G16437


Basic Information

Item Value
gene id G16437
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 12157297 ~ 12260324 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22396
CTTGCTTCATGAGACGGTCACCATAGCTACCGTACCTGCTTTGTCTCCTCGTAGCAAGGCATCGGGATTACAGAGACTCCCTCTGGATGTTCAGGGGTGATTGCACGGGGTATAACATAGGGATCAAAAGGTCGGCACACCTTCAAGTCAACACTGCCTGGCACAGGCTGTCCGTATGTATACCTGCACAGACTTCAGCTTTGACTTCTTCCTGATTAATGCTTACTTCATCAGGTGCATTCATTTGTAGGTCAAATTTAGGCAAAACTGGGGACAAAGGGATTATTAGCATTTTTTGCTTCATTAAACAGATTAAAAgtgatggtaaaaaaaatatataattaccGTATTTTTCCACCTTGAAGCTGTGTTGATTTTTTCAGACCCAATTGACACAGTAACTTGGTAAGCTCCTTCACGGGCCTCAGAGTTCAAGGCGTAAGAAAGCTGCAATATCTTCCTATTGGAGGAGGTTTCATTCAGCTTTGACTTCTTCCTGATTAATGCTTACTTCATCAGGTGCATTCATTTGTAGGTCAAATTTAGGCAAAcGTATTTTTCCACCTTGAAGCTGTGTTGGATTTTTTCAGACCCAATTGACACAGTAACTTGGTAAGCTCCTTCACGGGCCTCAGAGTTCAAGGCGTAAGAAAGCTGCAATATCTTCCTATTGGAGGAGGCTTCATTCAGCCACTGGCCAATCCTGTTGCTGTTAGAATCCTGTTAAGTGAAGTCAAGAACATGGGACAACGGGAAACTCGGGAATACAGGAAAAGTGGCATTTCTTCTTCCACAAGATGGCTGATTAAAGTGGGCCATTGCCATCTCTCACACGCACATCTCAGTGCCCAGTTACAGATATATATTGGTCTTTGTGTATAATGGGCATTTGTACAGAATTTGCTGCAAAAGTATA
>TU22398
CTTGCTTCATGAGACGGTCACCATAGCTACCGTACCTGCTTTGTCTCCTCGTAGCAAGGCATCGGGATTACAGAGACTCCCTCTGGATGTTCAGGGGTGATTGCACGGGGTATAACATAGGGATCAAAAGGTCGGCACACCTTCAAGTCAACACTGCCTGGCATCGGGATTACAGAGACTCCCTCTGGATGTTCAGGGGTGATTGCACGGGGTATAACATAGGGATCAAAAGGTCGGCACACCTTCAAGTCAACACTGCCTGGCACAGGCTGTCCGTATGTATACCTAATTAGATGACATGGAGAAAGA
>TU22399
TTGCACAGACTTCAGCTTTGACTTCTTCCTGATTAATGCTTACTTCATCAGGTGCATTCATTTGTAGGTCAAATTTAGGCAAcGTATTTTTCCACCTTGAAGCTGTGTTGGATTTTTTCAGACCCAATTGACACAGTAACTTGGTAAGCTCCTTCACGGGCCTCAGAGTTCAAGGCGTAAGAAAGCTGCAATATCTTCCTATTGGAGGAGGTTTCATTCAGCCACTGGCCAATCCTGTTGCTGTTAGAATCCTGTTAAGTGAAGTCAAGAACATGGGACAACGGGAAACTCAGGAATACAGGAAAAGCGGCATTTCTTCTTCCACAAGATGGCTGATTAAAGTGGGCCATGGTTTGGTGTAAAGTTGTACGAGTAGGAACACACGCAGGCTAATATCAGTGGCCAGTTAGATATATTGTCTTAGTGTATAATGGGCATTTGTACAGAATTTGCTGCAAAAGTATATACATTTGtgtcatttcctttttaaaagcaAGTTTTATGTAGTATGACAATCCTATCTTAACATTTGGTCCACTTTCTAGCTAGTCAGAGTTTTTCcaatgcaaaaataaataaataaagaaactcATCTAATGAACATTAGAGGCTGTTAATATCTCCAGAAAAGGTTTTCCCCCCACTTTTGTCAAACAGAAAATGCAGCCTGTAAAGCAAGAATTTGTGTCCAAGGTCATGCATGAATTCTTGTCATCGTTCATAAAGGTCTTGTTCAAGTTGTAAAACAGGCCTCCACACAACGTACTGGGTGTTTATCACATTTGATACCAGAATCTGTGAAACCTTCCATAAAGCTTGGGCCTGACCGCTTATAAGTCCCTTCATGTTTTTAGGAGATTAACATTCTGAACTTTTAATAGCCCAATAAGTCAACTGGAGCATTTTGCTTTAAGGCATTTGTATTAGAGAAAAAATACCCAGTATGTTAAAG
>TU22400
TTGCACAGACTTCAGCTTTGACTTCTTCCTGATTAATGCTTACTTCATCAGGAAGAAGTCAAAGCTGAAGTCTGTGCAACGTATACTTACGTGGCACAGACTTCAGCTTTGACTTCTTCCTGATTAATGCTTACTTCATCAGGTGCATTCATTTGTAGGTCAAATTTAGGCAAAcgtatttttccaccttgaagctgtgttgtattttttCAGACCCAATCGACACAGTAACTTGGTAAGCTCCTTCACGGGCCTCAGAGTTCAAGGCGTAAGAAAGCTGCAATATCTTCCTATTGGAGGAGGCTTCATTCAGCCACTGGCCAATCCTGTTGCTGTTAGAATCCTGTTAAGTGAAGTCAAGAACATGGGACAACGGGAAACTCGGGAATACAGGAAAAGTGGCATTTCTTCTTCCACAAGATGGCTGATTAAAGTGGGCCATTGCCATCTCTCACACGCACATCTCAGTGCCCAGTTACAGATATATATTGGTCTTTGTGTATAATGGGCATTTGTACAGAATTTGCTGCAAAAGTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22396 False 916 lncRNA 0.43 5 12157792 12260324
TU22398 False 309 lncRNA 0.41 2 12222801 12260324
TU22399 True 952 lncRNA 0.41 3 12157297 12222732
TU22400 False 539 lncRNA 0.42 4 12157792 12222732

Neighbor

gene id symbol gene type direction distance location
LOC120550222 NA coding downstream 42848 12106269 ~ 12114449 (-)
ints4 ints4 coding downstream 58110 12078206 ~ 12099187 (-)
LOC120550316 NA coding downstream 150866 11986415 ~ 12006431 (-)
dcun1d5 LOC106964839,LOC103138233,LOC106911103,LOC103475081,LOC108248937,LOC103377933 coding downstream 251008 11887489 ~ 11906289 (-)
capn5a capn5,LOC100709916,LOC102310670,LOC106535735 coding downstream 291363 11813279 ~ 11865934 (-)
myo7aa myo7a,LOC101484135,LOC100692718 coding upstream 28333 12288657 ~ 12386040 (-)
clns1a clns1a coding upstream 135615 12395939 ~ 12411272 (-)
rsf1a LOC104946006,LOC107735935,LOC107600325 coding upstream 158781 12419105 ~ 12438539 (-)
LOC120551266 NA coding upstream 286494 12546818 ~ 12567602 (-)
LOC120554543 NA coding upstream 288123 12548447 ~ 12548637 (-)
G16451 NA non-coding downstream 1019 12145050 ~ 12156278 (-)
LOC120550557 NA non-coding downstream 3435 12152374 ~ 12153862 (-)
LOC120550567 NA non-coding downstream 89894 12040024 ~ 12067403 (-)
G16402 NA non-coding downstream 304167 11844936 ~ 11853130 (-)
G16383 NA non-coding downstream 344921 11809923 ~ 11812376 (-)
G16525 NA non-coding upstream 134166 12394490 ~ 12394837 (-)
G16528 NA non-coding upstream 153160 12413484 ~ 12415913 (-)
G16531 NA non-coding upstream 183305 12443629 ~ 12444009 (-)
G16554 NA non-coding upstream 315909 12576233 ~ 12576583 (-)
G16676 NA non-coding upstream 562105 12822429 ~ 12822922 (-)
G16422 NA other downstream 123535 11989018 ~ 12033762 (-)
G16407 cul5,LOC101165410,LOC108248946 other downstream 201719 11949337 ~ 11955578 (-)
G16143 LOC103372137,LOC102304476 other downstream 1732527 10373568 ~ 10424770 (-)
LOC120574316 NA other downstream 1826450 10318834 ~ 10330847 (-)
LOC120574297 NA other downstream 1955713 10184003 ~ 10201584 (-)
LOC120554324 NA other upstream 226693 12487017 ~ 12487180 (-)
LOC120554526 NA other upstream 228549 12488873 ~ 12489063 (-)
LOC120554512 NA other upstream 229526 12489850 ~ 12490013 (-)
LOC120554552 NA other upstream 239659 12499983 ~ 12500146 (-)
LOC120554527 NA other upstream 242846 12503170 ~ 12503360 (-)

Expression


Co-expression Network