G15953


Basic Information

Item Value
gene id G15953
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9555004 ~ 9669466 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21620
atacacgcacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaccacacacacacacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacagacagacagacagacagacacacacacacacacacacacacacacacacacagacacacacaaacacacacagacagacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacagacacacacacacacagacacacacacacacacacacacagacacacacacacacacacacagaaacacacacacacacagacacacacacacacacacagacacacacacagac
>TU21621
acacacacacacacacacacggctcacatacaacacacacagacagacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacagacacacacacacacagacacacacacacacacacacacagacacacacacacacacacacagaaacacacacacacacagacacacacacacacacacacacagacacacacacacacacacacagaacacacacacacacacatctgaaccccaccacacacacacacacacacacacacacacacacacacacacacacacacacacacactctgt
>TU21622
cacagagacacacatacacacacacagagacacacacacacatacacacacacacacacacacacacagagacacacacacacacacacacacacacacacacaggcacagagacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacagacacacacacacacagacacacacacacacacacacacagacacacacacacacacacacagaaacacacacacacacagacacacacacacacacacagacacacacacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21620 True 486 lncRNA 0.50 3 9555004 9669466
TU21621 False 340 lncRNA 0.40 2 9598551 9599226
TU21622 False 303 lncRNA 0.47 4 9555004 9615438

Neighbor

gene id symbol gene type direction distance location
LOC120543835 NA coding downstream 11863 9531021 ~ 9543141 (-)
LOC120551135 LOC101071594,LOC102800178,LOC103356830 coding downstream 23909 9524207 ~ 9531095 (-)
LOC120544027 ap2m1,LOC108440593,LOC106580654,LOC106612407 coding downstream 52110 9488322 ~ 9502894 (-)
LOC120551100 NA coding downstream 353587 9195987 ~ 9201417 (-)
LOC120543996 NA coding downstream 631638 8921436 ~ 8923366 (-)
dharma NA coding upstream 178532 9847998 ~ 9851668 (-)
zgc:162698 tmem87a,LOC101066087 coding upstream 484425 10153891 ~ 10178798 (-)
LOC120551203 NA coding upstream 557762 10227228 ~ 10248071 (-)
LOC120551206 NA coding upstream 588145 10257611 ~ 10342658 (-)
LOC120574326 NA coding upstream 672916 10342382 ~ 10352839 (-)
G15942 NA non-coding downstream 40013 9514341 ~ 9514991 (-)
G15939 NA non-coding downstream 40836 9507052 ~ 9514168 (-)
G15930 NA non-coding downstream 109925 9437762 ~ 9445079 (-)
G15928 NA non-coding downstream 116162 9411493 ~ 9438842 (-)
G15947 NA non-coding downstream 152300 9401797 ~ 9402704 (-)
G15966 NA non-coding upstream 17946 9687412 ~ 9777378 (-)
G15977 NA non-coding upstream 83687 9753153 ~ 9969138 (-)
G15982 NA non-coding upstream 99439 9768905 ~ 9775375 (-)
G15983 NA non-coding upstream 99553 9769019 ~ 9805899 (-)
G15996 NA non-coding upstream 271214 9940680 ~ 9965528 (-)
LOC120551129 NA other downstream 32773 9513476 ~ 9522231 (-)
eif2a eif2a other downstream 121349 9348209 ~ 9433655 (-)
G15903 NA other downstream 316220 9237967 ~ 9238784 (-)
LOC120543625 NA other downstream 344487 9130984 ~ 9210517 (-)
G15820 NA other downstream 508571 8971914 ~ 9046433 (-)
LOC120551163 NA other upstream 7369 9676835 ~ 9710132 (-)
G16066 NA other upstream 467222 10136688 ~ 10138347 (-)
G16064 NA other upstream 470710 10140176 ~ 10149571 (-)
LOC120574297 NA other upstream 514537 10184003 ~ 10201584 (-)
LOC120574316 NA other upstream 649368 10318834 ~ 10330847 (-)

Expression


Co-expression Network