G16048


Basic Information

Item Value
gene id G16048
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 10188963 ~ 10195210 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21744
gagcaggtgagtcCGGCAGCTTTGCCAGAAGGGCAGGTGTTGCTAGCTGAGCTGTCACAGTCCAGCAGAGAAGACTCATGGCCTCTACACTGGAACTGtttggtccacactggagcctCCATGTCTCCATAGAGTGCCCCCTGGAGGACTGAAGGAGCCCCACATTCAAGCTCCCTGCAGACCACCTCTGCATCCTGCAGGTCAAAGTCatcttcacacactgaggaccacGACTGGGTAGACTGGTTAGACTTCACCTCCAGTCTGCCTGAACACAGACTAGTCCCATTCACCAGCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21744 True 300 lncRNA 0.56 2 10188963 10195210

Neighbor

gene id symbol gene type direction distance location
si:ch211-137a8.4 LOC103372141,LOC107102523,LOC105915351,LOC101172006,LOC106961384,LOC103378353 coding upstream 69124 10055994 ~ 10119839 (+)
trnar-ucu_11 NA coding upstream 304359 9884513 ~ 9884604 (+)
trnar-ucu_10 NA coding upstream 319039 9869833 ~ 9869924 (+)
clip3 clip3 coding upstream 391237 9750631 ~ 9797726 (+)
LOC120547748 LOC100707466,LOC102206406,LOC103373746,LOC101483620,LOC102290800 coding upstream 563182 9603260 ~ 9625781 (+)
LOC120550666 LOC105915347 coding downstream 164179 10359389 ~ 10376811 (+)
LOC120548947 LOC103372137,LOC102304476 coding downstream 209979 10405189 ~ 10424770 (+)
LOC120547173 NA coding downstream 239275 10434485 ~ 10445489 (+)
LOC120551211 NA coding downstream 260547 10455757 ~ 10464353 (+)
LOC120551226 NA coding downstream 781995 10977205 ~ 10979429 (+)
G16044 NA non-coding upstream 3278 10183693 ~ 10185685 (+)
G16033 NA non-coding upstream 22494 10139003 ~ 10166469 (+)
G16031 NA non-coding upstream 53232 10135508 ~ 10135731 (+)
G15727 NA non-coding upstream 184234 10004511 ~ 10004729 (+)
G15723 NA non-coding upstream 222359 9965892 ~ 9966604 (+)
G16101 NA non-coding downstream 192462 10387672 ~ 10387988 (+)
G16103 NA non-coding downstream 198210 10393420 ~ 10393970 (+)
G16115 NA non-coding downstream 306321 10501531 ~ 10553760 (+)
G16125 NA non-coding downstream 464643 10659853 ~ 10660419 (+)
G16171 NA non-coding downstream 821165 11016375 ~ 11016658 (+)
G15712 NA other upstream 185368 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 185591 9866710 ~ 10003372 (+)
G15640 NA other upstream 519434 9598313 ~ 9669529 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other downstream 193022 10388232 ~ 10505338 (+)
G16267 NA other downstream 1699294 11894504 ~ 11900873 (+)
G16467 clns1a,LOC102781126 other downstream 2200785 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 2246920 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 2435464 12630674 ~ 12630864 (+)

Expression


Co-expression Network