G16180


Basic Information

Item Value
gene id G16180
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 11294847 ~ 11295519 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU21945
tattaaaccattaatgatggctgcattccacttaggagagaccctggtattaaaccattaatgatggctgcattccacttaggagaggtcctggtattaaaccattaatgatggctgcattccacttaggagaggtcctggtattaaaccattactgatggctgcattccacttaggagggaccctggtattaaaccattactgatggctgcattccacttaggagaggccctggtattaaaccattaatgatggctgcattccacttaggagagaccctggtattaaaccattaatgatggctgcattccacttaggagagaccctggtattaaaccattaatgatggctgcattccacttaggagaggccctggtattaaaccattaatgatggctgcattccacttaggagaggccctggtattaaaccattaatgatggctgcattccacttaggagagaccctggtattaaaccattactgatggctgcattccacttaggagaggtcctggtattaaaccattaatgatggctgcattccacttaggagaggccctggtattaaaccattactgatggctgcattccacttaggagaggtcctggtattaaaccattaatgatggctgcattccacttaggagagaccctggtattaaaccattaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21945 True 673 lncRNA 0.43 1 11294847 11295519

Neighbor

gene id symbol gene type direction distance location
LOC120551226 NA coding upstream 315418 10977205 ~ 10979429 (+)
LOC120551211 NA coding upstream 830494 10455757 ~ 10464353 (+)
LOC120547173 NA coding upstream 849358 10434485 ~ 10445489 (+)
LOC120548947 LOC103372137,LOC102304476 coding upstream 870077 10405189 ~ 10424770 (+)
LOC120550666 LOC105915347 coding upstream 918036 10359389 ~ 10376811 (+)
LOC120553334 NA coding downstream 240266 11535785 ~ 11540819 (+)
rps3 rps3,LOC102795110 coding downstream 259133 11554652 ~ 11562928 (+)
LOC120554434 NA coding downstream 260788 11556307 ~ 11556455 (+)
LOC120554442 NA coding downstream 261933 11557452 ~ 11557600 (+)
LOC120554427 NA coding downstream 264872 11560391 ~ 11560539 (+)
G16178 NA non-coding upstream 35165 11258967 ~ 11259682 (+)
G16176 NA non-coding upstream 102393 11192150 ~ 11192454 (+)
G16171 NA non-coding upstream 278189 11016375 ~ 11016658 (+)
G16125 NA non-coding upstream 634428 10659853 ~ 10660419 (+)
G16115 NA non-coding upstream 741087 10501531 ~ 10553760 (+)
G16181 NA non-coding downstream 55 11295574 ~ 11295932 (+)
G16183 NA non-coding downstream 1655 11297174 ~ 11297587 (+)
G16185 NA non-coding downstream 9762 11305281 ~ 11305511 (+)
G16190 NA non-coding downstream 50496 11346015 ~ 11346356 (+)
G16192 NA non-coding downstream 123095 11418614 ~ 11418881 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 789509 10388232 ~ 10505338 (+)
G15712 NA other upstream 1291252 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 1291475 9866710 ~ 10003372 (+)
G15642 NA other upstream 1626368 9645137 ~ 9668479 (+)
LOC120551159 fam13c other upstream 1642016 9631391 ~ 9652831 (+)
G16267 NA other downstream 598985 11894504 ~ 11900873 (+)
G16467 clns1a,LOC102781126 other downstream 1100476 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 1146611 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 1335155 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 1573311 12868830 ~ 12922469 (+)

Expression


Co-expression Network