106580654,LOC106612407 coding downstream 173941 9488322 ~ 9502894 (-)
LOC120551100 NA coding downstream 475418 9195987 ~ 9201417 (-)
dharma NA coding upstream 137866 9847998 ~ 9851668 (-)
zgc:162698 tmem87a,LOC101066087 coding upstream 443759 10153891 ~ 10178798 (-)
LOC120551203 NA coding upstream 517096 10227228 ~ 10248071 (-)
LOC120551206 NA coding upstream 547479 10257611 ~ 10342658 (-)
LOC120574326 NA coding upstream 632250 10342382 ~ 10352839 (-)
G15953 NA non-coding downstream 7369 9555004 ~ 9669466 (-)
G15933 NA non-coding downstream 21175 9600552 ~ 9655660 (-)
G15961 NA non-coding downstream 33237 9643318 ~ 9643598 (-)
G15944 NA non-coding downstream 39814 9636730 ~ 9637021 (-)
G15958 NA non-coding downstream 47230 9625844 ~ 9629605 (-)
G15977 NA non-coding upstream 43021 9753153 ~ 9969138 (-)
G15982 NA non-coding upstream 58773 9768905 ~ 9775375 (-)
G15983 NA non-coding upstream 58887 9769019 ~ 9805899 (-)
G15996 NA non-coding upstream 230548 9940680 ~ 9965528 (-)
G15978 NA non-coding upstream 248417 9958549 ~ 9961609 (-)
LOC120551129 NA other downstream 154604 9513476 ~ 9522231 (-)
eif2a eif2a other downstream 243180 9348209 ~ 9433655 (-)
G15903 NA other downstream 438051 9237967 ~ 9238784 (-)
LOC120543625 NA other downstream 466318 9130984 ~ 9210517 (-)
G15820 NA other downstream 630402 8971914 ~ 9046433 (-)
G16066 NA other upstream 426556 10136688 ~ 10138347 (-)
G16064 NA other upstream 430044 10140176 ~ 10149571 (-)
LOC120574297 NA other upstream 473871 10184003 ~ 10201584 (-)
LOC120574316 NA other upstream 608702 10318834 ~ 10330847 (-)
G16143 LOC103372137,LOC102304476 other upstream 663436 10373568 ~ 10424770 (-)

Expression


Co-expression Network