LOC120574297


Basic Information

Item Value
gene id LOC120574297
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 10184003 ~ 10201584 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21768
TTTAATACTGATATGGACCTGTGTTTCtgaaataaagttgaattgatatacagtatcaaaaagtaagtgtacagcttgtataacagtgtacatttgctgtcccctcaaaataaataaaatggttttatttcagttagtcTAATAGCTggttttgatttgcattgagagatgatcttatgaaaagtaccccatgccaatatctaggtatggtgaagggtatgtgatgatgtgtggctattttaattccaaaggccaagggtgcatagtatcctggatatcaggatgcatagtatcctggatatcaggatgcatagtatcctggatccatgaaataactggcctttaaaaataaaaatctgcctgcctctatgggaatttaacataggggtgtactgactttttttgccagcggtttagacattaatggctgtgtgttgagttattgaggggacagcacatttacacggttatacaagctgtacacttaatactttacattgtagcaaagtgtaatttcttcagtgttgtcccattaaaagacataatgaaatatttactaaaatgcgaggggtgtactcacttttgtgagatactgtagatTATGTTGTgagaaaaatgtgacattttgttgTATTAATAATCTGCTGAGTGAACT
>XM_039824600.1
CCATTCTGGTAAGGCTACTTGGAACAATCAGTCCAGAGTAGTTTGATTCTCCCTGAAACAAGTTGAAACATGTTGGCAAACTGAGAACCCACACAAAACCTGATGAGGAACTAAGAGAGGAAACTGCACATCCAAAGGGGGGCTGAAAGACACATATAAGATCAAGAGACAGTACGTGAAGACGATAGAGTGGCAGGCGACACACCAACTGGACATGGCTCGTGTACTGGTGCTGTTCATGTTGCTCTGGAGCTCAGgattccCAGGTTTCCAGACAAAGAAAAAAGATATTGATGATATCCGGTTGTTGGGAGGATCCAGCCGCTGTTCTGGTGTGCTACAGGTGAAGCGCCAGGGAGTGTGGAAAGAAGTGGATGATAATTACTGGGACCTGAAGTTAGCAGACGTAGTTTGCAGACATCTGGACTGTGGTTCTGTGATTCAAGCTTTATCAAAAATACATTCATACTCAGACCCTTATAGCAGCATCACACCTTCCTGTCTTGAGTCTAGATCTAGACTGAAGAaatgtttaacaaaaaggtccatGCTTCAGGCTACCAGTTTGGAGATCATCTGCTCAGACTCTGTCAGGCTGGTGAATGGGACTAGTCTGTGTTCAGGCAGACTGGAGGTGAAGTCTAACCAGTCTACCCAGTCgtggtcctcagtgtgtgaagatGACTTTGACCTACAGGATGCAGAGGTGGTCTGCAGGGAGCTTCACTGTGGGTCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGACATGGAGGATCCAGTGTGGACCAAAGAGTTCCAGTGTAGAGGCCATGAGTCTGCTCTGCTGGACTGTGACAGCTCAGATAGAAACACCTGCTCTTCTGGCAAAGCTGTTGGACTCACCTGTTCAGAGCCCGATCATTTCCAGTTGGTGAGAGGATCCAGTCGCTGTGCTGGTGAACTGGAGATGAAGATAGAGGGAGAGTGGCTTGTTGTGGATGTTGATGATCATTCTGCCTGGAATCTAAAGGCAGCAGATGTAGTGTGTAGACATCTTGACTGTGGTTCTGCTGTTTCAACAGGGTGGAAAAAGATGAATTACTACGCAGTAATATGGATGATTAGATCAACTTGCCTTCAATCCAAGTCTGCAGTTAGGGAGTGTATATTAACAAAGTATTCCCTTTCCCTTTCCAACCTGGAGATCATCTGCTCAGaCTCTATCAGGCTGGTGAATGGGACTAGTCTGTGTTCAGGCAGACTGGAGGTGAAGTCTACCCAGTCTACCCAGTTgtggtcctcagtgtgtgaagatGACTTTGACCTGCAGGATGCAAAGGTGGTCTGCTCCGAACTTGGCTGTGGGGCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGACATGGAGGCTCCAGTGGGGACCAAAGAGTTCCAGTGTAGAGGCCATGAGTCTTATCTGCTGGACTGTGACAGCTCAGATAGAAACACCTGCTCTTCTGGCAAAGCTGCTGgactcacctgctcagAACCTGGTGTTGTCAGGCTGGTTGGAGGAGCCAGCCGGTGTGATGGCACACTGGAGATGAAACACCAGAACACATGGAAACCAGTGGATGACAGGAGCCAGAACCTGAGATTAGCAGGCATGGTGTGTGGAGAGCTGGGCTGTGGCTTTGCTTTTTCAACCAGAAGGCAAAAGCAGATAAGAAGAGAATCTTGGGGAATCACATTGGACTGTAATACATCTTCACTCTTGAAATGTTTTACAGAATTTACATATTCCACTACCACCATAGAGATAACCTGCTCAGACTCTCAGACTGTCAGGCTGGTGAATGGGACTAGTCTGTGTTCAGGCAGACTGGAGATAAAGTCTACCCAGTCgtggtcctcagtgtgtgaagatGACTTTGACCTGCAGGATGCAGAGGTGGTCTGCAGGGAGCTTGAATGTGGGGCTCCTTCAGTCCTCCAGGGGGCACTCTATGGAGACATGGaggctccagtgtggaccaaaCAGTTCCAGTGTAGAGGCCATGAGTCTTCTCTGCTGGACTGTGACAGCTCAGCTAGCAACACCTGCCCTTCTGGCAAAGCTGCCGgactcacctgctcagGTCCAGATTATATCAGGTTGGTGGGAGAGCCCAGCCGCTGTGCTGGTAAACCAGAGATGAAAAACTACGGAGAGTGGAGACGAGTGGTTGCCTTGGATTTCAAATGGAACCGGATGTCTGCAGATGCAGTTTGTCGAAAACTGGACTGTGGTTCTGCTGTTCCAATGAGTTTTTATTACATTGGAGGATATAGTGGATCTTCAGCCTATCCTGTGTGGTTGATCAACTCGTCCTGTGTTCAGTCTAAATCTGCAGTGAAGGAATGTGTGACAACTGACAATACGTACAGCTCTATTATCCTGGAAATTACCTGCTCAGATTTGCTGGCTCAGCCAAAgatctccccctctccctcccctgaCGCGGTCTACAAGGCCAAGCAGCAGAGGCTCCAGGTGCTCATGGGCTCCAACTTCACCATCAGGTGCTCCGTCAGACCACAGTACCCAGGAGGCTCCTTCAAGCTCATcgtccccacccctgacccagcACAGAACTACACCCTGCCAGCTGTCAATCACTCGGCCCACTTCCAGTTCTCTGCTGCAGACTCCACCCACCGAGGGGAGTACCGCTGTGTTTATCACCTCTACGTTTTCTCCGATAACTTCTCTTCTGAGAGCCGGCCGCTCCATCTCACTCTCGCAGATTTGCTGGCTCAGCCAAACATCTCCTTCTCTACCCACATTGACGGGGTTTCTGAGGCCACGCAGCAGGGGTTGCGAGTGCTCATGGACTCTGACTTCACCATCAGCTGCTCCGTCCTGCCACAGTACCCAGGAGGCTCCTTCCAGCTCATCTTCAACACCTCCGACCCAGAACAGAAGACCTACACCCTGCCAGCTGTCAATCACTCGGCCCACTTCCTGTTCTCTGCTGCAGACTCCACCCACCGAGGGGAGTACCGCTGTGTTTATCACCTCAACGTTTTCTCCCATGACTTCTCTTCTGAGAGCGGGCCGCTCCATCTCACTCTTGCAGGTAACTTCACAGACAATCTGAGTCAAACAGGGAAACGTCAAACTGACTTACATCTGGTCATCGGACTGGTTGTCCTGGTGGTGCTGCTGGTGCTCGTGTCCGGTGCTGCCCTGTTTTGCTACTccaagGCCAGCAGAGGGCAGACGCCAAGACGAGAGGACAACATGGAGGTGCGTTACCTCTGTGGTGCTGATGACTTGCTGGGTGAAGAGGCAGGAGGAGCGCAGGGCTCAGAGTAGGATCTCACAGCCAGACGGACGGCTCTGCTCTCAAACAGCCAAATCAGAGCAGTTCAGGTGTGGGATAATATCAGGCATAGCTTTCCTAGAGAAGacccagacacacaaacaactacattggcaaacttttaaagcaacaccaaagattcttttgtacctttaaataatgtttccaaaatcgtttcagtggttcatcaactcgtaacagggtgaacggcacttctgtaTCTGCTTTGTTGCCCTCTAtcgcagtgtttctcaaatgggggtacgtgtaaaATCACCAGCGCTAATACGTCTTTGACTTACAGCTGTCAAcccaccccccctctctctctctgatataGAGGCATCAGAATTACATTTAAACAATTTTATAAGCGGTTGAAAGTTCCTTGTAGTCACCCTAAAAGTCAGACACTTCCATGTTTTGGTACAGGTGTTTTCACACCTGATGTGTACCATACGGGAGTAACGTTACACGTGAACTGTAGGTCTCAAAACCACCTTTTCAGGTGGACTCGGCCACGGTTTGGACCAACTGGGCCTGGGTTCGGTCGCAACGTTTAAACTAATCAAAACAATTTGGACTTTGGGATCAAGTGAAAGTAAAGGAAGATGGTTTCACCATGTATTAGGGCattcaaaaaaatgtatcagaatgcaggaaacaGAGTGGTTCAGAATTTCCTGGGAGAGGATCCACAGATTCGCCCTGCTCAAATATATTAATCAACTTGTAAATCTTAAATTCTTATTAAACTCCTGCACtgatgtttcacaataaaagcctcccAGTGGCTCATAAGACACAATCCCTTCCTTTCCTGGTAGGGTTTCAGGTGGAAAGAGATTGTTAAAGTTGCCTTTGTAATTCATTTATATAACTTGTCTGGTCTGTGTTGTATGTTCACATAGTTTAATACTGATATGGACCTGTGTTTCtgaaataaagttgaattgatatacagtatcaaaaagtaagtgtacagcttgtataacagtgtacatttgctgtcccctcaaaataaataaaatggttt
>XM_039824601.1
CCATTCTGGTAAGGCTACTTGGAACAATCAGTCCAGAGTAGTTTGATTCTCCCTGAAACAAGTTGAAACATGTTGGCAAACTGAGAACCCACACAAAACCTGATGAGGAACTAAGAGAGGAAACTGCACATCCAAAGGGGGGCTGAAAGACACATATAAGATCAAGAGACAGTACGTGAAGACGATAGAGTGGCAGGCGACACACCAACTGGACATGGCTCGTGTACTGGTGCTGTTCATGTTGCTCTGGAGCTCAGgattccCAGGTTTCCAGACAAAGAAAAAAGATATTGATGATATCCGGTTGTTGGGAGGATCCAGCCGCTGTTCTGGTGTGCTACAGGTGAAGCGCCAGGGAGTGTGGAAAGAAGTGGATGATAATTACTGGGACCTGAAGTTAGCAGACGTAGTTTGCAGACATCTGGACTGTGGTTCTGTGATTCAAGCTTTATCAAAAATACATTCATACTCAGACCCTTATAGCAGCATCACACCTTCCTGTCTTGAGTCTAGATCTAGACTGAAGAaatgtttaacaaaaaggtccatGCTTCAGGCTACCAGTTTGGAGATCATCTGCTCAGACTCTGTCAGGCTGGTGAATGGGACTAGTCTGTGTTCAGGCAGACTGGAGGTGAAGTCTAACCAGTCTACCCAGTCgtggtcctcagtgtgtgaagatGACTTTGACCTACAGGATGCAGAGGTGGTCTGCAGGGAGCTTCACTGTGGGTCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGACATGGAGGATCCAGTGTGGACCAAAGAGTTCCAGTGTAGAGGCCATGAGTCTGCTCTGCTGGACTGTGACAGCTCAGATAGAAACACCTGCTCTTCTGGCAAAGCTGTTGGACTCACCTGTTCAGAGCCCGATCATTTCCAGTTGGTGAGAGGATCCAGTCGCTGTGCTGGTGAACTGGAGATGAAGATAGAGGGAGAGTGGCTTGTTGTGGATGTTGATGATCATTCTGCCTGGAATCTAAAGGCAGCAGATGTAGTGTGTAGACATCTTGACTGTGGTTCTGCTGTTTCAACAGGGTGGAAAAAGATGAATTACTACGCAGTAATATGGATGATTAGATCAACTTGCCTTCAATCCAAGTCTGCAGTTAGGGAGTGTATATTAACAAAGTATTCCCTTTCCCTTTCCAACCTGGAGATCATCTGCTCAGaCTCTATCAGGCTGGTGAATGGGACTAGTCTGTGTTCAGGCAGACTGGAGGTGAAGTCTACCCAGTCTACCCAGTTgtggtcctcagtgtgtgaagatGACTTTGACCTGCAGGATGCAAAGGTGGTCTGCTCCGAACTTGGCTGTGGGGCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGACATGGAGGCTCCAGTGGGGACCAAAGAGTTCCAGTGTAGAGGCCATGAGTCTTATCTGCTGGACTGTGACAGCTCAGATAGAAACACCTGCTCTTCTGGCAAAGCTGCTGgactcacctgctcagAACCTGGTGTTGTCAGGCTGGTTGGAGGAGCCAGCCGGTGTGATGGCACACTGGAGATGAAACACCAGAACACATGGAAACCAGTGGATGACAGGAGCCAGAACCTGAGATTAGCAGGCATGGTGTGTGGAGAGCTGGGCTGTGGCTTTGCTTTTTCAACCAGAAGGCAAAAGCAGATAAGAAGAGAATCTTGGGGAATCACATTGGACTGTAATACATCTTCACTCTTGAAATGTTTTACAGAATTTACATATTCCACTACCACCATAGAGATAACCTGCTCAGACTCTCAGACTGTCAGGCTGGTGAATGGGACTAGTCTGTGTTCAGGCAGACTGGAGATAAAGTCTACCCAGTCgtggtcctcagtgtgtgaagatGACTTTGACCTGCAGGATGCAGAGGTGGTCTGCAGGGAGCTTGAATGTGGGGCTCCTTCAGTCCTCCAGGGGGCACTCTATGGAGACATGGaggctccagtgtggaccaaaCAGTTCCAGTGTAGAGGCCATGAGTCTTCTCTGCTGGACTGTGACAGCTCAGCTAGCAACACCTGCCCTTCTGGCAAAGCTGCCGgactcacctgctcagGTCCAGATTATATCAGGTTGGTGGGAGAGCCCAGCCGCTGTGCTGGTAAACCAGAGATGAAAAACTACGGAGAGTGGAGACGAGTGGTTGCCTTGGATTTCAAATGGAACCGGATGTCTGCAGATGCAGTTTGTCGAAAACTGGACTGTGGTTCTGCTGTTCCAATGAGTTTTTATTACATTGGAGGATATAGTGGATCTTCAGCCTATCCTGTGTGGTTGATCAACTCGTCCTGTGTTCAGTCTAAATCTGCAGTGAAGGAATGTGTGACAACTGACAATACGTACAGCTCTATTATCCTGGAAATTACCTGCTCAGATTTGCTGGCTCAGCCAAAgatctccccctctccctcccctgaCGCGGTCTACAAGGCCAAGCAGCAGAGGCTCCAGGTGCTCATGGGCTCCAACTTCACCATCAGGTGCTCCGTCAGACCACAGTACCCAGGAGGCTCCTTCAAGCTCATcgtccccacccctgacccagcACAGAACTACACCCTGCCAGCTGTCAATCACTCGGCCCACTTCCAGTTCTCTGCTGCAGACTCCACCCACCGAGGGGAGTACCGCTGTGTTTATCACCTCTACGTTTTCTCCGATAACTTCTCTTCTGAGAGCCGGCCGCTCCATCTCACTCTCGCAGATTTGCTGGCTCAGCCAAACATCTCCTTCTCTACCCACATTGACGGGGTTTCTGAGGCCACGCAGCAGGGGTTGCGAGTGCTCATGGACTCTGACTTCACCATCAGCTGCTCCGTCCTGCCACAGTACCCAGGAGGCTCCTTCCAGCTCATCTTCAACACCTCCGACCCAGAACAGAAGACCTACACCCTGCCAGCTGTCAATCACTCGGCCCACTTCCTGTTCTCTGCTGCAGACTCCACCCACCGAGGGGAGTACCGCTGTGTTTATCACCTCAACGTTTTCTCCCATGACTTCTCTTCTGAGAGCGGGCCGCTCCATCTCACTCTTGCAGGCCAGCAGAGGGCAGACGCCAAGACGAGAGGACAACATGGAGGTGCGTTACCTCTGTGGTGCTGATGACTTGCTGGGTGAAGAGGCAGGAGGAGCGCAGGGCTCAGAGTAGGATCTCACAGCCAGACGGACGGCTCTGCTCTCAAACAGCCAAATCAGAGCAGTTCAGGTGTGGGATAATATCAGGCATAGCTTTCCTAGAGAAGacccagacacacaaacaactacattggcaaacttttaaagcaacaccaaagattcttttgtacctttaaataatgtttccaaaatcgtttcagtggttcatcaactcgtaacagggtgaacggcacttctgtaTCTGCTTTGTTGCCCTCTAtcgcagtgtttctcaaatgggggtacgtgtaaaATCACCAGCGCTAATACGTCTTTGACTTACAGCTGTCAAcccaccccccctctctctctctgatataGAGGCATCAGAATTACATTTAAACAATTTTATAAGCGGTTGAAAGTTCCTTGTAGTCACCCTAAAAGTCAGACACTTCCATGTTTTGGTACAGGTGTTTTCACACCTGATGTGTACCATACGGGAGTAACGTTACACGTGAACTGTAGGTCTCAAAACCACCTTTTCAGGTGGACTCGGCCACGGTTTGGACCAACTGGGCCTGGGTTCGGTCGCAACGTTTAAACTAATCAAAACAATTTGGACTTTGGGATCAAGTGAAAGTAAAGGAAGATGGTTTCACCATGTATTAGGGCattcaaaaaaatgtatcagaatgcaggaaacaGAGTGGTTCAGAATTTCCTGGGAGAGGATCCACAGATTCGCCCTGCTCAAATATATTAATCAACTTGTAAATCTTAAATTCTTATTAAACTCCTGCACtgatgtttcacaataaaagcctcccAGTGGCTCATAAGACACAATCCCTTCCTTTCCTGGTAGGGTTTCAGGTGGAAAGAGATTGTTAAAGTTGCCTTTGTAATTCATTTATATAACTTGTCTGGTCTGTGTTGTATGTTCACATAGTTTAATACTGATATGGACCTGTGTTTCtgaaataaagttgaattgatatacagtatcaaaaagtaagtgtacagcttgtataacagtgtacatttgctgtcccctcaaaataaataaaatggttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21768 False 655 lncRNA 0.35 1 10184003 10184657
XM_039824600.1 True 4362 mRNA 0.49 12 10184533 10201584
XM_039824601.1 False 4234 mRNA 0.48 12 10184533 10201584

Neighbor

gene id symbol gene type direction distance location
zgc:162698 tmem87a,LOC101066087 coding downstream 5205 10153891 ~ 10178798 (-)
dharma NA coding downstream 332335 9847998 ~ 9851668 (-)
LOC120554346 NA coding downstream 551975 9631923 ~ 9632028 (-)
LOC120543835 NA coding downstream 640862 9531021 ~ 9543141 (-)
LOC120551135 LOC101071594,LOC102800178,LOC103356830 coding downstream 652908 9524207 ~ 9531095 (-)
LOC120551203 NA coding upstream 25644 10227228 ~ 10248071 (-)
LOC120551206 NA coding upstream 56027 10257611 ~ 10342658 (-)
LOC120574326 NA coding upstream 140798 10342382 ~ 10352839 (-)
si:cabz01090165.1 LOC100707198,LOC102192222 coding upstream 291531 10493115 ~ 10567391 (-)
LOC120547527 LOC103361823,LOC107379843,LOC108244675 coding upstream 1294588 11496172 ~ 11501340 (-)
G16029 NA non-coding downstream 50863 10132868 ~ 10133140 (-)
G16028 NA non-coding downstream 53064 10130348 ~ 10130939 (-)
G16027 NA non-coding downstream 54240 10129086 ~ 10129763 (-)
G16026 NA non-coding downstream 56595 10126908 ~ 10127408 (-)
G16023 NA non-coding downstream 61190 10122607 ~ 10122813 (-)
G16081 NA non-coding upstream 34914 10236498 ~ 10237527 (-)
G16136 NA non-coding upstream 151611 10353195 ~ 10376811 (-)
G16137 NA non-coding upstream 161548 10363132 ~ 10373280 (-)
LOC120547199 NA non-coding upstream 242142 10443726 ~ 10451113 (-)
G16162 NA non-coding upstream 268231 10469815 ~ 10505332 (-)
G16064 NA other downstream 34432 10140176 ~ 10149571 (-)
G16066 NA other downstream 45656 10136688 ~ 10138347 (-)
LOC120551163 NA other downstream 473871 9676835 ~ 9710132 (-)
LOC120551129 NA other downstream 661772 9513476 ~ 9522231 (-)
eif2a eif2a other downstream 750348 9348209 ~ 9433655 (-)
LOC120574316 NA other upstream 117250 10318834 ~ 10330847 (-)
G16143 LOC103372137,LOC102304476 other upstream 171984 10373568 ~ 10424770 (-)
G16407 cul5,LOC101165410,LOC108248946 other upstream 1747753 11949337 ~ 11955578 (-)
G16422 NA other upstream 1787434 11989018 ~ 12033762 (-)
G16458 NA other upstream 2023475 12225059 ~ 12262775 (-)

Expression


Co-expression Network