LOC120551129


Basic Information

Item Value
gene id LOC120551129
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9513476 ~ 9522231 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21571
ACGCATCAGCAGGAGGGCGCCGGCACGACCACGGGCGCCACCGCCGCCGCGCCGCAGAGACTCCGGCGCTGCAGAGTCTGCGGCGACGCCTACAGGACGAGGAGCGCCCTGCTGAAACACGCCGAGACACACCTACAGGACGCCGAGGCCGGTCTCCTCTGCGGTCTCTGTGGTCATCAGTACGACTCGGCCGCGGCCCTCTCCTCCCACCTCCTGTCCCACCACAGCGAGCTCGCCAACACGTGTCACGTGTGCGGTAAGAGCTTCCCGGCGGCCGCGGCGCTGCTGATGCACCTGCGCGTCCACAGCGGCGAGAAGCCGTTCGGCTGCGGCGTCTGCGGCAAACGCTTCAACCAGAGCGGGAACCTGAAGACGCACGCCAAGATCCACAGCGGCGAGAAGCCGTTCAGCTGCGGCGTCTGCGGGAAACGCTTCACGCAGAAACAGACGCTGCGCACGCACGAACGCTTCCACAACAAAGAGCGCCGCTTCCTGTGTCAGGTGTGCGGGAAGGGCTTCATGCAGGAAGTGGACCTGAAGAGACACATCCTGATCCACACCGCGAGAAG
>XM_039788319.1
CTCGACGCGGAACTGTCCCTGTGTCCCTCCGCGGGCCCTGGATGTATCCCTCCGCGGGCCCTGGATGTGTCCCTCCGCGGGCCCCGGATGTGTCCGCTGCGGCCTCTCCGGCTCTCTTTGTCCGCAGAAAAAAAGCACCGAGATGCGCGCGTGTGTGCACCTGCTGCGGGTGACGGTCCACGAGCGGATCCTCGCGGCCGCCGAAGACTTTCTGCTGCGGCTGGAgaaaggagcagcagcagcagcagaagaagaagaagcgtCAGACAGGCCGCGGCTGAGAGCGCTGCTCACCGAGCGGCTCTCGGCGGCCGCGGAGGAGATCATCGCCCTGCTGGAGGAGACCGTGGCGGGGTACGAAGACAGAGCTGAGCGCTCCGAGCAGGAGATCTCCCGCCAGAGGAGGCTGCTCGAGGCCGTGCTGGAGCCGGAGGTCCGGCTGCACAGAGCGGAGTTTCTGCAGAAGAAGAGAGGACCCCCAGAGTCTCTGCAGAAGAAGAGAGGACCCCCAGAGTCTCGTGTCAGCGCTGAAGAAAACGCGTCTGAAGCCCAACGTGTCGACAACGAAGCCTCCTGCCCGGCAAcgcctgcctcctcctccccccaccccccccccgctGACTCTCCCCCCGCCTCCCCGAGCAGCGACAGTGACCACGACGACGATGActggaccaatcagagccgGGCTGCCACGCCTCataagaggaggaagagaggacgCCCGCCGCTCGCCGTCACACGGGACAAACAGTTTCTGCAGAAGAAGAGAGGACGCCCGCCGCTCGCCGTCACACGGGACCATCTGAACAAGCGTAGACGACCGGCATCGCCGCCGCAGAGCTTCAGCTGCCACGTGTGTCAGCGCTCGCTGCCGGGGAAAGGCTTCCTGCTGCGACACGTCCTGCAGGCCTGCGCCGGGGACGCGGCCGGCGCCCGCTGCGGCTTCTGCGGCGAGCTTCTGAGCTCGCCGACCGAACTGCCGGCTCACCTGCAGACGCACCGCGACGGCTGCCGAACCTGCCCGTTCTGCGGCAAGCGCTTCGGCTCCATCCTGGCGCGGGAGCTCCACGAGCGCCGGCACACGGGAGAGAAACCCTACAGCTGCGACGTCTGCGGGAGGACTTTCAGCCAGAAGGGAAACCTGGCGTCGCACGCCCGCGTGCACGCCGCCGAGAAGCCGTTCACGTGCACGGAGTGCGGCCGCGGCTTCTGCCACCGCACGTCGCTGGAGCGCCACGCGGAAGCACGCGGCGGCGGCGTTGCCCACTCGCGGCGTGGGGAGGTTCGGTCAACGCGCCCGCGGCGGAGACAACGCGGTACGCATCAGCAGGAGGGCGCCGGCACGACCACGGGCGCCACCGCCGCCGCGCCGCAGAGACTCCGGCGCTGCAGAGTCTGCGGCGACGCCTACAGGACGAGGAGCGCCCTGCTGAAACACGCCGAGACACACCTACAGGACGCCGAGGCCGGTCTCCTCTGCGGTCTCTGTGGTCATCAGTACGACTCGGCCGCGGCCCTCTCCTCCCACCTCCTGTCCCACCACAGCGAGCTCGCCAACACGTGTCACGTGTGCGGTAAGAGCTTCCCGGCGGCCGCGGCGCTGCTGATGCACCTGCGCGTCCACAGCGGCGAGAAGCCGTTCGGCTGCGGCGTCTGCGGCAAACGCTTCAACCAGAGCGGGAACCTGAAGACGCACGCCAAGATCCACAGCGGCGAGAAGCCGTTCAGCTGCGGCGTCTGCGGGAAACGCTTCACGCAGAAACAGACGCTGCGCACGCACGAACGCTTCCACAACAAAGAGCGCCGCTTCCTGTGTCAGGTGTGCGGGAAGGGCTTCATGCAGGAAGTGGACCTGAAGAGACACATCCTGATCCACACCGCGAGAAGTCATGCCGCTCGCCGGCGGCAACGCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21571 False 569 TUCP 0.66 3 9513504 9517970
XM_039788319.1 True 1918 mRNA 0.68 5 9513476 9522231

Neighbor

gene id symbol gene type direction distance location
LOC120544027 ap2m1,LOC108440593,LOC106580654,LOC106612407 coding downstream 10582 9488322 ~ 9502894 (-)
LOC120551100 NA coding downstream 312059 9195987 ~ 9201417 (-)
LOC120543996 NA coding downstream 590110 8921436 ~ 8923366 (-)
LOC120554459 NA coding downstream 638856 8874341 ~ 8874620 (-)
LOC120554461 NA coding downstream 652836 8860361 ~ 8860640 (-)
LOC120551135 LOC101071594,LOC102800178,LOC103356830 coding upstream 1976 9524207 ~ 9531095 (-)
LOC120543835 NA coding upstream 8790 9531021 ~ 9543141 (-)
LOC120554346 NA coding upstream 109692 9631923 ~ 9632028 (-)
dharma NA coding upstream 325767 9847998 ~ 9851668 (-)
zgc:162698 tmem87a,LOC101066087 coding upstream 631660 10153891 ~ 10178798 (-)
G15930 NA non-coding downstream 68397 9437762 ~ 9445079 (-)
G15928 NA non-coding downstream 74634 9411493 ~ 9438842 (-)
G15947 NA non-coding downstream 110772 9401797 ~ 9402704 (-)
LOC120544080 LOC108250349,LOC107380983,LOC102776571,LOC108242155 non-coding downstream 116261 9386675 ~ 9397215 (-)
G15945 NA non-coding downstream 150332 9362605 ~ 9363144 (-)
G15952 NA non-coding upstream 23348 9545579 ~ 9585942 (-)
G15953 NA non-coding upstream 32773 9555004 ~ 9669466 (-)
G15933 NA non-coding upstream 78321 9600552 ~ 9655660 (-)
G15958 NA non-coding upstream 103613 9625844 ~ 9629605 (-)
G15944 NA non-coding upstream 114499 9636730 ~ 9637021 (-)
eif2a eif2a other downstream 79821 9348209 ~ 9433655 (-)
G15903 NA other downstream 274692 9237967 ~ 9238784 (-)
LOC120543625 NA other downstream 302959 9130984 ~ 9210517 (-)
G15820 NA other downstream 467043 8971914 ~ 9046433 (-)
spint2 NA other downstream 598499 8880438 ~ 8914977 (-)
LOC120551163 NA other upstream 154604 9676835 ~ 9710132 (-)
G16066 NA other upstream 614457 10136688 ~ 10138347 (-)
G16064 NA other upstream 617945 10140176 ~ 10149571 (-)
LOC120574297 NA other upstream 661772 10184003 ~ 10201584 (-)
LOC120574316 NA other upstream 796603 10318834 ~ 10330847 (-)

Expression


Co-expression Network