G16726


Basic Information

Item Value
gene id G16726
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 13396604 ~ 13398177 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22820
cacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaattccggattatttacatggagtctggtgagtttggcgatagagattttggaaaaaggagtttactctttaacaaaaaggcctatgtctgtagggatcctttccataatgttgttagcgcttagaataataatctgagcctgtcatcGGCACAGTTCTTTAAGTGGACGCTAACTGACGCTGAACATTAGTAATCCTgtaggattacattgcagcccggttcgtggctgccggttacagcgttctcgctcaatactggaccaatttcaaagatttttcacattagtcacttagacaccgaTGCATGGGGAAAAtgtggtccaggttgaaaaataccgaaATGACCATTTAATGTGATGTACAgatattttttatacatagtTTAATAAATCCTTAAAGTCTTTGTAAAGATATAAGGAGGACAAAGGATGGAGAGAATGGAGGGTGGAGAAAATGTATTTCTCCAGAAGACTTGACAGCTGAGTTTAAAGGCCATTGAAAGATTTAAGAAAGGTGAGACGCAGATGGACATTGTTGTTAAGCGTTGGGACGTTGCTGCCCGACATAACAACAGCCAAGGCAACGGGCTGGTCCTCAGGAGCCTTTATCGAAGCTGAACCTTATAAACACTTAAACTGTAAGATAACAAAGTCACGTTGGTATCACAAACACATTCCCCTTTCCTTTGGGCGAAACACCAGCCACAACCCACATTGTGTTGTCTATTAATCTGACCTATGCTGAGAATTTTCTGCTTGTTAATGGTTAACAAGTTGCCGACTCAGTCAGATATAAATGTGTCAAAACGGACTCGAGAGAAATGGGAGAAATCAGCAGCTGTGAGGAAAATTCAGGAGCAGCATGACTCACTTATCCACTGTGGAAACTCCAGCTACTGATAAATAATGTCTTACAACTGCAGATGTTTAAACTACACATTCAGTCACACTAAGCTGAACTGCAAACATAAATAGTTTTATGCTTAAGGCCATATTCTGTCCATATTCGTCTGAAATGTTTCAGAAGACTgaatattcatattttatttactgtacTGCTTCAATGCCAGATGAATGTGAAAACTTCTGATTTTACTCTCCTTTTGTAAAAGATGTAAGGTAAAATAGTCTCTAGTGTTACATATGGGAACAGCAGCACCAACAGGCAAACTGAAGAAGCTTATTCTTGtagtttaaataataaaatgcttTACGTGTAAGAAATGTGTCACTTTGTAGgccattttttttcaattatcgGTCTTTTTAAAAACACTCCTCTTCCATGTTGTCGCTCACTGTCAGCCTCCCTAACATTCACTGTCTGCATTATCACAGCAGCCTATTATTCA
>TU22821
tatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaattccggattatttacatggagtctggtgagtttggcgatagagattttggaaaaaggagtttactctttaacaaaaaggcctatgtctgtagggatcctttccataatgttgttagcgcttagaataataatctgagcctgtcatcGGCACAGTTCTTTAAGTGGACGCTAACTGACGCTGAACATTAGTAATCCTgtaggattacattgcagcccggttcgtggctgccggttacagcgttctcgctcaatactggaccaatttcaaagatttttcacattagtcacttagacaccgaTGCATGGGGAAAAtgtggtccaggttgaaaaataccgaaATGACCATTTAATGTGATGTACAgatattttttatacatagtTTAATAAATCCTTAAAGTCTTTGTAAAGATATAAGGAGGACAAAGGATGGAGAGAATGGAGGGTGGAGAAAATGTATTTCTCCAGAAGACTTGACAGCTGAGTTTAAAGGCCATTGAAAGATTTAAGAAAGGTGAGACGCAGATGGACATTGTTGTTAAGCGTTGGGACGTTGCTGCCCGACATAACAACAGCCAAGGCAACGGGCTGGTCCTCAGGAGCCTTTATCGAAGCTGAACCTTATAAACACTTAAACTGTAAGATAACAAAGTCACGTTGGTATCACAAACACATTCCCCTTTCCTTTGGGCGAAACACCAGCCACAACCCACATTGTGTTGTCTATTAATCTGACCTATGCTGAGAATTTTCTGCTTGTTAATGGTTAACAAGTTGCCGACTCAGTCAGATATAAATGTGTCAAAACGGACTCGAGAGAAATGGGAGAAATCAGCAGCTGTGAGGAAAATTCAGGAGCAGCATGACTCACTTATCCACTGTGGAAACTCCAGCTACTGATAAATAATGTCTTACAACTGCAGATGTTTAAACTACACATTCAGTCACACTAAGCTGAACTGCAAACATAAATAGTTTTATGCTTAAGGCCATATTCTGTCCATATTCGTCTGAAATGTTTCAGAAGACTgaatattcatattttatttactgtacTGCTTCAATGCCAGATGAATGTGAAAACTTCTGATTTTACTCTCCTTTTGTAAAAGATGTAAGGTAAAATAGTCTCTAGTGTTACATATGGGAACAGCAGCACCAACAGGCAAACTGAAGAAGCTTATTCTTGtagtttaaataataaaatgcttTACGTGTAAGAAATGTGTCACTTTGTAGgccattttttttcaattatcgGTCTTTTTAAAAACACTCCTCTTCCATGTTGTCGCTCACTGTCAGCCTCCCTAACATTCACTGTCTGCATTATCACAGCAGCCTATTATTCAAATGTCATTTAAGCTGTATAAATATATCACTGTAAATGTAAGAA

Function

GO: NA

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04744 Phototransduction
ko05010 Alzheimer disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU22820 True 1530 lncRNA 0.39 1 13396604 13398133
TU22821 False 1464 lncRNA 0.43 1 13396714 13398177

Neighbor

gene id symbol gene type direction distance location
zgc:154093 NA coding upstream 1045 13384200 ~ 13395559 (+)
bbc3 NA coding upstream 90775 13287879 ~ 13305829 (+)
zmp:0000000529 LOC102308420,LOC102195538,LOC105930185,LOC107092488,LOC101077945 coding upstream 297066 13088907 ~ 13099538 (+)
LOC120551276 LOC101468279,LOC102195252,LOC100709375 coding upstream 309232 13041188 ~ 13087372 (+)
trnak-uuu_4 NA coding upstream 393197 13003335 ~ 13003407 (+)
ercc2 ercc2 coding downstream 3468 13401645 ~ 13417034 (+)
ckmb ckm,LOC104935593,LOC107094873 coding downstream 60795 13458972 ~ 13464796 (+)
si:dkey-182i3.11 NA coding downstream 139014 13537191 ~ 13541026 (+)
blvrb blvrb coding downstream 301815 13699992 ~ 13708027 (+)
sertad3 NA coding downstream 312732 13710909 ~ 13716396 (+)
G16717 NA non-coding upstream 123217 13272974 ~ 13273387 (+)
G16641 NA non-coding upstream 157646 13237006 ~ 13238958 (+)
G16627 NA non-coding upstream 168580 13220436 ~ 13228024 (+)
G16628 NA non-coding upstream 220231 13175700 ~ 13176373 (+)
G16626 NA non-coding upstream 225076 13170494 ~ 13171528 (+)
G16759 NA non-coding downstream 19096 13417273 ~ 13418264 (+)
G16790 NA non-coding downstream 163914 13562091 ~ 13649236 (+)
G16792 NA non-coding downstream 169467 13567644 ~ 13591374 (+)
G16824 NA non-coding downstream 343364 13741541 ~ 13851363 (+)
G16842 NA non-coding downstream 507069 13905246 ~ 13905806 (+)
zc3h4 NA other upstream 36615 13340500 ~ 13359989 (+)
hif1al NA other upstream 259570 13107862 ~ 13137034 (+)
G16590 actn4,LOC102210441 other upstream 474135 12868830 ~ 12922469 (+)
LOC120554522 NA other upstream 765740 12630674 ~ 12630864 (+)
LOC120552034 LOC104947607 other upstream 940021 12442130 ~ 12456583 (+)
G16788 LOC103364096,LOC103373880 other downstream 158102 13556279 ~ 13562415 (+)
G16981 LOC104952532,LOC103377862,LOC106581065,LOC106612819 other downstream 1037870 14436047 ~ 14441693 (+)
LOC120547056 axl other downstream 1210421 14608598 ~ 14638950 (+)
rasgrp4 hnrnpul1,LOC104955748,LOC103368736,LOC102790390 other downstream 1338925 14737102 ~ 14760824 (+)
LOC120572787 NA other downstream 2038994 15437171 ~ 15467407 (+)

Expression


Co-expression Network