G16237


Basic Information

Item Value
gene id G16237
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 11754374 ~ 11812385 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22082
ttagctgtttaggtttaattactaatgttaactagcatgttagtgatcagtaattagcctgtgcccataaaattgaactgaaaccAAACCAACGTGATCAACAATACCCCAATCacgcaaagaagaagaagaagaagaagatgttgGCCAATCACAAGCCTgcaaaaaaaagcttttatgcATCAATCAATCCGTGGCACATTCAGGTTCCTCTGTCCCTCTAGTCTGCATCCACCACGGTCCACCTCTGGGATTGCTTCGTTGCTGTCGTAAAATGTCCTTCTTCTCAGCCGATGTgcgtcctcttcctctgtctctgtgttggcgttctaacgagcagggtaaatccagacagctagctagactatctgtctgtctgtctgtctaacagctagctagactgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctatctaacagctagctagactatctgtccaatcggagttttctctcgcacgactaaaactacttttgaacgtacacacgttccaccaaaacaagttccttccagaggctatttagcagaggcgccgcggcttttctccggtgcttagcgccgccctaagacgattctgattggtttaaagaaatgccgataaaccagagcacgttttcctcgcatcCAGGAATGTGCtgtgtggaccagccagaccctcctccgcagcgctgtggaggagggtctggcgaagCGACGCTACGGTCCCTCAGAACAAGTGACAAGAGATTTGCTCTCTACGCTCCGCGCAGCGCAGGTATTCATCAGCTGTTATCTCAGCGGTTTCACTTTTGGAAAGGTCAacaaggtcaaagttgaaataatttcgAAACTTTGAGCGCAAATCCGGACATAAAGCGGTTTCGCCGCCTATCACGTCTcaacgtggcatcatgactttccgtaaacatacacgccactttcctaaagccaggTGGCGAGTTATCTGCACGCTatttttgagctatccgcgtgtacgTCTACGCtggtatacagcggatgtaaacacaCACGCCGCGGCGCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22082 True 1058 lncRNA 0.48 3 11754374 11812385

Neighbor

gene id symbol gene type direction distance location
LOC120550461 NA coding upstream 141152 11592428 ~ 11613222 (+)
LOC120550095 NA coding upstream 167113 11580446 ~ 11587261 (+)
kctd14 kctd14 coding upstream 181148 11565261 ~ 11573226 (+)
LOC120554420 NA coding upstream 191970 11562256 ~ 11562404 (+)
LOC120554427 NA coding upstream 193835 11560391 ~ 11560539 (+)
ompa omp,LOC102310369,LOC101166404,LOC105930201,LOC106535736 coding downstream 17427 11829812 ~ 11833364 (+)
LOC120551249 NA coding downstream 59543 11871928 ~ 11883024 (+)
LOC120550284 LOC106522765 coding downstream 145511 11957896 ~ 11973180 (+)
LOC120550300 LOC107727921,LOC103377937,LOC107661103,LOC100710678,LOC101484592 coding downstream 198291 12010676 ~ 12031804 (+)
LOC120550190 LOC103358193 coding downstream 233230 12045615 ~ 12056544 (+)
G16235 NA non-coding upstream 1393 11734398 ~ 11752981 (+)
G16207 NA non-coding upstream 219073 11535088 ~ 11535301 (+)
LOC120572352 NA non-coding upstream 268304 11484612 ~ 11486070 (+)
LOC120552116 NA non-coding upstream 312115 11427476 ~ 11442259 (+)
G16192 NA non-coding upstream 335493 11418614 ~ 11418881 (+)
G16250 NA non-coding downstream 6495 11818880 ~ 11819272 (+)
G16261 NA non-coding downstream 43966 11856351 ~ 11890247 (+)
G16270 NA non-coding downstream 87656 11900041 ~ 11912680 (+)
G16280 NA non-coding downstream 155809 11968194 ~ 11970005 (+)
G16283 NA non-coding downstream 168755 11981140 ~ 11982906 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 1249036 10388232 ~ 10505338 (+)
G15712 NA other upstream 1750779 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 1751002 9866710 ~ 10003372 (+)
G15642 NA other upstream 2085895 9645137 ~ 9668479 (+)
LOC120551159 fam13c other upstream 2101543 9631391 ~ 9652831 (+)
G16267 NA other downstream 82119 11894504 ~ 11900873 (+)
G16467 clns1a,LOC102781126 other downstream 583610 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 629745 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 818289 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 1056445 12868830 ~ 12922469 (+)

Expression


Co-expression Network