G15977


Basic Information

Item Value
gene id G15977
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9753153 ~ 9969138 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21650
TACCGGCTGACGGATGAGCTCATTTCAGGAAACGAGGAGAAAGTCCAATCACGTCCAATCCGGTTAACGGTGGAAATAAACCGACTCACAGATTCAGAAGCACTCCCGGTTGTGGGCCCGTAATCGGCTGCTGATAGGCTAAGAGCCGAGTGATAAAACTCATCTGCAGACGTGAATCAGCTTCAGACTGCagcaagaaaaacacacacacacacacacacacaacccagaGACCGGAGAGCGCCGGGAAACACGGATCTACCTGTTTGCAGAAAGCCACGCCCCCTCtgagcgcgcgcacacacacacacacacacacacacagacagacagacagacagacagacagacagacagacacacacacacacacacacacagacagacagacagacacacagacagacagacagacacacacacacacacacacacacacacagacagacacagacacacacacagacagacagacagacagacagacacacacacacacacacacacacacacacagacagacagacagacagacagacagacaga
>TU21651
acacacacagacacacacacacagacacagacagacacacagacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacagacagacacacagacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacagacacagacacacacacacacacagacacacacacacacagacacacacacacacacagacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacagacacagacacacacacacagacacacagacacacacacacacacagacacacacacacacacacacacacacacacagacacacacacacacacacacagagtaatacacagagacacacacacacagag
>TU21652
acacacacagacacacacacacagacacagacagacacacagacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacagacagacacacagacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacagacacagacacacacacacacacagacacacacacacacagacacacacacacacacagacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacagacacagacacaacacagacagacacacagacacacacagacacacaaacacagacagacacacacacagacagaacacacacagacacacacacagacagacacacacacacagacagacagacacacagacacacacacacacagacagacacacacacacagacagacacacacacagacacacacacagacagacacacacacacacagacacacacacacacacacacacagacagacagacagacacagacagacagacagacagacacacacacacacacacagacagacagacagacagacagacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacagacagacacacacacacagacagacacacacacacacacacacacagacacacacacacaaacacaca
>TU21653
gaattatgtacttaacaaaaaaagtgtgaaataactgaaaacatgtcttatattttagattcttcaaagtagccaccctttgcacacacacacacacacacacacagacacagacacacacacacacacacacacacacagacacacacacacacacacacacacacagacacagacacacacacacacacacacacacagacacagacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacagacacaaacacacacacacacacacacagacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacaaatacacacacacacacagacacacacacacacacacaaatacacacacacacacac
>TU21654
gaattatgtacttaacaaaaaaagtgtgaaataactgaaaacatgtcttatattttagattcttcaaagtagccaccctttgcacacacacacacacacacacacagacacagacacacacacacacacacacacacacagacacacacacacacacacacacacacagacacagacacacacacacacacacacacacagacacagacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacagacacaaacacacacacacacacacacagacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacaaatacacacacacacacagacacacacacacacacacacacagatacacacagacagacacacacacacacacacacacacacacagacagacagacagacacacacacacacacacacacacacacagacacacacacacacagacacacacacacacagacacacacacagagacacacacacagacacacacacacttgtcgcTGGTTGTTTCCCCAcatctataaatatatatacataattcaGCATCTTTTGTTTTAGACACCTGTAAAGGAAACTGATTACATGATAGTGAGCCTGAGGTGTGAAAGTTTCATATGAAGGTGAGATAAACAAGTCATgttctttaga
>TU21656
gaattatgtacttaacaaaaaaagtgtgaaataactgaaaacatgtcttatattttagattcttcaaagtagccaccctttgcacacacacacacacacacacacagacacagacacacacacacacacacacacacacagacacacacacacacacacacacacacagacacagacacacacacacacacacacacacagacacagacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacagacacaaacacacacacacacacacacagacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacaaatacacacacacacacagacacacacacacacacacacacagatacacacagacagacacacacacacacacacacacacacacagacagacagacagacacacacacacacacacacacacacacacagacagacagacagacagacagacaaacagacagacagacagacagacacacacacagacagacagacagacagacagacacacacacacacacagacagacagacagacagacagacacacacacacacacacacacacacacacagacagacagacagacagacagacagacaga
>TU21657
acacacacagacacacacacacagacacagacagacacacagacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacagacagacacacagacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacagacacagacacacacacacacacagacacacacacacacagacacacacacacacacagacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacagacacagacacaacacagacagacacacagacacacacagacacacaaacacagacagacacacacacagacagaacacacacagacacacacacagacagacacacacacacagacagacagacacacacacacagacagacagacacacagacagacagacagacacacacacagacagacacacacacagacagacagacagacacacacacacacacagacagacagacagacagacagacacacacacacacacacacacacacacagacagacagacagacacacacacacacacacacacacacacacagacagacagacagacagacagacaaacagacagacagacagacagacacacacacagacagacagacagacagacagacacacacacacacacacacagacagacacacacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21650 False 546 lncRNA 0.42 4 9866844 9895794
TU21651 False 492 lncRNA 0.50 2 9961285 9969138
TU21652 True 801 lncRNA 0.38 5 9753153 9969138
TU21653 False 435 lncRNA 0.44 2 9887622 9944527
TU21654 False 731 lncRNA 0.36 5 9844989 9944527
TU21656 False 684 lncRNA 0.38 3 9866844 9944527
TU21657 False 797 lncRNA 0.42 4 9853048 9969138

Neighbor

gene id symbol gene type direction distance location
LOC120554346 NA coding downstream 121125 9631923 ~ 9632028 (-)
LOC120543835 NA coding downstream 210012 9531021 ~ 9543141 (-)
LOC120551135 LOC101071594,LOC102800178,LOC103356830 coding downstream 222058 9524207 ~ 9531095 (-)
LOC120544027 ap2m1,LOC108440593,LOC106580654,LOC106612407 coding downstream 250259 9488322 ~ 9502894 (-)
LOC120551100 NA coding downstream 551736 9195987 ~ 9201417 (-)
zgc:162698 tmem87a,LOC101066087 coding upstream 184753 10153891 ~ 10178798 (-)
LOC120551203 NA coding upstream 258090 10227228 ~ 10248071 (-)
LOC120551206 NA coding upstream 288473 10257611 ~ 10342658 (-)
LOC120574326 NA coding upstream 373244 10342382 ~ 10352839 (-)
si:cabz01090165.1 LOC100707198,LOC102192222 coding upstream 523977 10493115 ~ 10567391 (-)
G15953 NA non-coding downstream 83687 9555004 ~ 9669466 (-)
G15933 NA non-coding downstream 97493 9600552 ~ 9655660 (-)
G15961 NA non-coding downstream 109555 9643318 ~ 9643598 (-)
G15944 NA non-coding downstream 116132 9636730 ~ 9637021 (-)
G15958 NA non-coding downstream 123548 9625844 ~ 9629605 (-)
G16004 NA non-coding upstream 35358 10004496 ~ 10004722 (-)
G16017 NA non-coding upstream 124435 10093573 ~ 10093980 (-)
G16023 NA non-coding upstream 153469 10122607 ~ 10122813 (-)
G16026 NA non-coding upstream 157770 10126908 ~ 10127408 (-)
G16027 NA non-coding upstream 159948 10129086 ~ 10129763 (-)
LOC120551163 NA other downstream 43021 9676835 ~ 9710132 (-)
LOC120551129 NA other downstream 230922 9513476 ~ 9522231 (-)
eif2a eif2a other downstream 319498 9348209 ~ 9433655 (-)
G15903 NA other downstream 514369 9237967 ~ 9238784 (-)
LOC120543625 NA other downstream 542636 9130984 ~ 9210517 (-)
G16066 NA other upstream 167550 10136688 ~ 10138347 (-)
G16064 NA other upstream 171038 10140176 ~ 10149571 (-)
LOC120574297 NA other upstream 214865 10184003 ~ 10201584 (-)
LOC120574316 NA other upstream 349696 10318834 ~ 10330847 (-)
G16143 LOC103372137,LOC102304476 other upstream 404430 10373568 ~ 10424770 (-)

Expression


Co-expression Network