G16573


Basic Information

Item Value
gene id G16573
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 12652690 ~ 12658070 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22590
CTTTGTTGTCCtaattttagccgtgtttattTCTGTGCATGTACATTGACAGCGACAAaccaaattccttgtatgtgtacacATTCTACATAAAAATATCTGAAGTTTGTGATGACATTATGCCTGTAGTTTGAAAGActtaatataattgcataaaagTACAGCAACAAACTGCcatatgtatatagtaCACCACTAATTAAACATATGTAATGAAAACTGCGGATATCTTGACATCTTTTAAAAGTACCATAGCAAAACAAACGGGTGAAATAAAACCACTGAGGTACGTTGAAGGGGTTTATTCAAAACTGAAACTGCCACTGTCTTACAGTATAAGCCAGGAACAGAACAAAACTGTTAAAGCAGCCCTTACAGAAATCAAACTTCagcactgtattttttttaaaattaaaagtcaAACAAAATCGGAGATTCAACACATGGGGAAAATCCATTCAGCACACCGTAAAGCTGATGAGGTTCATAAAAGGGGGCAGTGCAGCACAGAAACAACAAACAGGAATGTGACTACATATTCAAAGGCATGCAGGCCAGCAACTACCTCCTTATGCCATCATGAGTGGAAACATTAAACGGCAGCTTAACCTAAAAATTCAAATTGGAgagcaatacaaaaaaaaaaaaaattgtttgccGATTCTCAATGGGGAAAATATTTTGATGGTTTAGAAATTTTAGGGAATAAAAGCAGTTTTCAATGCAATGTCTTCACTCTCAAACGCTGCATCAACTGGGCTATCTTCCACAGAAAGTGTACTGTACAAGCTACTCATATCACTGCTAAAAGCCAATGGCAACATTCAGTATCACCTTAACACAGGTGTTGCTTCTTACACTTGCTACAGCACGCGTCTtcagagaagaaagaggacctATGCAACAGCAGTACACTTTCTATCAAATGGAAACTGATTTTGTCTGCTAAACTGACTAATTCTTCAACAATCTGAGGCTGCACGAAGACTACTAGTCCTGGGgagaaaaataatcttaaaaaagacTGGGACTAAACAGACAAAGTACAAAAAACAGCTGCTGTAGGGCTGTGAAAGCAGACGGGGTGCAGAGTAGAGGGTCTGTCTGTTAAGGAACTAATAAGTCTTCTTCACTCAGTCGTCTGCCGGCGTGGGGCTTCGGTGTGGACTTGCTGTACGGGAACGACTTTGGAGACAGTGGCAGAAACAACAAGTACAGAGAAGCGAAGGATGAAAGGACTGTAGGACGGACGACTACAACTCGGAGAGACACTGCGCTGGGAGGCTCTTGAAGACTGATCTCTCGTCAGCTCTCTTTCAGAAGCTAAGACAGAGGCCGAAGAACTCTGGTAGGTAGGGGGGTCTGGTAGGTAGGTAATGGATTTAAAAAGGTAGCGGTCGAACTCTGATCTGTGTGGGTCAGCCCTCTGGTACATCTGAAGGCTGGCTGGCTGGGTGACTCTAGTAGAACTCTAGTAGAACAACTGTATGTGTGCACGGGCTGATCTCGTCTTAGCGTGTGCGTCGGTTGAACAGACGGTCACCCATTTACTGTGGGGAGGGTTCGGTCGGTAGGTCGACCTCTTTCTCGCTGTCTAACACCAGATGCAGACGAAGGCTGATCTCAGGTCAGCGCTTAGTCACCCTCCCGCAGGACGTACACACCGCCAGCTGGCAGACCCTGGGCCTGGGATCAGCTGTGGTGTCAGTGCGGTGCTCAGCTCCCACCACACGctttaaagaaaatatgaaaaataaacaaaactgtgCTGCAAAGATGCTTAACTTAAGTCACACCAATGGTGTCGTTTTGTCTGATATCAGCTAATAGTTTTCTGGAGAGTTCTCTTGCTCTAGCCAAATTCAGGatagggaattttttttttaacagttacaATACTACCTCTGACCATCTTTACTTTGCACTTGTCAATCCAATAAATACAATTTTTCTGTAGAATTGAGCTACATCTAGGGTGGGTGAggttaaagaaaagaaagagtacAGAGGATATTTGTGCATCTCACTGGTTTTAACGTTTAGAGTCTGAAAAGTTTACATGCTATATCTTTCGTGTGCTCTATTATCAAGATCAAGTGAGACTGATTAAGAGCTACACTGAGATTAAACAGTGCACAGCTATCAAGAGTTGGAAAAGAGCACAAGAGAGAGAGGTCTAATCTTTCATCTAAGTATACTTCTCTACACCAGACAGAGCTCCCAAGTCACTGTCCTCTACCCCACTCCACTGCTGGCCAACAGCAGAGGCAGAAGATGCAGATCTCTCTGTGTCGAGGAGGTGGATGGGTCTTGGCGGTCGTCCATCTCACCGTCAAGTGGGGGTTGTTTGGAGGCAGCATGACGCTCCGCGTAGAAGGAGGGTCTATTTAATAGTCATTCCCTGCCTAGGATGGAGCACCTAGTTCTGGCTAACGTGAAGAACATCTGACTGTCTTGGAACGCAAGATAGTTGTGGTCTCAACTGCGATATCTATATCAATAATTgttaatatagaccttactggCGCTTCTTCCTACTGAGGTGTTAAGTCTAAAATGTCTTGGTAAAACACTGACAACTGGCAGGACTAAACActagacatttatttaacagCCTACACCCTGTTTCAGTGAATGAGAGACATCTAGACTGAGGGTTTACCTGTTCCTCTTGTGATTGGCTGCTGGAGATCGTGAGCGAGATCGGGAGGGAGAGCGTCGTCTGGGCGCAGAGCCGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22590 True 2740 lncRNA 0.44 3 12652690 12658070

Neighbor

gene id symbol gene type direction distance location
LOC120554572 NA coding upstream 29703 12622797 ~ 12622987 (+)
cep295 NA coding upstream 38211 12587613 ~ 12614479 (+)
LOC120552565 vstm5 coding upstream 79352 12569129 ~ 12573338 (+)
aqp11 aqp11,LOC102780836 coding upstream 258852 12388572 ~ 12393838 (+)
LOC120550477 NA coding upstream 378867 12255637 ~ 12273823 (+)
trnak-uuu_2 NA coding downstream 339726 12997796 ~ 12997868 (+)
trnak-uuu_4 NA coding downstream 345265 13003335 ~ 13003407 (+)
LOC120551276 LOC101468279,LOC102195252,LOC100709375 coding downstream 383118 13041188 ~ 13087372 (+)
zmp:0000000529 LOC102308420,LOC102195538,LOC105930185,LOC107092488,LOC101077945 coding downstream 430837 13088907 ~ 13099538 (+)
bbc3 NA coding downstream 629809 13287879 ~ 13305829 (+)
G16570 NA non-coding upstream 1572 12647974 ~ 12651118 (+)
G16568 NA non-coding upstream 6672 12641682 ~ 12646018 (+)
G16566 NA non-coding upstream 12224 12637193 ~ 12640466 (+)
G16559 NA non-coding upstream 43027 12608513 ~ 12609663 (+)
G16511 NA non-coding upstream 84226 12567794 ~ 12568464 (+)
G16579 NA non-coding downstream 32640 12690710 ~ 12691107 (+)
G16616 eif3k non-coding downstream 366146 13024216 ~ 13030731 (+)
G16625 NA non-coding downstream 506766 13164836 ~ 13168275 (+)
G16626 NA non-coding downstream 512424 13170494 ~ 13171528 (+)
G16628 NA non-coding downstream 517630 13175700 ~ 13176373 (+)
LOC120554522 NA other upstream 21826 12630674 ~ 12630864 (+)
LOC120552034 LOC104947607 other upstream 196107 12442130 ~ 12456583 (+)
G16467 clns1a,LOC102781126 other upstream 243416 12395995 ~ 12409274 (+)
G16267 NA other upstream 751817 11894504 ~ 11900873 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 2147352 10388232 ~ 10505338 (+)
G16590 actn4,LOC102210441 other downstream 210760 12868830 ~ 12922469 (+)
hif1al NA other downstream 449792 13107862 ~ 13137034 (+)
zc3h4 NA other downstream 682430 13340500 ~ 13359989 (+)
G16788 LOC103364096,LOC103373880 other downstream 898209 13556279 ~ 13562415 (+)
G16981 LOC104952532,LOC103377862,LOC106581065,LOC106612819 other downstream 1777977 14436047 ~ 14441693 (+)

Expression


Co-expression Network