G16458


Basic Information

Item Value
gene id G16458
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 12225059 ~ 12262775 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22426
TGACGAGAACAGCCTTTGCCACATGTCTGGTTCTTCTCAGGCTGACCTTTTGACTGAAGCACTGCTCGGTAGAGAAGTCCGCGCTGTTGGCGATCACCGTCTCACTGGGGAGGACGGCGTAAGCCACGACCTGGACGTCTGGCGCCATGTCTGGAGACACCTTTTGACTGAAGCACTGCTCGGTAGAGAAGTCCGCGCTGTTGGCGATCACCGTCTCACTGGGGAGGACGGCGTAAGCCACGACCTGGACGTCTGGCGCCATGTCTGGAGACACCGTCAGCTTAAAGGACACCTCGCCCTCATTCACTGAAACAACAATCGCTCACATGACTCCATAGATCGGCCAGGCTAACTCAAAAGGATACTGACAAGACAAGTCACTTTGCTCACCCAATTTATCTTTGATTTCCACCCGTT
>TU22428
CTGGAAAACTGTATAAGCGTCAGCTGTCCCATCACCTCTGGGGTATGGCAAAATAGATCTTCTCGGTCTCACAGGCAAACATTCTACACTGTCTTCAACGTCATATGGAATATAGGACATTTTTGTGACCGGCAACAATTGAAATATCTTTGTCTGCATTCAGAGTCTTCCCTGGCTCCTTGATGAGGACGCTCTGGTCAACAGCGCTCACGCCACACAGAGATTCTGGCTGGGTGGTAACCCGCATGATGGTCTCCTCTCCTGGGACGGCCGAGGACGGAGAAAACGCCAGCGACACCTTTGACTGAAGCACTGCTCGGTAGAGAAGTCCGCGCTGTTGGCGATCACCGTCTCACTGGGGAGGACGGCGTAAGCCACGACCTGGACGTCTGGCGCCATGTCTGGAGACACCGTCAGCTTAAAGGACACCTCGCCCTCATTCACTGAAACAACAATCGCTCACATGACTCCATAGATCGGCCAGGCTAACTCAAAAGGATACTGACAAGACAAGTCACTTTGCTCACCCAATTTATCTTTGATTTCCACCCGTT
>TU22429
CTGGAAAACTGTATAAGCGTCAGCTGTCCCATCACCTCTGGGGTATGGCAAAATAGATCTTCTCGGTCTCACAGGCAAACATTCTACACTGTCTTCAACGTCATATGGAATATAGGACATTTTTGTGACCGGCAACAATTGAAATACTTGTCTGCATTCAGAGTCTTCCCTGGCTCCTTGATGAGGACGCTCTGGTCAACAGCGCTCACGCCACACAGAGATTCTGGCTGGGTGGTAACCCGCATGATGGTCTCCTCTCCTGGGACGGCCGAGGACGGAGAAAACGCCAGCGACACAATCTGACGAGAACAGCCTTTGCCACATGTCTGGGTTCTTCTCAGGCTGACCTTTTGACTGAAGCACTGCTCGGTAGAGAAGTCCGCGCTGTTGGCGATCACCGTCTCACTGGGGAGGACGGCGTAAGCCACGACCTGGACGTCTGGCGCCATGTCTGGAGACACCGTCAGCTTAAAGGACACCTCGCCCTCATTCACTGAAACAACAATCGCTCACATGACTCCATAGATCGGCCAGGCTAACTCAAAAGGATACTGACAAGACAAGTCACTTTGCTCACCCAATTTATCTTTGATTTCCACCCGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22426 False 417 TUCP 0.54 2 12225059 12262775
TU22428 False 554 lncRNA 0.51 3 12225059 12226502
TU22429 True 604 lncRNA 0.51 3 12225059 12226502

Neighbor

gene id symbol gene type direction distance location
LOC120550388 NA coding downstream 25395 12198103 ~ 12199664 (-)
LOC120550222 NA coding downstream 110610 12106269 ~ 12114449 (-)
ints4 ints4 coding downstream 125872 12078206 ~ 12099187 (-)
LOC120550316 NA coding downstream 218628 11986415 ~ 12006431 (-)
dcun1d5 LOC106964839,LOC103138233,LOC106911103,LOC103475081,LOC108248937,LOC103377933 coding downstream 318770 11887489 ~ 11906289 (-)
myo7aa myo7a,LOC101484135,LOC100692718 coding upstream 25882 12288657 ~ 12386040 (-)
clns1a clns1a coding upstream 133164 12395939 ~ 12411272 (-)
rsf1a LOC104946006,LOC107735935,LOC107600325 coding upstream 156330 12419105 ~ 12438539 (-)
LOC120551266 NA coding upstream 284043 12546818 ~ 12567602 (-)
LOC120554543 NA coding upstream 285672 12548447 ~ 12548637 (-)
G16454 NA non-coding downstream 5144 12155488 ~ 12219915 (-)
LOC120550525 NA non-coding downstream 6285 12217703 ~ 12218774 (-)
G16451 NA non-coding downstream 68781 12145050 ~ 12156278 (-)
LOC120550557 NA non-coding downstream 71197 12152374 ~ 12153862 (-)
LOC120550567 NA non-coding downstream 157656 12040024 ~ 12067403 (-)
G16525 NA non-coding upstream 131715 12394490 ~ 12394837 (-)
G16528 NA non-coding upstream 150709 12413484 ~ 12415913 (-)
G16531 NA non-coding upstream 180854 12443629 ~ 12444009 (-)
G16554 NA non-coding upstream 313458 12576233 ~ 12576583 (-)
G16676 NA non-coding upstream 559654 12822429 ~ 12822922 (-)
G16422 NA other downstream 191297 11989018 ~ 12033762 (-)
G16407 cul5,LOC101165410,LOC108248946 other downstream 269481 11949337 ~ 11955578 (-)
G16143 LOC103372137,LOC102304476 other downstream 1800289 10373568 ~ 10424770 (-)
LOC120574316 NA other downstream 1894212 10318834 ~ 10330847 (-)
LOC120574297 NA other downstream 2023475 10184003 ~ 10201584 (-)
LOC120554324 NA other upstream 224242 12487017 ~ 12487180 (-)
LOC120554526 NA other upstream 226098 12488873 ~ 12489063 (-)
LOC120554512 NA other upstream 227075 12489850 ~ 12490013 (-)
LOC120554552 NA other upstream 237208 12499983 ~ 12500146 (-)
LOC120554527 NA other upstream 240395 12503170 ~ 12503360 (-)

Expression


Co-expression Network