G15958


Basic Information

Item Value
gene id G15958
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9625844 ~ 9629605 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21629
GTTTGTGATGCCATGCGAGGCTTTATGAAACACATTCCCAGTATATAGAAATAACCACAAgactccatcatcatcatcatcatcatcatcatcatcaccatcatcatcatcatcatcatcatcatcatcaccatcatcatcatgcaGAGCTCACAGGAatcacatcagctgtttaatttataacaaaaataatcacACGACAGATTCAGACTGCTGATACAAAGGCTTCGTTACCAAAAAGCTGCTTTTACAAAAAGGCCACGAAATAGAAATACAAATTCAAATATATACGATACGATTAAACTCTTTATCTGTTATCGTGAGGAAAGTACAAAGCTCAAAGAGTGCACGTATAcgtttaaaaggtgctctaagccaTGTTGggtgagatgttttttacagcgtgttcaggggacaggtagctagcagatagtgagatattttttacagcgtgttcaggggacaggtagctagcagatagtgagatattttttacagtgtgttcaggggacaggtagctagcagatagtgagatattttttacagtgtgttcaggggacaggcagctagcagatagtgaggagatgtgtTCAAAGCAGCCAAAAGTGTAGGAAATAGAAACAATCCTGAAACAAAAtcgtgcatgtgtctgtgcgAAGGGAGTGCTTGTGGGTGTGTGCAAAAATACGTGGGAAGTTATGGAAATATGTGCAAACTATCTGTTCTCATGCACATTCTCAACACTAGAACAGCCATGACGCTCATTTTGACTGTTTTTGAAAtttcaacctgatctcacagaaatctgtgaaatgaacacggcccatTAAAGCACCCATGTTATGctgattttcaggttcataattgtattttaaggttgtaccagaataggtttacatggtttaattatcaaaaaacaccatattttagttgtactgcacattgctgcagctcctcttttcaccctgtgttcaggtctctgttttagctacagagtgagacctcttttcttcttctgtactatctttgattgcactcgcacatgctcagtagctcagatcgtagatcatgccagctagctccatagacagtaaaagaaaggctgtttctccaacttcagtcagttccaaggcaggatcagctgggagacttcttctaaaccagggagcacatggaagtagttcttttggtagattatggtgaacttgtgtgtgttgtagcagtgctttgctattgagaacaaggtagcatgctagcgttagccgctagcatgctaacggttgcggttagccagctcgtttctagtgccgtagaaagctgtgcagatgttgaccagctcaccaggagactgaaggcaggacacattcagaaaccagatctcactcagaacaccatggatggatgctttttcaaagtgtgtatgtgtgtggaagcaccagagacacaaaataactccccaaatcaccagaaaaaagtgatttttttcataatatgggcactttaaactctcgccaaaatgcaacctaggctctttttgtgaatgtacccgagtcaaagtttcctttaaaagcataattaaaGACGTtgagcgccacttttaagatttaccggagactgatctcataaaagAGACGTATGTATGACACACCAATTCGTTTTGcgcgttatcaagacgcataatcactttttagcgtgtttatcaacgccgttcggccgccatGGACTTACATTACGTGTGAGTTTTCGCCATAGCGATGTAGTATGACAGGACGTAAGTCTGCACAGATAGGCTGGttgtggtggtggatgggtaaaacacaggactttcacccaggagaagccttccccaatgttttctttcctaaacccaaccgttagTAGATAGTACGGTACGTTCTTGCGATAAGACGCCACGTGGCAACGCCTCAAAACCAGCGCtaattggtcggtcgtttggcgaacggctccaaatgttctctatctcaagatgccagacctGATCTgggagtggaaaactggagctcgccagatcaggacggtccCATGAGgctactactcgctaccgtagtcgctcttaatgctaggtcatcttctcattgactttacattggcgtTGTTTTTCCGTTTTCACGTAATGCGCAAAATGGTTCACGATCATTTCATGGatttctgtgagaccaggctgtgaaatttatatgtgtaataacttttcTGAATAACAAAAgacaatcctgctggtacctgacaTTTCCAAAAAGACACtatatattcatttaaaatagtttttatacacattacacaaaatgcaaagaaaataaACTTTTACCTAACTTGGTCATATCGACCGCTTGCATTTTTCGAggtattgtttttaatcttttgcctGGTTGAAGATGTATattggttgcttagtaactaTCATCGTCTCTGAGCgtgggcatcaccgatgggcccCAAAGCAAAGCCAGACTCGGTTACACAATACATGCATTGATATGACAATTAGGTATTTATCATGAGAGATTATAGAGGTTGGAATCTGGCAATTCTAATATTAACCCTTctgttgtctttgggtcaagtctgacccattttcaaaaagtttctctatcagaaatgtgggtttctttcaaccaaattgacCCAAAATGACATGggtggttccctacaacgctcctcacaagttaaatacatactcagttcactactttcattgaatttgggtgctttagtcaattttatagcatgtgaagaaaaattaatgaaacaactttgaaaaacgtagaaaaaaaatgtcaaaaacatcagaaaagtgacaaaaaacgtggaaaaaagtcaaaaaaaatcttcaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21629 True 2855 lncRNA 0.40 3 9625844 9629605

Neighbor

gene id symbol gene type direction distance location
LOC120543835 NA coding downstream 82703 9531021 ~ 9543141 (-)
LOC120551135 LOC101071594,LOC102800178,LOC103356830 coding downstream 94749 9524207 ~ 9531095 (-)
LOC120544027 ap2m1,LOC108440593,LOC106580654,LOC106612407 coding downstream 122950 9488322 ~ 9502894 (-)
LOC120551100 NA coding downstream 424427 9195987 ~ 9201417 (-)
LOC120543996 NA coding downstream 702478 8921436 ~ 8923366 (-)
LOC120554346 NA coding upstream 2318 9631923 ~ 9632028 (-)
dharma NA coding upstream 218393 9847998 ~ 9851668 (-)
zgc:162698 tmem87a,LOC101066087 coding upstream 524286 10153891 ~ 10178798 (-)
LOC120551203 NA coding upstream 597623 10227228 ~ 10248071 (-)
LOC120551206 NA coding upstream 628006 10257611 ~ 10342658 (-)
G15952 NA non-coding downstream 39902 9545579 ~ 9585942 (-)
G15942 NA non-coding downstream 110853 9514341 ~ 9514991 (-)
G15939 NA non-coding downstream 111676 9507052 ~ 9514168 (-)
G15930 NA non-coding downstream 180765 9437762 ~ 9445079 (-)
G15928 NA non-coding downstream 187002 9411493 ~ 9438842 (-)
G15944 NA non-coding upstream 7125 9636730 ~ 9637021 (-)
G15961 NA non-coding upstream 13713 9643318 ~ 9643598 (-)
G15966 NA non-coding upstream 57807 9687412 ~ 9777378 (-)
G15977 NA non-coding upstream 123548 9753153 ~ 9969138 (-)
G15982 NA non-coding upstream 139300 9768905 ~ 9775375 (-)
LOC120551129 NA other downstream 103613 9513476 ~ 9522231 (-)
eif2a eif2a other downstream 192189 9348209 ~ 9433655 (-)
G15903 NA other downstream 387060 9237967 ~ 9238784 (-)
LOC120543625 NA other downstream 415327 9130984 ~ 9210517 (-)
G15820 NA other downstream 579411 8971914 ~ 9046433 (-)
LOC120551163 NA other upstream 47230 9676835 ~ 9710132 (-)
G16066 NA other upstream 507083 10136688 ~ 10138347 (-)
G16064 NA other upstream 510571 10140176 ~ 10149571 (-)
LOC120574297 NA other upstream 554398 10184003 ~ 10201584 (-)
LOC120574316 NA other upstream 689229 10318834 ~ 10330847 (-)

Expression


Co-expression Network