G16229


Basic Information

Item Value
gene id G16229
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 11689220 ~ 11771683 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22073
gtacagttttattcaattttttcatttttcagagTTGTTTCAAATCATCAAAATGACTTATAAAGATAAACGTATAAAGACAGATAAATTATGGCTCTGATAACCACTCCATcagtcagtgtgtttgtgtcattgtGGGACTTTGGTGTTTTCAATCGGTTTAGTTTAGACTCAACAAAGTCACACAATCAGGGGGCGTAGCACACAATTcagggccctgtagaaaggcattcttcCCCCCTTTCTCcaccagtgttgggaaagttcactttctacgtgaactagttcaaagttcagtcattttaaaatcaactaattcagttcatagttcttttttttccccatatgttgcttcagttcaacgtgccgtgccaggtttgctgtggatgtgactgaagtgcggattttctttttgaaagtttGCCCAGAGATGTACGATTTTtcgcatcctcaccgacctttaACCTTaaaactcgtttaaatgatcatacgaagcctcctTGCTTGCTTTGTCgcctccacgctgctttttcttttgatgacgcatgcggcggtgagacactggtggctggtgttgccagattgggtgttttttccgctacgtATGAAGGCCTGCACTGTTAATTATTTGACTGTAAATTTACAATAAATTACAGGTTACCAGTTGCATGACTTTCACAGTAAGTTACTGTATcatttttacagtaaataattgTGAAATGACAGCTGTATACTGTGCTAATACTGTATACTAATTATGCCGTCGCATTACTGTGATTTAGCAGTAAGCTGCTGTAGAATTACTGTAAAACCGGTacacatttactgtaataaagcaGCATTTAGCTGTGAAATTACATTATCTTGCTGGATATAATCACAATAATATCCtgtatatttaaatttttactGTAAAATTAATGCAACTCAGTAGTTTACGGTGCGTTTTAGCCgtggttttggcctggaaggctctatagaaatctggtgccctattggacgaagttaaactgagggAGAgtggcgttcacagacaccagaatgaaagagttcacagtaacgttcatcaggcggtaatacggtacgttacagttcacgttcgcctaaattatgaacgcgttcaggcacaacactgtcccccacatccacagctattatatatatatatatatatatatatatatatatatacacatacatacatgcatacatacatacatacatacatacatacatatacatacatacatacatatatatatatatatagcatctTCTGGGTACTCCGTGCCCTCTAATCCGACACCCCTGCACACAATAACCGATAGACTAGCAACTACTGTGTTCTGTGAGGTAAAATGACTTGAGTCTGgaggctttgaagagagcatagaTGACGGCTTCAGATCCCTGATGTCTGACAGCCAGGTAAAGCTGTGAAAGTATCCAAAATACAGCATaaacttatatatatatatacagtacaggccaaaagtttggacacaccttctcattca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22073 True 1517 lncRNA 0.52 2 11689220 11771683

Neighbor

gene id symbol gene type direction distance location
LOC120550461 NA coding upstream 75998 11592428 ~ 11613222 (+)
LOC120550095 NA coding upstream 101959 11580446 ~ 11587261 (+)
kctd14 kctd14 coding upstream 115994 11565261 ~ 11573226 (+)
rps3 rps3,LOC102795110 coding upstream 126292 11554652 ~ 11562928 (+)
LOC120554420 NA coding upstream 126816 11562256 ~ 11562404 (+)
ompa omp,LOC102310369,LOC101166404,LOC105930201,LOC106535736 coding downstream 58129 11829812 ~ 11833364 (+)
LOC120551249 NA coding downstream 100245 11871928 ~ 11883024 (+)
LOC120550284 LOC106522765 coding downstream 186213 11957896 ~ 11973180 (+)
LOC120550300 LOC107727921,LOC103377937,LOC107661103,LOC100710678,LOC101484592 coding downstream 238993 12010676 ~ 12031804 (+)
LOC120550190 LOC103358193 coding downstream 273932 12045615 ~ 12056544 (+)
G16207 NA non-coding upstream 153919 11535088 ~ 11535301 (+)
LOC120572352 NA non-coding upstream 203150 11484612 ~ 11486070 (+)
LOC120552116 NA non-coding upstream 246961 11427476 ~ 11442259 (+)
G16192 NA non-coding upstream 270339 11418614 ~ 11418881 (+)
G16190 NA non-coding upstream 342864 11346015 ~ 11346356 (+)
G16250 NA non-coding downstream 47197 11818880 ~ 11819272 (+)
G16261 NA non-coding downstream 84668 11856351 ~ 11890247 (+)
G16270 NA non-coding downstream 128358 11900041 ~ 11912680 (+)
G16280 NA non-coding downstream 196511 11968194 ~ 11970005 (+)
G16283 NA non-coding downstream 209457 11981140 ~ 11982906 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 1183882 10388232 ~ 10505338 (+)
G15712 NA other upstream 1685625 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 1685848 9866710 ~ 10003372 (+)
G15642 NA other upstream 2020741 9645137 ~ 9668479 (+)
LOC120551159 fam13c other upstream 2036389 9631391 ~ 9652831 (+)
G16267 NA other downstream 122821 11894504 ~ 11900873 (+)
G16467 clns1a,LOC102781126 other downstream 624312 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 670447 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 858991 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 1097147 12868830 ~ 12922469 (+)

Expression


Co-expression Network