G16171


Basic Information

Item Value
gene id G16171
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 11016375 ~ 11016658 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21936
gttggggagtaacggaatacatgtaacggcgttacgtattcagaatacaaattatgagtaactgtattccgttacagttacaatttaaatcgttggtatttagaatacagttacattgttgaaatcaatggattacatgacgatacttctctgtttcacgagtttattcactctgactaaattaaggcaactccatgcattttccagaagccccgatatgaaatcgaaaaaaatagctatttgcgtgatcagtcacaatggagtcggaaccggcacgacagagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21936 True 284 lncRNA 0.38 1 11016375 11016658

Neighbor

gene id symbol gene type direction distance location
LOC120551226 NA coding upstream 36946 10977205 ~ 10979429 (+)
LOC120551211 NA coding upstream 552022 10455757 ~ 10464353 (+)
LOC120547173 NA coding upstream 570886 10434485 ~ 10445489 (+)
LOC120548947 LOC103372137,LOC102304476 coding upstream 591605 10405189 ~ 10424770 (+)
LOC120550666 LOC105915347 coding upstream 639564 10359389 ~ 10376811 (+)
LOC120553334 NA coding downstream 519127 11535785 ~ 11540819 (+)
rps3 rps3,LOC102795110 coding downstream 537994 11554652 ~ 11562928 (+)
LOC120554434 NA coding downstream 539649 11556307 ~ 11556455 (+)
LOC120554442 NA coding downstream 540794 11557452 ~ 11557600 (+)
LOC120554427 NA coding downstream 543733 11560391 ~ 11560539 (+)
G16125 NA non-coding upstream 355956 10659853 ~ 10660419 (+)
G16115 NA non-coding upstream 462615 10501531 ~ 10553760 (+)
G16103 NA non-coding upstream 622405 10393420 ~ 10393970 (+)
G16101 NA non-coding upstream 628387 10387672 ~ 10387988 (+)
G16048 NA non-coding upstream 821165 10188963 ~ 10195210 (+)
G16176 NA non-coding downstream 175492 11192150 ~ 11192454 (+)
G16178 NA non-coding downstream 242309 11258967 ~ 11259682 (+)
G16180 NA non-coding downstream 278189 11294847 ~ 11295519 (+)
G16181 NA non-coding downstream 278916 11295574 ~ 11295932 (+)
G16183 NA non-coding downstream 280516 11297174 ~ 11297587 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 511037 10388232 ~ 10505338 (+)
G15712 NA other upstream 1012780 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 1013003 9866710 ~ 10003372 (+)
G15642 NA other upstream 1347896 9645137 ~ 9668479 (+)
LOC120551159 fam13c other upstream 1363544 9631391 ~ 9652831 (+)
G16267 NA other downstream 877846 11894504 ~ 11900873 (+)
G16467 clns1a,LOC102781126 other downstream 1379337 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 1425472 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 1614016 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 1852172 12868830 ~ 12922469 (+)

Expression


Co-expression Network