G16788 (LOC103364096,LOC103373880)


Basic Information

Item Value
gene id G16788
gene name LOC103364096,LOC103373880
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 13556279 ~ 13562415 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22889
GTAGTCCTAAAAGTCCTGAACTTGTTTAATGGCAAAGCAAacgcacacattcatacgggAGAAACTTGGGCTTCACGGTCTAGCTCAGAGGACACGCCGACAAGCGGAGAGGATTAAACCTCCAAAACGTGTGATTAAAGAACGACCCCCTGAGCCTCAGCCGCCCGCAAATCAATACAAGTACAAGTAACACCAATACAAGTACATCGAAGTAAGATGTTTCTCTTGCACCGGATTATTATCAATATTCTTTAGGAGGTATCAATTAGGGTATTCTGAGCTTTGTTTGAAGTGATTTCAATAGTGTAAGTAGTAGTAATACATAGTCCTTTACTACCCTCCAGTGGTCAAAAGAGGAACTAAATTACCACAAAACATCAAGTCAGACATGAAAACATAGGAATTACTTCCGTCAGttactttcaaaataaacacaaGTGACTAAACTATGAAACAGTCGTTCTTCAGATACCCAGTACGTATCAGGACTGGGCGTTTTGTCCTGACAGGAAACAACATTTACGAGCTTCCACAGGTGCGAATCCAACGAAATCACCGCTGCGTTGCCATTACTAATCGCCAGGTGCTCAGCTTCAGGGCGTAGAGAGCGTGTTCCCCAACAGCGTCCGGCGTTTCTCAGCACAGTTGTGTTTCTTGAGCAGCCTCGAGTCTGAAAATCCGAGTCCGCAGCTGCTGCAGGAGTACGgcctctctcctgtgtggacctGCATGTGAAACTTCACGTGTCCGAGCTGCCTGAACCTCACGCCGCAAACTTCGCACTCGTAGGGCTTCTCCCCCGTGTGCACCCGCAGGTGTCGGAGGTAGTTTGCGTAGAGCCTGAAGGCCTTGCCGCAATGCTCGCATTTATGCGGTTTCTCTCCAGTGTGCTGCAGTTGGTGGGACTTGAGAGCCTGATGGATGATGAACCTCTTCCCGCACACGTCGCAACCGAACGGCCGTTCCCCCGAGTGGATTCGCCGATGGTAGTCGAACGTCACTTTGTAGAAAAACGACCTGCCGCACGCGTCGCAGTTGTACTGCGTCTGGCCCGCGTGAATGAGCTCGTGTCTTCTCAGCACACTCGCGCTGTCGAAACTCTTGCGGCAGGTCTTGCAGCTGAACGGCGTCACGTCTACGATCGTCTTGTCCCGGCGATAGATAACTCGCCGGTTCCCCCGCTCGCGAGTTCGCCGTCGGACGACCTGCCCGTGCCTTTCGTCGTGGGTTGCTTTCTGGTGTCTCTGCAGATGGCAGTTGTAAAGAAAAGTCTTTCCGCACAGGTCGCACATGAACGACTTTGAGGCACCGTGAACGAGCATGTGGACTTTCAGCCGGTTTTCCTGAATGAAACTCTCCCCGCAGACTTTACATCTGAACGGCTTTTCGCCTGTGTGAATACGAATGTGTCTCTTCAGGTTTTGTTGCATGGTGAAGCCCGCTCCACACGTCTCGCACGTGAACATTTTCCCTCGGTGGACCGACTGGTGCGTCCTGAGCGACCTCCTCTTTATAAAAGCTTTGCCACACACCGTGCATTTGTAAGGATTTTCACCAGTGTGTGCGCTTTTATGGCACTGCAGCGTGAACGCGTACCGGAAACTCTCCCCGCACTCGGAGCATTTGTGCGGCTTTTCAACACTGTGCACGACCTGGTGAGCCTGCAGgttgtttttagttttgaagGCCTTCCCACAGGTGGAGCAGGTGAACGGCCTCGTGTCTGTGTGCGCGAGCTGGTGAGTCTTCAGGCACATTTTTGTCTTGAAAGTCTTCTCACAGAGCTGGCACTTGAAGGTAGCGTACTTCTTCTCCTCGTGCCGCAGCAGGTGGTACTCAAAAGTCGCCGTGTCCCTGAATTTTCGCGGGCACTGGTCGCAGGCGAAAGGCCTCTGGTCTTTGTGAGTGTTCATGTGCTTCGTCAGGTGAAACTGCCGGTTGAAGCTCTTGTTACACATATGACATACAAACAACTTCCCTTTCCTTGTGACTTctgcttcctgtgtgttttgGCGGTCTGCGTTTTTGGATTCTGCCGTGTTTGTTGTGGTACAATCATCTGCAGTGTCTTTTTTTACTGGCTGATGAGGACTCAGCTTCAGAGTTCACCTCCTTCGTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22889 True 2119 TUCP 0.51 2 13556279 13562415

Neighbor

gene id symbol gene type direction distance location
si:dkey-182i3.11 NA coding upstream 15253 13537191 ~ 13541026 (+)
ckmb ckm,LOC104935593,LOC107094873 coding upstream 91483 13458972 ~ 13464796 (+)
ercc2 ercc2 coding upstream 139245 13401645 ~ 13417034 (+)
zgc:154093 NA coding upstream 160720 13384200 ~ 13395559 (+)
bbc3 NA coding upstream 250450 13287879 ~ 13305829 (+)
blvrb blvrb coding downstream 137577 13699992 ~ 13708027 (+)
sertad3 NA coding downstream 148494 13710909 ~ 13716396 (+)
polr1g NA coding downstream 350217 13912632 ~ 13916358 (+)
rhbdd1 rhbdd1,LOC102789759 coding downstream 642015 14204430 ~ 14214243 (+)
galnt17 wbscr17 coding downstream 662990 14225405 ~ 14244738 (+)
G16759 NA non-coding upstream 138015 13417273 ~ 13418264 (+)
G16726 NA non-coding upstream 158102 13396604 ~ 13398177 (+)
G16717 NA non-coding upstream 282892 13272974 ~ 13273387 (+)
G16641 NA non-coding upstream 317321 13237006 ~ 13238958 (+)
G16627 NA non-coding upstream 328255 13220436 ~ 13228024 (+)
G16792 NA non-coding downstream 5229 13567644 ~ 13591374 (+)
G16824 NA non-coding downstream 179126 13741541 ~ 13851363 (+)
G16842 NA non-coding downstream 342831 13905246 ~ 13905806 (+)
G16845 NA non-coding downstream 344270 13906685 ~ 13910107 (+)
G16848 NA non-coding downstream 379534 13941949 ~ 13946439 (+)
zc3h4 NA other upstream 196290 13340500 ~ 13359989 (+)
hif1al NA other upstream 419245 13107862 ~ 13137034 (+)
G16590 actn4,LOC102210441 other upstream 633810 12868830 ~ 12922469 (+)
LOC120554522 NA other upstream 925415 12630674 ~ 12630864 (+)
LOC120552034 LOC104947607 other upstream 1099696 12442130 ~ 12456583 (+)
G16981 LOC104952532,LOC103377862,LOC106581065,LOC106612819 other downstream 873632 14436047 ~ 14441693 (+)
LOC120547056 axl other downstream 1046183 14608598 ~ 14638950 (+)
rasgrp4 hnrnpul1,LOC104955748,LOC103368736,LOC102790390 other downstream 1174687 14737102 ~ 14760824 (+)
LOC120572787 NA other downstream 1874756 15437171 ~ 15467407 (+)
G17201 NA other downstream 1903288 15465703 ~ 15542486 (+)

Expression


Co-expression Network