G16280


Basic Information

Item Value
gene id G16280
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 11968194 ~ 11970005 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22175
gagagatgtgaggagaggagaggaagatcagaggagaggaagagcataggagaggaagagcataggagaggagcaggagaggaagaggagaggagaggaccaggagaggaagagcagaggagaggtacaggagatgaacaggaggagaggaacaggagaggaagagcaggggagaggaagagcaaagaaaaaggagagatctgggcgcggggggcccatctaagcttatctcgtcccgggcccaggcaagactgtcagctggcctgcacacacacacagacagatacacacacacacacacacacacacacacagacagacacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacacacacagagacagagacacacacacagagacacacacacacacacacacacacacagacagagacacacacacagagacacacacacacacacagagacacacacacacacacagagacacacacacacacacacacacacacacaaacagacacacacacacacagacagagaaacacacacacagagacacacacacac
>TU22176
cacacacacacacacacacacacacagatacacacacacacacacacacacagagacagagacaccacacagagacacacacacacacacacacacacacagacagagacacacacacagagacacacacacacacacagagacacacacacacacacagagacacacacacacacacacacacacacacaaacagacacacacacacacagacagagaaacacacacacagagacacacacacac
>TU22177
gagagatgtgaggagaggagaggaagatcagaggagaggaagagcataggagaggaagagcataggagaggagcaggagaggaagaggagaggagaggaccaggagaggaagagcagaggagaggtacaggagatgaacaggaggagaggaacaggagaggaagagcaggggagaggaagagcaaagaaaaaggagagatctgggcgcggggggcccatctaagcttatctcgtcccgggcccaggcaagactgtcagctggcctgcacacacacacagacagatacacacacacacacacacacacacacacagacagacacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacacacacagagacagagacacacacacagagacacacacacacacacagagacacacacacagagacacacacacacacacagagacacacacacacacacagagacacacacacacacacacacacacacacaaacagacacacacacacacagacagagaaacacacacacagagacacacacacac
>TU22178
gagagatgtgaggagaggagaggaagatcagaggagaggaagagcataggagaggaagagcataggagaggagcaggagaggaagaggagaggagaggaccaggagaggaagagcagaggagaggtacaggagatgaacaggaggagaggaacaggagaggaagagcaggggagaggaagagcaaagaaaaaggagagatctgggcgcggggggcccatctaagcttatctcgtcccgggcccaggcaagactgtcagctggcctgcacacacacacagacagatacacacacacacacacacacacacacacagacagacacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacacacacagagacagagacacacacacagagacacacacacacacacacacacagacagagacacacacacagagacacacacacacacacagagacacacacacacacacagagacacacacacacacacacacacacacacaaacagacacacacacacacagacagagaaacacacacacagagacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22175 True 601 lncRNA 0.44 2 11969375 11970005
TU22176 False 246 lncRNA 0.35 2 11968194 11970005
TU22177 False 587 lncRNA 0.60 2 11969375 11970005
TU22178 False 597 lncRNA 0.52 2 11969375 11970005

Neighbor

gene id symbol gene type direction distance location
LOC120551249 NA coding upstream 85170 11871928 ~ 11883024 (+)
ompa omp,LOC102310369,LOC101166404,LOC105930201,LOC106535736 coding upstream 134830 11829812 ~ 11833364 (+)
LOC120550461 NA coding upstream 354972 11592428 ~ 11613222 (+)
LOC120550095 NA coding upstream 380933 11580446 ~ 11587261 (+)
kctd14 kctd14 coding upstream 394968 11565261 ~ 11573226 (+)
LOC120550300 LOC107727921,LOC103377937,LOC107661103,LOC100710678,LOC101484592 coding downstream 40671 12010676 ~ 12031804 (+)
LOC120550190 LOC103358193 coding downstream 75610 12045615 ~ 12056544 (+)
aamdc aamdc,LOC102795396 coding downstream 103613 12073618 ~ 12077875 (+)
LOC120550138 NA coding downstream 174294 12144299 ~ 12173696 (+)
LOC120550122 NA coding downstream 248905 12218910 ~ 12235751 (+)
G16270 NA non-coding upstream 55514 11900041 ~ 11912680 (+)
G16261 NA non-coding upstream 77947 11856351 ~ 11890247 (+)
G16250 NA non-coding upstream 148922 11818880 ~ 11819272 (+)
G16237 NA non-coding upstream 155809 11754374 ~ 11812385 (+)
G16229 NA non-coding upstream 196511 11689220 ~ 11771683 (+)
G16283 NA non-coding downstream 11135 11981140 ~ 11982906 (+)
G16292 NA non-coding downstream 42493 12012498 ~ 12027627 (+)
G16293 NA non-coding downstream 52216 12022221 ~ 12029125 (+)
LOC120550573 NA non-coding downstream 129973 12099978 ~ 12100577 (+)
LOC120550493 NA non-coding downstream 162346 12132351 ~ 12137334 (+)
G16267 NA other upstream 67321 11894504 ~ 11900873 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 1462856 10388232 ~ 10505338 (+)
G15712 NA other upstream 1964599 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 1964822 9866710 ~ 10003372 (+)
G15642 NA other upstream 2299715 9645137 ~ 9668479 (+)
G16467 clns1a,LOC102781126 other downstream 425990 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 472125 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 660669 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 898825 12868830 ~ 12922469 (+)
hif1al NA other downstream 1137857 13107862 ~ 13137034 (+)

Expression


Co-expression Network