G16402


Basic Information

Item Value
gene id G16402
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 11844936 ~ 11853130 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22334
gtgtgttcaggtgcattctggggcgtgctggtcttacagggaggtgtgttcaggtgcattctggggcgtgctggtcttacagggaggtgtgttcaggtgcattctgggcgtgctggtcttacagggaggtgtgttcaggtgcattctgggcgcgctggtcttacagggaggtgtgttcaggtgcattctgggcgtgctggtcttacagggaggtgtgttcaggtgcattctgggcgtgctgg

Function

NR:

description
ubinuclein 2 isoform X1

GO:

id name namespace
GO:0030594 neurotransmitter receptor activity molecular_function

KEGG:

id description
ko04020 Calcium signaling pathway
ko04080 Neuroactive ligand-receptor interaction
ko04713 Circadian entrainment

RNA

RNA id representative length rna type GC content exon number start site end site
TU22334 True 242 lncRNA 0.58 2 11844936 11853130

Neighbor

gene id symbol gene type direction distance location
pak1 pak1,LOC100698864,LOC101483196 coding downstream 51735 11699899 ~ 11793201 (-)
gdpd4a LOC102208771,LOC101483676,LOC102301321,LOC100692992,LOC103373497 coding downstream 201994 11620671 ~ 11642942 (-)
LOC120547527 LOC103361823,LOC107379843,LOC108244675 coding downstream 343596 11496172 ~ 11501340 (-)
si:cabz01090165.1 LOC100707198,LOC102192222 coding downstream 1277545 10493115 ~ 10567391 (-)
LOC120574326 NA coding downstream 1492097 10342382 ~ 10352839 (-)
dcun1d5 LOC106964839,LOC103138233,LOC106911103,LOC103475081,LOC108248937,LOC103377933 coding upstream 34359 11887489 ~ 11906289 (-)
LOC120550316 NA coding upstream 133285 11986415 ~ 12006431 (-)
ints4 ints4 coding upstream 225076 12078206 ~ 12099187 (-)
LOC120550222 NA coding upstream 253139 12106269 ~ 12114449 (-)
LOC120550388 NA coding upstream 344973 12198103 ~ 12199664 (-)
G16383 NA non-coding downstream 32560 11809923 ~ 11812376 (-)
G16380 NA non-coding downstream 124694 11710848 ~ 11720242 (-)
G16377 NA non-coding downstream 148956 11694266 ~ 11695980 (-)
G16366 NA non-coding downstream 232921 11611538 ~ 11612015 (-)
G16356 NA non-coding downstream 250478 11593821 ~ 11594458 (-)
LOC120550567 NA non-coding upstream 186894 12040024 ~ 12067403 (-)
G16435 LOC104947591,LOC103474953,LOC103140701 non-coding upstream 261936 12115066 ~ 12265727 (-)
G16451 NA non-coding upstream 291920 12145050 ~ 12156278 (-)
LOC120550557 NA non-coding upstream 299244 12152374 ~ 12153862 (-)
G16454 NA non-coding upstream 302358 12155488 ~ 12219915 (-)
G16143 LOC103372137,LOC102304476 other downstream 1420166 10373568 ~ 10424770 (-)
LOC120574316 NA other downstream 1514089 10318834 ~ 10330847 (-)
LOC120574297 NA other downstream 1643352 10184003 ~ 10201584 (-)
G16064 NA other downstream 1695365 10140176 ~ 10149571 (-)
G16066 NA other downstream 1706589 10136688 ~ 10138347 (-)
G16407 cul5,LOC101165410,LOC108248946 other upstream 96207 11949337 ~ 11955578 (-)
G16422 NA other upstream 135888 11989018 ~ 12033762 (-)
G16458 NA other upstream 371929 12225059 ~ 12262775 (-)
LOC120554324 NA other upstream 633887 12487017 ~ 12487180 (-)
LOC120554526 NA other upstream 635743 12488873 ~ 12489063 (-)

Expression


Co-expression Network