G16716


Basic Information

Item Value
gene id G16716
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 13254343 ~ 13255880 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22801
ctgttaatacaacacagctgataggttagtctctgttaatacaacacagctgataggttagactctgttaatacaacacagctgataggttagactctctctgttaatacaacacagctgataggttagtctctctctgttaatacaacacagctgataggttagtctctccctgttaatacaacacagctgataggttagtctctccctgttaatacaacacagctgataggttagactctctctgttaatacaacacagctgataggttagtctctctctgttaatacaacacagctgataggttagtctctgttaatacaacacagctgataggttagactctccctgttaatacaacacagctgataggttagtctctccctgttaatacaacacagctgataggttagactctcctgttaatacaacacagctgataggttagactctctctgttaatacaacacagctgataggttagactctctctgttaatacaacacagctg
>TU22803
ctgttaatacaacacagctgataggttagtctctgttaatacaacacagctgataggttagactctgttaatacaacacagctgataggttagactctctctgttaatacaacacagctgataggttagtctctctctgttaatacaacacagctgataggttagtctctccctgttaatacaacacagctgataggttagtctctccctgttaatacaacacagctgataggttagtctctccctgttaatacaacacagctgataggttagactctcctgttaatacaacacagctgataggttagactctctctgttaatacaacacagctgataggttagactctctctgttaatacaacacag
>TU22805
gtgtgttagattttattaaagtcacttttttgttctaaaaagccttttaaaatgtcaatgacgtcatacacatatacggccggagatactgctttacggcaagagtcccttcctttgttctctcgaggcatcgacaacacagctgataggttagtctctctctgttaatacaacacagctgataggttagtctctctctgttaatacaacacagctgataggttagtctctctctgttaatacaacacagctgataggttagactctctctgttaatacaacacagctgataggttagtctctccctgttaatacaacacagctgataggttagtctctccctgttaatacaacacagctgataggttagtctctccctgttaatacatgtgctagaaagaggtttgctaatgttttaaagaccacaccgaaatattcactctgatattcaggct
>TU22807
gtgtgttagattttattaaagtcacttttttgttctaaaaagccttttaaaatgtcaatgacgtcatacacatatacggccggagatactgctttacggcaagagtcccttcctttgttctctcgaggcatcgacaacacagctgataggttagtctctctctgttaatacaacacagctgataggttagtctctctctgttaatacaacacagctgataggttagtctctctctgttaatacaacacagctgataggttagactctctctgttaatacaacacagctgataggttagtctctccctgttaatacaacacagctgataggttagtctctccctgttaatacaacacagctgataggttagactctctctgttaatacaacacagctgataggttagtctctctctgttaatacaacacagctgataggttagtctctgttaatacaacacagctgataggttagactctccctgttaatacaacacagctgataggttagtctctccctgttaatacaacacagctgataggttagactctcctgttaatacaacacagctgataggttagactctctctgttaatacaacacagctgataggttagactctctctgttaatacaacacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22801 False 511 lncRNA 0.40 2 13254917 13255535
TU22803 False 368 lncRNA 0.39 2 13255028 13255535
TU22805 False 455 lncRNA 0.39 3 13254343 13255880
TU22807 True 641 lncRNA 0.40 2 13255028 13255880

Neighbor

gene id symbol gene type direction distance location
pak4 LOC103368331 coding downstream 43817 13170383 ~ 13210526 (-)
zgc:152863 LOC103368334,LOC104955327 coding downstream 92385 13145662 ~ 13161958 (-)
eif3k eif3k coding downstream 223698 13024216 ~ 13030645 (-)
zgc:85932 LOC102780342 coding downstream 232481 12989797 ~ 13021862 (-)
klc3 LOC104964758,LOC103368325 coding upstream 163071 13418951 ~ 13446001 (-)
mark4b mark4,LOC107094871,LOC103373878 coding upstream 209132 13465012 ~ 13530107 (-)
LOC120547238 LOC102785257,LOC103373880,LOC104952507,LOC105417105 coding upstream 285862 13541742 ~ 13555869 (-)
LOC120547251 NA coding upstream 300400 13556280 ~ 13567554 (-)
LOC120574245 NA coding upstream 312964 13568844 ~ 13574504 (-)
G16709 NA non-coding downstream 88749 13164817 ~ 13165594 (-)
G16688 NA non-coding downstream 117275 13015625 ~ 13137068 (-)
G16706 LOC101165163 non-coding downstream 128681 13123719 ~ 13125662 (-)
G16678 NA non-coding downstream 343170 12868881 ~ 12911173 (-)
G16676 NA non-coding downstream 431421 12822429 ~ 12822922 (-)
G16737 NA non-coding upstream 62183 13318063 ~ 13360219 (-)
G16751 NA non-coding upstream 140330 13396210 ~ 13398320 (-)
G16882 NA non-coding upstream 512019 13767899 ~ 13770080 (-)
G16888 NA non-coding upstream 649324 13905204 ~ 13905788 (-)
G16889 NA non-coding upstream 650024 13905904 ~ 13908030 (-)
slc8a2b LOC102291167 other downstream 398616 12664199 ~ 12855727 (-)
srsf7a srsf7,LOC103358184 other downstream 592153 12654605 ~ 12662190 (-)
LOC120544465 islr2 other downstream 624251 12625965 ~ 12630092 (-)
LOC120554539 NA other downstream 711888 12542265 ~ 12542455 (-)
LOC120554398 NA other downstream 712960 12541220 ~ 12541383 (-)
sae1 sae1 other upstream 57563 13313443 ~ 13335153 (-)
si:ch211-14c7.2 LOC103364094,LOC102787713,LOC101474093,LOC102298349,LOC106947863,LOC103138296,LOC106921473 other upstream 407027 13662907 ~ 13762368 (-)
G16871 blvrb other upstream 445763 13701643 ~ 13708040 (-)
G16880 NA other upstream 500069 13755949 ~ 13823057 (-)
gpr4 gpr4,LOC103368504,LOC104964910 other upstream 822697 14078577 ~ 14086764 (-)

Expression


Co-expression Network