G16178


Basic Information

Item Value
gene id G16178
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 11258967 ~ 11259682 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21943
CAAATTATCTGTTAAaccacattcatttgattccataCAGTAATCCCGTAGCATTCTTGTGCACATATTTACAGCTAATACTGCGGTGATTTCTAGGCTATAGCTATATTTATCAATACATCATATTCTGTTTAAAATCATATTGTTTGTCACAAACATCATTtataataaacacacaacactTACGTCTATGTtaatttgctgtttatttagtttaaaaggTAACAGGATAACTTGTAGTCTTGGTGGCTTACCGGCGTCTGCTCTGTTGTTGTTAAAGGAAAGTTTGCCGCGATCGGCGAGTTTAAATGACGTTACTACATCCGGGGTAACAGGAAATGATTGTAATTTtgagtaattatttattttgtctgtcaGTCTTTGGTGGCTTAGTGGAATGTTTTGGTGAGTCAGTTATAAATCTTCGGTAAATTTCTAGTCTACTAGATCTGTTAATTTTGGCTGATTGTAGCTTTTATTGTCTGTTCGCCTTAGCCACCCCTGTATTTTATTTGGGGTTGGTATCTTCCAATTCCAGGGATGGCTACAGGCCTATATAGACTGTCAGTGTCAGTTGCTCGAGAGAGCTAGAGAAGTAAGGACGTCAGTCTGTGAAGGCTCTGGTGACTAGTACAAAAACGTCAAACTTGTATACAGCTGTaactttgtattgtttaataagTTTTGACTCTCacgtcaatttattttattttttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21943 True 716 lncRNA 0.39 1 11258967 11259682

Neighbor

gene id symbol gene type direction distance location
LOC120551226 NA coding upstream 279538 10977205 ~ 10979429 (+)
LOC120551211 NA coding upstream 794614 10455757 ~ 10464353 (+)
LOC120547173 NA coding upstream 813478 10434485 ~ 10445489 (+)
LOC120548947 LOC103372137,LOC102304476 coding upstream 834197 10405189 ~ 10424770 (+)
LOC120550666 LOC105915347 coding upstream 882156 10359389 ~ 10376811 (+)
LOC120553334 NA coding downstream 276103 11535785 ~ 11540819 (+)
rps3 rps3,LOC102795110 coding downstream 294970 11554652 ~ 11562928 (+)
LOC120554434 NA coding downstream 296625 11556307 ~ 11556455 (+)
LOC120554442 NA coding downstream 297770 11557452 ~ 11557600 (+)
LOC120554427 NA coding downstream 300709 11560391 ~ 11560539 (+)
G16176 NA non-coding upstream 66513 11192150 ~ 11192454 (+)
G16171 NA non-coding upstream 242309 11016375 ~ 11016658 (+)
G16125 NA non-coding upstream 598548 10659853 ~ 10660419 (+)
G16115 NA non-coding upstream 705207 10501531 ~ 10553760 (+)
G16103 NA non-coding upstream 864997 10393420 ~ 10393970 (+)
G16180 NA non-coding downstream 35165 11294847 ~ 11295519 (+)
G16181 NA non-coding downstream 35892 11295574 ~ 11295932 (+)
G16183 NA non-coding downstream 37492 11297174 ~ 11297587 (+)
G16185 NA non-coding downstream 45599 11305281 ~ 11305511 (+)
G16190 NA non-coding downstream 86333 11346015 ~ 11346356 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 753629 10388232 ~ 10505338 (+)
G15712 NA other upstream 1255372 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 1255595 9866710 ~ 10003372 (+)
G15642 NA other upstream 1590488 9645137 ~ 9668479 (+)
LOC120551159 fam13c other upstream 1606136 9631391 ~ 9652831 (+)
G16267 NA other downstream 634822 11894504 ~ 11900873 (+)
G16467 clns1a,LOC102781126 other downstream 1136313 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 1182448 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 1370992 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 1609148 12868830 ~ 12922469 (+)

Expression


Co-expression Network