G16164


Basic Information

Item Value
gene id G16164
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 10501535 ~ 10553975 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21912
tgaacacggccccttaagttaaggaaaaggtcgtgggtgggcttacgtttccatgacacgcgagacaagaacgggacggttgggtttaggaaaagaagaacaggacagttgggtttaggaaaagaagaacgggacagttgggtttaggaaaagaagaacgggacagttgggtttaggtaaagaagaacgggacatttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaatgggacagttgggtttaggtaaagaagaacgggacatttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacggttgggtttaggtaaagaagaacgggacggttgggtttaggtaaagaagaacgggac
>TU21914
tgaacacggccccttaagttaaggaaaaggtcgtgggtgggcttacgtttccatgacacgcgagacaagaacgggacggttgggtttaggaaaagaagaacaggacagttgggtttaggtaaagaagaacgggacagttgggtttaggaaaagaagaacaggacagttgggtttaggtaaagaagaacgggacagttgggtttaggaaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacatttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacaggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacggttgggtttaggtaaagaagaacgggac
>TU21916
tgaacacggccccttaagttaaggaaaaggtcgtgggtgggcttacgtttccatgacacgcgagacaagaacgggacggttgggtttaggaaaagaagaacaggacagttgggtttaggaaaagaagaacgggacagttgggtttaggaaaagaagaacgggacagttgggtttaggaaaagaagaacgggacagttgggtttaggtaaagaagaacaggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacggttgggtttaggtaaagaagaacgggac
>TU21925
gactaacacaaaaaatctctgtcattcaacctgatctcacagaattccgtgaaatgaacacggctccataactcaaaatctgtggcaatTTCACGGAATCGCATAAAGTTCTGTGATGAGTCCGCGGAAGAATTCCGTCAAATGTACATGGCACCCTTAGGTTTAGGAataggtcgtgggtgggcttacgttccCATGACACCTGGGACAAgaatgggacggttgggtttaggtaaagaagaacgggacagttgggtttaggaaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacatttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacatttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacatttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacaggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacggttgggtttaggtaaagaagaacgggac
>TU21926
gactaacacaaaaaatctctgtcattcaacctgatctcacagaattccgtgaaatgaacacggctccataactcaaaatctgtggcaatTTCACGGAATCGCATAAAGTTCTGTGATGAGTCCGCGGAAGAATTCCGTCAAATGTACATGGCACCCTTAGGTTTAGGAataggtcgtgggtgggcttacgttccCATGACACCTGGGACAAgaatgggacggttgggtttaggtaaagaagaacgggacagttgggtttaggaaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacatttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacatttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacaggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacggttgggtttaggtaaagaagaacgggac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21912 False 512 lncRNA 0.40 3 10501535 10502714
TU21914 False 425 lncRNA 0.49 3 10501535 10502714
TU21916 False 309 lncRNA 0.56 3 10501535 10502714
TU21925 True 800 lncRNA 0.49 5 10501535 10553975
TU21926 False 597 lncRNA 0.47 3 10501535 10553975

Neighbor

gene id symbol gene type direction distance location
LOC120574326 NA coding downstream 148696 10342382 ~ 10352839 (-)
LOC120551206 NA coding downstream 158877 10257611 ~ 10342658 (-)
LOC120551203 NA coding downstream 253464 10227228 ~ 10248071 (-)
zgc:162698 tmem87a,LOC101066087 coding downstream 322737 10153891 ~ 10178798 (-)
dharma NA coding downstream 649867 9847998 ~ 9851668 (-)
LOC120547527 LOC103361823,LOC107379843,LOC108244675 coding upstream 942197 11496172 ~ 11501340 (-)
gdpd4a LOC102208771,LOC101483676,LOC102301321,LOC100692992,LOC103373497 coding upstream 1066696 11620671 ~ 11642942 (-)
pak1 pak1,LOC100698864,LOC101483196 coding upstream 1145924 11699899 ~ 11793201 (-)
capn5a capn5,LOC100709916,LOC102310670,LOC106535735 coding upstream 1259304 11813279 ~ 11865934 (-)
dcun1d5 LOC106964839,LOC103138233,LOC106911103,LOC103475081,LOC108248937,LOC103377933 coding upstream 1333514 11887489 ~ 11906289 (-)
LOC120547199 NA non-coding downstream 50422 10443726 ~ 10451113 (-)
G16136 NA non-coding downstream 124724 10353195 ~ 10376811 (-)
G16137 NA non-coding downstream 128255 10363132 ~ 10373280 (-)
G16081 NA non-coding downstream 264008 10236498 ~ 10237527 (-)
G16029 NA non-coding downstream 368395 10132868 ~ 10133140 (-)
LOC120543595 LOC108245180 non-coding upstream 471012 11024987 ~ 11025980 (-)
LOC120549056 NA non-coding upstream 538937 11092912 ~ 11102774 (-)
G16174 NA non-coding upstream 579129 11133104 ~ 11133336 (-)
G16175 NA non-coding upstream 617661 11171636 ~ 11171843 (-)
G16179 NA non-coding upstream 709353 11263328 ~ 11263778 (-)
G16143 LOC103372137,LOC102304476 other downstream 76765 10373568 ~ 10424770 (-)
LOC120574316 NA other downstream 170688 10318834 ~ 10330847 (-)
LOC120574297 NA other downstream 299951 10184003 ~ 10201584 (-)
G16064 NA other downstream 351964 10140176 ~ 10149571 (-)
G16066 NA other downstream 363188 10136688 ~ 10138347 (-)
G16407 cul5,LOC101165410,LOC108248946 other upstream 1395362 11949337 ~ 11955578 (-)
G16422 NA other upstream 1435043 11989018 ~ 12033762 (-)
G16458 NA other upstream 1671084 12225059 ~ 12262775 (-)
LOC120554324 NA other upstream 1933042 12487017 ~ 12487180 (-)
LOC120554526 NA other upstream 1934898 12488873 ~ 12489063 (-)

Expression


Co-expression Network