G16626


Basic Information

Item Value
gene id G16626
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 13170494 ~ 13171528 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22653
AGAGAAAATTCATTTGTTAAAAAGACCACAACTCCAGTGTTTACCTTTTGACTTAGTGTATGTTTGCTTGTTTACAACAGGAAGCTAGTATTTATATGGCTACAAAATAAAGTCCGTCCGACTCTTTTCTGAGTCAAAAAGAGTTCCTCCCTCAGTAGTAAGTTCTGGCTGTGATGAGGATAGCGTCCGAGTCTTGGATCCGTCTGCGCGACAAGTCTTTGTAGTGAGAAAATTCGGCTTCCAAACCGTCTAAGAGTGGGATTAAAATGTCGCTCCGCCACTCTCAGCCAATGGGCTCACGGCTCCTTCAAAAAGCATCCATTCGGTGTGCAAAACCCCACCTTCACACTTAAAATCCAGTCGAGGTCCAaatggaaatataaaaacagcaacaatCTTTCCAGGTATTCagttaaaacaaaatgttcatATGAAATTGGCTAAAATCACTTGACAGGGCAAGTTGTGTTCTCTGCTCTCACACATGCCATGAAACACTGTCAAGAACAGTGTTGCCAACATAtgttctctcacacacacagacccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagccttatTGCCTCTTATTAAGGGAGAACACTCCCCAGAGTTCAGTGATTcacataagaaaaaaagaatactcCTGCACACCCGGTTTGCACTTTGCAGCTCACGGCTCTTTCTGAGAGTTTCGCCCGAAGCACACACACCTCTCATctatgacctctgacctctttgGGCCGCCTCTCTGTGTGCAGGAGTATTCTATTCCATCTGAACCTGCACACGCTGCCCTCCACAGTCTGGAGATCTTATCGTTACGCGTCTCATCTCATCCTGTTCTGCCTCATCAGTGGGACGATGCAGGACGGCGGACCCGCCTTCGTCAGGAAGGGGTGTTTAAGAAGCTCGCTGGCCGAGGCCCTCTGAGCCGGGTCCCGCACCAACATCCTGTCCAGGAAGCCCTTGAGCAGAGGGGAGACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22653 True 1035 lncRNA 0.53 1 13170494 13171528

Neighbor

gene id symbol gene type direction distance location
zmp:0000000529 LOC102308420,LOC102195538,LOC105930185,LOC107092488,LOC101077945 coding upstream 70956 13088907 ~ 13099538 (+)
LOC120551276 LOC101468279,LOC102195252,LOC100709375 coding upstream 83122 13041188 ~ 13087372 (+)
trnak-uuu_4 NA coding upstream 167087 13003335 ~ 13003407 (+)
trnak-uuu_2 NA coding upstream 172626 12997796 ~ 12997868 (+)
LOC120554572 NA coding upstream 547507 12622797 ~ 12622987 (+)
bbc3 NA coding downstream 116351 13287879 ~ 13305829 (+)
zgc:154093 NA coding downstream 212672 13384200 ~ 13395559 (+)
ercc2 ercc2 coding downstream 230117 13401645 ~ 13417034 (+)
ckmb ckm,LOC104935593,LOC107094873 coding downstream 287444 13458972 ~ 13464796 (+)
si:dkey-182i3.11 NA coding downstream 365663 13537191 ~ 13541026 (+)
G16625 NA non-coding upstream 2219 13164836 ~ 13168275 (+)
G16616 eif3k non-coding upstream 139763 13024216 ~ 13030731 (+)
G16579 NA non-coding upstream 479387 12690710 ~ 12691107 (+)
G16573 NA non-coding upstream 512424 12652690 ~ 12658070 (+)
G16570 NA non-coding upstream 519376 12647974 ~ 12651118 (+)
G16628 NA non-coding downstream 4172 13175700 ~ 13176373 (+)
G16627 NA non-coding downstream 48908 13220436 ~ 13228024 (+)
G16641 NA non-coding downstream 65478 13237006 ~ 13238958 (+)
G16717 NA non-coding downstream 101446 13272974 ~ 13273387 (+)
G16726 NA non-coding downstream 225076 13396604 ~ 13398177 (+)
hif1al NA other upstream 33460 13107862 ~ 13137034 (+)
G16590 actn4,LOC102210441 other upstream 248025 12868830 ~ 12922469 (+)
LOC120554522 NA other upstream 539630 12630674 ~ 12630864 (+)
LOC120552034 LOC104947607 other upstream 713911 12442130 ~ 12456583 (+)
G16467 clns1a,LOC102781126 other upstream 761220 12395995 ~ 12409274 (+)
zc3h4 NA other downstream 168972 13340500 ~ 13359989 (+)
G16788 LOC103364096,LOC103373880 other downstream 384751 13556279 ~ 13562415 (+)
G16981 LOC104952532,LOC103377862,LOC106581065,LOC106612819 other downstream 1264519 14436047 ~ 14441693 (+)
LOC120547056 axl other downstream 1437070 14608598 ~ 14638950 (+)
rasgrp4 hnrnpul1,LOC104955748,LOC103368736,LOC102790390 other downstream 1565574 14737102 ~ 14760824 (+)

Expression


Co-expression Network