G16627


Basic Information

Item Value
gene id G16627
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 13220436 ~ 13228024 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22656
ggCTAAATAAGAGAAACAAAAACTGCTAAAAGCAACTGCGTGCTTTACATTTCCTGTGGGTACAAACATTACAGCTCTCTCTGATGTGATGTTGgggacatttatttaattgatgGCTTTGATAAcattaaaaagctaaaattTTGGATTCATGCTAGTCCTGATAATCTTTCTGAAAACCGCAACCTTGTTAGTTCTTAAAACAATTTCATGTATCAAACAGGAAGACGTTGTAGAAATAGATTAACACGTTGAAATTTCTCCTGCCTAAGTTACAATCAGTCATCGAAGCTCAGAAAAACAAATATCCATATGCAAAACGGTTTTATAGCTCACAGGCTACATTTTGCCCCAAAGGTGGAATGTTCATTTCCATTTACAAACTGTACATATTGCCGTTCCTTTCGATCCAAATGCATAATTTCTATTCCTCTGATACAgaacacaaaaacattaaagcaacCCATTTATCCCAGCGTCCACAGGCATGATTCAAAGACTTTGCGGAAACCAAGCACACActcaaaaacaaaccaaaccaaaagcCCTTGATCTGCTGAGGTATGAGTGAAGGCTTTCATACCAAAATAAAACGGCTCTTTCTTTCTAAATAAGAGACAGTTATGTCCTCAAAACATGGCtgttaaacaaaaatatatatatttaacgtaAAGCCAATAACACTCATAACGTAAAGCGAGATCcttgattttaaaaacaattaaaaaggcAGTGTGTCCCCTATAGAGAGGGGAACTCTTCCCAGACGGATATGAAAAGATTTCTCTCTAGAAGTATGGATTCACAAAATGACAGCGCAGTCTGCGTCAGAGAAAATCAAAGTCACATCTTTTTAGTAATCATGATTgtgaattaaataatttaaaaacagcaaaTGGACCGCCGCCTCTAAGTACATAATAGGTATTTTGATGGATTTGAGACGAGGGGGATGTTGTAGCGAAGTGCCCTCAAGCAACACATCTTAATCAGTTAATCTGGGTGAGAACATCTCAGATGAATGGCTGCTCATTGAAGTCGGTTATTCAACAACAGCAGGCCTGCACAGCTGGCTCTGatgcaaaacataaaaaataaattacacttaAAACATCACGATATACCTGCTGCGAAGCTCATGTAAACGGTAGGGCTGAAGATTCTTATTTTTGAAAGATCTTTAGTGTGTCCAGATGTCTTTAGAAGTAAAAATATAAGAGTGTCAGTGGGTCGGATATAAAAACTATTTCCATGTCCCAATAAGTAAAAtccacaaaataaaaccaaagagcAATGCAGGCTGTAGGCTGGAGTCCCATCTCTGCATCATGAACACTGTTTCCTAGGTGCTACAGTGGAATTTAGTTATGCTGCTAGTATGCTGGTTCCTACGAGTGATTGTCTGTCCGCATcgacaaattaagaaaacatctacTTTCGATAGCTAGCCAGGATGTGAGGTCTTTCATTATGTTAGGTTTAAACTGGTGCATTAGGCCAAATTGAGTGACTACACATAATAACGTAACACTCCATTGGGTTTTTATTTGATCGCGGGTTACGTGATTGGCCACTGCAGCGAGACGTCGGGCTGCGTTTCTCCATAAAATTCATTCCGTTTCAACTTTTGCCCCTGCAcgtattttaaaaacaaaatccctTGCACTACCCACATTCAAATGAATGAGAGGACTGGCGTTTTCGCAGCAATGCCTGATTTGGTGTGAATGCAACCTAATGGTGATCACTGAGATTTGAAACAGTCACAAGATGGAAATCACTCACAGCCGAAGCTTTGAAGTTGCAACAAAAAGATCAGCGCAACTGCAACGAGAGGCGATTGTTTTGTGGTCTTGTTTTAGTCTCTAATCCAACACTGGGACTTGTAACCAACAGACAAAAACTGGCAACGCAATCAATATAAAAAAAGGTATTCCTCCGATATTACACAtcaaaagtctgtttacagaTGTTGgggatgtggaaaaaaaaaagctttataaaGCCTTTTCTTTGCTCCGGGGGGAGCTGCACAAAATCTGATAATCTGGGATACCTCTTGTCGGTGGTCaaattgcattgtgggtaacgTTATTGGCGTTCAGCGCTAAATCGGTGGAGTACTCTTTAAAAATATACCTACAGTAGTAGCAGCTATTAACACAGGCTTCTATTAAATACGTTATCCGTGTTTACAACAAGACAGAAGGTCGCCACATGCTATGGTTAACTCGTTAAGCTGGCACTAGTTAAGAGGCTGAATTAATCCAATCAATCGTTAATGAAGGGATTATTTTCaagacaaaacacagaaatgAGCCACATCTGTTCTGTTCCTGAGACAGCTGAGCGGtatgtttaaaaagaaaaaaaaaagaaaaaggggggaGATTTGGCTTGTCGCCGACTTCTGTGAAGTTTTCGAGGGTGTCATTTTTCTTAAACGATCGGTGAAAACATATCTACACGTGTGGTCTTTTGGACAAAATCAAATGACGCTCCGTTCATTTTACCAGCCCAGAAAACCTTGAGACTCCACGGTGagaacaaaacattttgaaaaccagCGACTGACGCCGATTTCACTCTTCGTATCTTAATacttaacagagagagacaaagcaTGGCGGCGGCCCAGAGGTGATCAGACCCACTGATCCAAAAGAAACagctgagagagagtgagagagagagaggtccgTCCACGGCGGCGGCACAGTCCGTCTCATGTTTCCATCCGCCTCAGAAGTGAGTCCGTTTGTTCCCAGCAGCTTCAGCCTGttgacacaaacacaggcagtaagtggtgtgtgtgtgtgtgtgtg
>TU22658
aaaaaaaaaaaaaaaaaaaaaaaaaaaggggggaGATTTGGCTTGTCGCCGACTTCTGTGAAGTTTTCGAGGGTGTCATTTTTCTTAAACGATCGGTGAAAACATATCTACACGTGTGGTCTTTTGGACAAAATCAAATGACGCTCCGTTCATTTTACCAGCCCAGAAAACCTTGAGACTCCACGGTGagaacaaaacattttgaaaaccagCGACTGACGCCGATTTCACTCTTCGTATCTTAATacttaacagagagagacaaagcaTGGCGGCGGCCCAGAGGTGATCAGACCCACTGATCCAAAAGAAACagctgagagagagtgagagagagagaggtccgTCCACGGCGGCGGCACAGTCCGTCTCATGTTTCCATCCGCCTCAGAAGTGAGTCCGTTTGTTCCCAGCAGCTTCAGCCTGttgacacaaacacaggcagtaagtggtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22656 True 2825 lncRNA 0.49 2 13224934 13228024
TU22658 False 470 lncRNA 0.46 2 13220436 13228024

Neighbor

gene id symbol gene type direction distance location
zmp:0000000529 LOC102308420,LOC102195538,LOC105930185,LOC107092488,LOC101077945 coding upstream 120898 13088907 ~ 13099538 (+)
LOC120551276 LOC101468279,LOC102195252,LOC100709375 coding upstream 133064 13041188 ~ 13087372 (+)
trnak-uuu_4 NA coding upstream 217029 13003335 ~ 13003407 (+)
trnak-uuu_2 NA coding upstream 222568 12997796 ~ 12997868 (+)
LOC120554572 NA coding upstream 597449 12622797 ~ 12622987 (+)
bbc3 NA coding downstream 59855 13287879 ~ 13305829 (+)
zgc:154093 NA coding downstream 156176 13384200 ~ 13395559 (+)
ercc2 ercc2 coding downstream 173621 13401645 ~ 13417034 (+)
ckmb ckm,LOC104935593,LOC107094873 coding downstream 230948 13458972 ~ 13464796 (+)
si:dkey-182i3.11 NA coding downstream 309167 13537191 ~ 13541026 (+)
G16628 NA non-coding upstream 44063 13175700 ~ 13176373 (+)
G16626 NA non-coding upstream 48908 13170494 ~ 13171528 (+)
G16625 NA non-coding upstream 52161 13164836 ~ 13168275 (+)
G16616 eif3k non-coding upstream 189705 13024216 ~ 13030731 (+)
G16579 NA non-coding upstream 529329 12690710 ~ 12691107 (+)
G16641 NA non-coding downstream 8982 13237006 ~ 13238958 (+)
G16717 NA non-coding downstream 44950 13272974 ~ 13273387 (+)
G16726 NA non-coding downstream 168580 13396604 ~ 13398177 (+)
G16759 NA non-coding downstream 189249 13417273 ~ 13418264 (+)
G16790 NA non-coding downstream 334067 13562091 ~ 13649236 (+)
hif1al NA other upstream 83402 13107862 ~ 13137034 (+)
G16590 actn4,LOC102210441 other upstream 297967 12868830 ~ 12922469 (+)
LOC120554522 NA other upstream 589572 12630674 ~ 12630864 (+)
LOC120552034 LOC104947607 other upstream 763853 12442130 ~ 12456583 (+)
G16467 clns1a,LOC102781126 other upstream 811162 12395995 ~ 12409274 (+)
zc3h4 NA other downstream 112476 13340500 ~ 13359989 (+)
G16788 LOC103364096,LOC103373880 other downstream 328255 13556279 ~ 13562415 (+)
G16981 LOC104952532,LOC103377862,LOC106581065,LOC106612819 other downstream 1208023 14436047 ~ 14441693 (+)
LOC120547056 axl other downstream 1380574 14608598 ~ 14638950 (+)
rasgrp4 hnrnpul1,LOC104955748,LOC103368736,LOC102790390 other downstream 1509078 14737102 ~ 14760824 (+)

Expression


Co-expression Network