G16464


Basic Information

Item Value
gene id G16464
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 12413499 ~ 12415940 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22448
CCTGGGATGTTGGTTTTAATAACTTAGAAAACATTTATGTTACAGCAATACTACAGTAACAGTACAACAGAGAAATGGAAGGAGCCACATTCACATCCAGTGGTGCCTGTTTGAATGCAGATTAAGTCGgactgaacattttaaaaccaaCGGATTCTGCCACAGAGCCGAACACAGATGCACACCAGGTTCAGTGGAATGATTTGGGACCGGTGGCATAAACACATTAATCTCAAATCTGGAGTAACAGTCCGAGTACTCTAAAAGGGTTGGTTCTGCCTCAGTGTAACCTAAATTAAAATCTTTAGGGGGCTGCAGTCTTATCTTTTGAGTACCGAGAGTCCAGTTGAGCTGATAAATGATATAAACGATATAAAATCACCATGATGATCAAGAGGCTGCACGGCCACATTAAGGGGATTTTCCAAAAACAGCCTTTTTATTAAATCTAGAGGTTGTATTTGCGATGAGATAACCCATGCTTAGAAAGTAAACCAGCTAATGAGCATttttagattcttttttttttttatttaatttttttttttaaacaaaggaGTCCCACAACACCTGAACCACTTTAGGAAAGTACCTGAAAGAACATCTAGTAATTTAACCGGCTGTGAACTTCAAACGTCTAGAGCCCACTTTTATCTAAAAGTGAGCGAGCAAGGCCAGTATGTAAAAGTAATTCCAGTTATCAATTCAACAATTAAATCTTATTTAATGCTTTTGGCAAACTGAGAAGTTCCACTGCACAAATCATGCATTTGTGACCCAAaactaaagatttttttttattttttaaaaaggtgatAATTTTCAGATTTTTCTTCCCCTCTCAACGTCTCCAAAGCTAAATGTAAACCACTGATATAATCTGAGATATAGACTTGATTTCTGTTTAAATCATTACAGTATGTTCTTCAAAAGGTACCATAAAGGATACTGTCAAACAACATTTGTCCTGACTAAAGTTTCAGACCATGATCTAATTATTAGGATTAGTGGTAAAGGTCTCTACGGTTGTTGAACTACAGCTTTCACATCGTTAAGATAAGATTGGTACATTCAGGCAACGATAATTAAGTGCCTGACTCACTAAAAAGTTTtttgaaatgaaacaaaagTAGGAAAAGAAATGAACTTCCTTCTTATCTGACGGTTTCTCTTTATGTGCATTTTTCCCCCCCTACATGTTCTGCTCTCTGAGAAGTGACAGAAGCATCTTCCCACGTATGTTATGTTACAAAATACACTTTTGGTGGCCATAAACTCTGCACAGAAAACACTTCTTAAAAAGAGAATCGCACCAACATCGTCCTTCAACTCTTTACCGTATAAAAGTAGATGTTTTTCAAATGGATGACTGGCTTTGTTTTCGTCGGGTGTCCTAAGGTTTGGGACATCTTAAAGGGATATgtcaccgtttgttgaaatagtttttatcacagtctcccctagctgtagatagggggggccaacgcattttgtgtgcatgcattgttttagtccggtgcaacaccggcagcgccgccgctagttagcttagcgtagtgaatggaatcctatgttgccggttagcatgttgtgagtaaaagtgagccaacaaaagacaaaaaaaaacaacctaattacttgcactgagacaaaaaaatgcgttggcccacctatccacagccaggggagaccgtgataagaactatttcaacaaactgtggagtatccctttaagataaagaaagaaaagaacgcCTTGTTTGAAACCTGGCTGGTTTGAGGAGCATTACAGGAATGATATTTGCATTtagtttctttaaaaacaaacgtATGTCAGAAAGCTTCCAACGTTGGTAAGAGAGTGAAGTAACTTGGACGAAGCCCAATTCAAATATAATCATACTTGAATGTTTTTTGGGAACTTCAGCTGAGTGCTGTTGTGTTTGGAGCCAGGACtctttttgaaaatgaagaGAAACTCTGCAGCATCTCCCATCTCGTCAGATCACAGCTGCAGTCTGATCTGGGCCCGTATTTATCAAAACTGCTAATAGTGACATTTGGGATTTAAGATTAAAAGTAACAATCCTTTACTTCTGCTCCTGAATATCCTTAAAAACTATTCAGAACATTTCTTATGACTTAAAAATGCATCTTCTGAGACACATTTTTAGTGATTGTAGAAATAATTTGTGTGAATTTGTTAGCGGAGGAAATATTTATAATTCTGAATCCTGTAGTTTTAGCCGGTTTTCATTGGATTGTCTGAACTTGTCAATGCTATAAGTAGTTCTCCTTAATATGAGTTTTCTCTGATGTACAATTTAGTTCCCGCttcagtttagtttt
>TU22449
CCTGGGATGTTGGTTTTAATAACTTAGAAAACATTTATGTTACAGCAATACTACAGTAACAGTACAACAGAGAAATGGAAGGAGCCACATTCACATCCAGTGGTGCCTGTTTGAATGCAGATTAAGTCGgactgaacattttaaaaccaaCGGATTCTGCCACAGAGCCGAACACAGATGCACACCAGGTTCAGTGGAATGATTTGGGACCGGTGGCATAAACACATTAATCTCAAATCTGGAGTAACAGTCCGAGTACTCTAAAAGGGTTGGTTCTGCCTCAGTGTAACCTAAATTAAAATCTTTAGGGGGCTGCAGTCTTATCTTTTGAGTACCGAGAGTCCAGTTGAGCTGATAAATGATATAAACGATATAAAATCACCATGATGATCAAGAGGCTGCACGGCCACATTAAGGGGATTTTCCAAAAACAGCCTTTTTATTAAATCTAGAGGTTGTATTTGCGATGAGATAACCCATGCTTAGAAAGTAAACCAGCTAATGAGCATttttagattcttttttttttttatttaatttttttttttaaacaaaggaGTCCCACAACACCTGAACCACTTTAGGAAAGTACCTGAAAGAACATCTAGTAATTTAACCGGCTGTGAACTTCAAACGTCTAGAGCCCACTTTTATCTAAAAGTGAGCGAGCAAGGCCAGTATGTAAAAGTAATTCCAGTTATCAATTCAACAATTAAATCTTATTTAATGCTTTTGGCAAACTGAGAAGTTCCACTGCACAAATCATGCATTTGTGACCCAAaactaaagatttttttttattttttaaaaaggtgatAATTTTCAGATTTTTCTTCCCCTCTCAACGTCTCCAAAGCTAAATGTAAACCACTGATATAATCTGAGATATAGACTTGATTTCTGTTTAAATCATTACAGTATGTTCTTCAAAAGGTACCATAAAGGATACTGTCAAACAACATTTGTCCTGACTAAAGTTTCAGACCATGATCTAATTATTAGGATTAGTGGTAAAGGTCTCTACGGTTGTTGAACTACAGCTTTCACATCGTTAAGATAAGATTGGTACATTCAGGCAACGATAATTAAGTGCCTGACTCACTAAAAAGTTTtttgaaatgaaacaaaagTAGGAAAAGAAATGAACTTCCTTCTTATCTGACGGTTTCTCTTTATGTGCATTTTTCCCCCCCTACATGTTCTGCTCTCTGAGAAGTGACAGAAGCATCTTCCCACGTATGTTATGTTACAAAATACACTTTTGGTGGCCATAAACTCTGCACAGAAAACACTTCTTAAAAAGAGAATCGCACCAACATCGTCCTTCAACTCTTTACCGTATAAAAGTAGATGTTTTTCAAATGGATGACTGGCTTTGTTTTCGTCGGGTGTCCTAAGGTTTGGGACATCTTAAAGGGATATgtcaccgtttgttgaaatagtttttatcacagtctcccctagctgtagatagggggggccaacgcattttgtgtgcatgcattgttttagtccggtgcaacaccggcagcgccgccgctagttagcttagcgtagtgaatggaatcctatgttgccggttagcatgttgtgagtaaaagtgagccaacaaaagacaaaaaaaaacaacctaattacttgcactgagacaaaaaaatgcgttggcccacctatccacagccaggggagaccgtgataagaactatttcaacaaactgtggagtatccctttaagataaagaaagaaaagaacgcCTTGTTTGAAACCTGGCTGGTTTGAGGAGCATTACAGGAATGATATTTGCATTtagtttctttaaaaacaaacgtATGTCAGAAAGCTTCCAACGTTGGTAAGAGAGTGAAGTAACTTGGACGAAGCCCAATTCAAATATAATCATACTTGAATGTTTTTTGGGAACTTCAGCTGAGTGCTGTTGTGTTTGGAGCCAGGACtctttttgaaaatgaagaGAAACTCTGCAGCATCTCCCATCTCGTCAGATCACAGCTGCAGTCTGATCTGGGCCCGTATTTATCAAAACTGCTAATAGTGACATTTGGGATTTAAGATTAAAAGTAACAATCCTTTACTTCTGCTCCTGAATATCCTTAAAAACTATTCAGAACATTTCTTATGACTTAAAAATGCATCTTCTGAGACACATTTTTAGTGATTGTAGAAATAATTTGTGTGAATTTGTTAGCGGAGGAAATATTTATAATTCTGAATCCTGTAGTTTTAGCCGGTTTTCATTGGATTGTCTGAACTTGTCAATGCTATAAGTAGTTCTCCTTAATATGAGTTTTCTCTGATGTACAATTTAGTTCCCGCttcagtttagtttttgttgtttccaTAAAAGTGAATTTCCAattatttcatatatatatatatatatatatatatatatatatatatatatatatatatatatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22448 False 2349 lncRNA 0.37 1 12413499 12415847
TU22449 True 2442 lncRNA 0.50 1 12413499 12415940

Neighbor

gene id symbol gene type direction distance location
aqp11 aqp11,LOC102780836 coding upstream 19661 12388572 ~ 12393838 (+)
LOC120550477 NA coding upstream 139676 12255637 ~ 12273823 (+)
LOC120550122 NA coding upstream 177748 12218910 ~ 12235751 (+)
LOC120550138 NA coding upstream 239803 12144299 ~ 12173696 (+)
aamdc aamdc,LOC102795396 coding upstream 335624 12073618 ~ 12077875 (+)
LOC120552565 vstm5 coding downstream 153189 12569129 ~ 12573338 (+)
cep295 NA coding downstream 171673 12587613 ~ 12614479 (+)
LOC120554572 NA coding downstream 206857 12622797 ~ 12622987 (+)
trnak-uuu_2 NA coding downstream 581856 12997796 ~ 12997868 (+)
trnak-uuu_4 NA coding downstream 587395 13003335 ~ 13003407 (+)
LOC120550541 NA non-coding upstream 212608 12199794 ~ 12200891 (+)
LOC120550493 NA non-coding upstream 276165 12132351 ~ 12137334 (+)
LOC120550573 NA non-coding upstream 312922 12099978 ~ 12100577 (+)
G16293 NA non-coding upstream 384374 12022221 ~ 12029125 (+)
G16292 NA non-coding upstream 385872 12012498 ~ 12027627 (+)
G16463 NA non-coding downstream 70 12416010 ~ 12420722 (+)
G16484 NA non-coding downstream 50515 12466455 ~ 12466745 (+)
G16511 NA non-coding downstream 151854 12567794 ~ 12568464 (+)
G16559 NA non-coding downstream 192573 12608513 ~ 12609663 (+)
G16566 NA non-coding downstream 221253 12637193 ~ 12640466 (+)
G16467 clns1a,LOC102781126 other upstream 4225 12395995 ~ 12409274 (+)
G16267 NA other upstream 512626 11894504 ~ 11900873 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 1908161 10388232 ~ 10505338 (+)
G15712 NA other upstream 2409904 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 2410127 9866710 ~ 10003372 (+)
LOC120552034 LOC104947607 other downstream 26190 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 214734 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 452890 12868830 ~ 12922469 (+)
hif1al NA other downstream 691922 13107862 ~ 13137034 (+)
zc3h4 NA other downstream 924560 13340500 ~ 13359989 (+)

Expression


Co-expression Network