G16115


Basic Information

Item Value
gene id G16115
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 10501531 ~ 10553760 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21826
aaatgtcccgttcttctttacctaaacccaaccgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcctgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaaatgtcccgttcttctttacctaaacctaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttctttacctaaacccaaccgtccc
>TU21829
aaatgtcccgttcttctttacctaaacccaaccgtcccgttcttctttacctaaacccaaccgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaaatgtcccgttcttctttacctaaacccaaatgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttctttacctaaacccaactgtccc
>TU21835
aaatgtcccgttcttctttacctaaacccaaccgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcctgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttctttacctaaacccaactgt
>TU21836
aaatgtcccgttcttctttacctaaacccaaccgtcccgttcttctttacctaaacccaaccgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaaatgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaaatgtcccgttcttctttacctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttcttttcctaaactcaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaaatgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttctttacctaaacccaaccgtccc
>TU21838
aaatgtcccgttcttctttacctaaacccaaccgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcctgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaaatgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaaccgtcccgttcttcttttcttaaacctaaccgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttcttttcctaaacctaac
>TU21839
aaatgtcccgttcttctttacctaaacccaaccgtcccgttcttctttacctaaacccaaccgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaaatgtcccgttcttctttacctaaacccaaatgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttctttatctaaacccaactgtcccgttcttcttttcctaaaccaaactgtcctgttcttctttacctaaacccaactgtcctgttcttcttttcctaaacccaactgtcccgttcttctttacctaaacccaactgtccc
>TU21843
aaatgtcccgttcttctttacctaaacccaaccgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcctgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaaccgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaaatgtcccgttcttctttacctaaacccaaatgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttctttacctaaacccaaccgtccc
>TU21844
aaatgtcccgttcttctttacctaaacccaaccgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcctgttcttctttacctaaacccaactgtcccgttcttctttatctaaacccaactgtcccgttcttcttttcctaaaccaaactgtcctgttcttctttacctaaacccaactgtcctgttcttcttttcctaaacccaactgtcccgttcttctttacctaaacccaactgtcctgttcttcttttcctaaacccaaccgtccc
>TU21845
aaatgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaaatgtcccgttcttctttacctaaacctaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttctttacctaaacccaaccgtccc
>TU21847
gttcttcttttgctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttcttttcctaaacccaaccgtcccgttcttcttttcttaaacctaaccgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttcttttcctaaacctaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21826 False 328 lncRNA 0.37 2 10501531 10553760
TU21829 False 299 lncRNA 0.59 4 10501531 10553417
TU21835 False 209 lncRNA 0.39 2 10501531 10502378
TU21836 True 647 lncRNA 0.43 4 10501531 10553760
TU21838 False 380 lncRNA 0.36 3 10501531 10553243
TU21839 False 415 lncRNA 0.59 5 10501531 10553417
TU21843 False 444 lncRNA 0.45 4 10501531 10553760
TU21844 False 299 lncRNA 0.43 2 10501531 10502642
TU21845 False 241 lncRNA 0.42 3 10501531 10553760
TU21847 False 284 lncRNA 0.44 2 10552653 10553243

Neighbor

gene id symbol gene type direction distance location
LOC120551211 NA coding upstream 37178 10455757 ~ 10464353 (+)
LOC120547173 NA coding upstream 56042 10434485 ~ 10445489 (+)
LOC120548947 LOC103372137,LOC102304476 coding upstream 76761 10405189 ~ 10424770 (+)
LOC120550666 LOC105915347 coding upstream 124720 10359389 ~ 10376811 (+)
si:ch211-137a8.4 LOC103372141,LOC107102523,LOC105915351,LOC101172006,LOC106961384,LOC103378353 coding upstream 381692 10055994 ~ 10119839 (+)
LOC120551226 NA coding downstream 423445 10977205 ~ 10979429 (+)
LOC120553334 NA coding downstream 982025 11535785 ~ 11540819 (+)
rps3 rps3,LOC102795110 coding downstream 1000892 11554652 ~ 11562928 (+)
LOC120554434 NA coding downstream 1002547 11556307 ~ 11556455 (+)
LOC120554442 NA coding downstream 1003692 11557452 ~ 11557600 (+)
G16103 NA non-coding upstream 107561 10393420 ~ 10393970 (+)
G16101 NA non-coding upstream 113543 10387672 ~ 10387988 (+)
G16048 NA non-coding upstream 306321 10188963 ~ 10195210 (+)
G16044 NA non-coding upstream 315846 10183693 ~ 10185685 (+)
G16033 NA non-coding upstream 335062 10139003 ~ 10166469 (+)
G16125 NA non-coding downstream 106093 10659853 ~ 10660419 (+)
G16171 NA non-coding downstream 462615 11016375 ~ 11016658 (+)
G16176 NA non-coding downstream 638390 11192150 ~ 11192454 (+)
G16178 NA non-coding downstream 705207 11258967 ~ 11259682 (+)
G16180 NA non-coding downstream 741087 11294847 ~ 11295519 (+)
G15712 NA other upstream 497936 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 498159 9866710 ~ 10003372 (+)
G15640 NA other upstream 832002 9598313 ~ 9669529 (+)
G16267 NA other downstream 1340744 11894504 ~ 11900873 (+)
G16467 clns1a,LOC102781126 other downstream 1842235 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 1888370 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 2076914 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 2315070 12868830 ~ 12922469 (+)

Expression


Co-expression Network