G16824


Basic Information

Item Value
gene id G16824
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 13741541 ~ 13851363 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22929
TTATTACGTCAGTTAACAAGGCGGCAACTGCTTCCTCATTTGAGACGGATCAGAAAAtattcatcttttctttttcagcaaTTTGTAGTTTGTACaaatgacagacacacacactcgatTGTTTCTGAATTTCATCACAAATGATTTGAGTTGACAATTGAAATATACAAGCAAAATAAACCTTCTGAGGTGAGAAAATGTAATAGAATGTcgaaataaaaaatgtacagtGCATCATTGACGTGGTCATAATGTAAACAATATtatcagaaaacaaaaacagtgtttTGATTTggcagctagattcagaagtTACGCCCATGGACTCAGCTGTGAGtgtgctgaaagagagaaaggcaAACAGGAAGCCAGAcggaaagacaaagaaaacagagaaacatCACATGCCAACATTTTAGTTTGAGTCTACTTCAGTGTCTCTGAGAAACCAGAGGCAGCGTTTCCTCCTGAATCCGCTTCGCTTCCGTTACCTCGTAAACATTGGCACTTTCATTGGTGTTCCTGTTGGCACTAACTGGAAGACAAACTTGTTTCTCTGAGGAACCAAAATTATTTCAAGATTCTTTCTCGTCATTGGCTTTTCTgtagcacaaacacacaatgaaaGCACATGCATCAAAAATGTAAGACTCATCCCATCTGGACGCATCGTCAGCATTCTGCCAGTAAAAATAATGCTTTACTTTGCTCCCCAGTGGGATAACATGATTTTCTGTTACTTCACTCATTCAGAAACACAAAGGGAGGGACATGAGCTTTGACGTTTGCATGAATCTAGCTGATGTTTACATCTGGAGAGATATGTTGGCATCCATAGATATACATTACAGGTTTTAACCACTTCTCCAAACTATACGAAAATACCCTCTAATGCGACCCATAGTAGCGCTTCATAAATTAGCACCCGTAGTAGTGGCAGGTGGTAGGTtacgagtaaaaaaaaaaaaaaaaataacccTTGGCAGTACTTGGCATTTCACTGGTTAAATGGAACATTACTTGCACTAAAGTGGTGATAAGCCAGGTTTACTGGAAGTCCATCTTCCTTTGGACCTTAGCAAACCGGGGAAACTCCGCTCAGCTGAGAGGCCGTCTGGCTGATTTCTTAGCTCAAGAGTTTCCATGTTCATGGTGTGAACAATTGTTTCAGCCGACTGGTGCAAAATGCTTTAGAGTTTAAATACTAAAATAAATGTGCAACTACAGCACCGCAATATGTGTTGAAGAGAAGGGTCCACactgatatgtttttttttgtaatactgTGGAATCTAACAAAAGTCTTTGACGTTTGAGTCCTGGGTGAGAGGAGTGCTGTACTCGGAGTTCCAGTCCCTCTCAAACACAGCCTGCAGCTGTGATTGGACGGTTGGCTCCGGGGACTGTGATGCAGTCTGGTTGACAACCAATGCTGAGCCAGCTGTGCTCACAAAGTAGTCCCCTGACCAGTTAGAT
>TU22930
GTCCATAGCCCTGAACAGTCACTTTATGAAATCATTGAACATACTGAATGTGTATCAGAGAGCACATGAAGATGAACTATAAACAGACTGGAACAGGTTTGATTTAAAGACATTTATTGAGAGTAATTTCTTTATAAAGAGGAAGGAGATAAGAACATGTTGACAATAACTGCCCCagagctttattttttttttatataagctCCCGGCTACTGGTAAACACGCTTCTTTGGACAGTTTCCATAACAACCACCTCCTCACTAATTGGTAGTTTCAAAAACTCCACACAGTGGAAATTAAAGCAAACTTTCAATCTATTGTGCGCACTGCTGACTTAagtattcaatttatttattttaaaaacggCTGTTTCTCATTTACAGCACAGGCACAGCACACCAGCTGGAACATTAATTATTCTGGCAAAATGAAATGATCAATTACGAAAAAAATCAAACTTTACTCCCTGAGATTAGCTGGGATAAAAACAACTTCCACTGAGGCGGATGTTGTAGAAAATGAATGCATTGTGATTGTCTTTTATAAACTAGAGAGTGATCAATCGATGGATCACGTAACATGTTGACTTTGGGagttagttgaaaaaaaaatcattatgcCTCATCATgaaactagtctcgctttgccagaccctcctccaaagcgctctgaaggagggtctggctagtccacatagcattcgaggatgggaggaaaacctgctctggtttattgacatttctttaaaccagtcagaATCGTCGCTAAACTCTgcacagagctgctgcaaaatagtcgtgcgagagaaaactcagattggacaaatagtctagctagctgcctggatttaccctgcagagatctgaggagcagttaaccatagtcctcagaaatccaccaaatttaaaattccaacacaaagaaagtggaaggaaacagaaaatacatgcatccggcagaatttcctgcagcaccggagcaatcccagaagtggaacgtcgaggatatagaccaTCATGAAACAGACCTGACTGAAAAGCTGAAACAGTGCCCCCTTCTGCTGCTGGCACTACATGTCGGAAAACACAAGTTGAAACGTACAAGTTTGTTAAGAGAgagttttttaaaaagcaacaactGCCTGTTCATGGGTTGTCAATGCCGGCAACATGTCGCAGAGCATTCTGATCCGATGTTACTAAAGAGTAGTTTAAATGTGATCTGACCTACAGTATAACCCACACATGTAGTTTGAATCCCGGGCCAGCTTTGATAGTAAACAGCAAAGAGAGGCAAAtggagtaaaaagta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22929 True 1476 lncRNA 0.41 2 13741541 13827646
TU22930 False 1311 lncRNA 0.40 2 13825819 13851363

Neighbor

gene id symbol gene type direction distance location
sertad3 NA coding upstream 25145 13710909 ~ 13716396 (+)
blvrb blvrb coding upstream 33514 13699992 ~ 13708027 (+)
si:dkey-182i3.11 NA coding upstream 200515 13537191 ~ 13541026 (+)
ckmb ckm,LOC104935593,LOC107094873 coding upstream 276745 13458972 ~ 13464796 (+)
ercc2 ercc2 coding upstream 324507 13401645 ~ 13417034 (+)
polr1g NA coding downstream 61269 13912632 ~ 13916358 (+)
rhbdd1 rhbdd1,LOC102789759 coding downstream 353067 14204430 ~ 14214243 (+)
galnt17 wbscr17 coding downstream 374042 14225405 ~ 14244738 (+)
sbds sbds,LOC102210364 coding downstream 564987 14416350 ~ 14419971 (+)
LOC120553742 LOC104934287,LOC105933093,LOC104963023,LOC103373152 coding downstream 612289 14463652 ~ 14464390 (+)
G16790 NA non-coding upstream 92305 13562091 ~ 13649236 (+)
G16792 NA non-coding upstream 150167 13567644 ~ 13591374 (+)
G16759 NA non-coding upstream 323277 13417273 ~ 13418264 (+)
G16726 NA non-coding upstream 343364 13396604 ~ 13398177 (+)
G16717 NA non-coding upstream 468154 13272974 ~ 13273387 (+)
G16842 NA non-coding downstream 53883 13905246 ~ 13905806 (+)
G16845 NA non-coding downstream 55322 13906685 ~ 13910107 (+)
G16848 NA non-coding downstream 90586 13941949 ~ 13946439 (+)
G16849 NA non-coding downstream 97457 13948820 ~ 13966882 (+)
G16907 NA non-coding downstream 226255 14077618 ~ 14081865 (+)
G16788 LOC103364096,LOC103373880 other upstream 179126 13556279 ~ 13562415 (+)
zc3h4 NA other upstream 381552 13340500 ~ 13359989 (+)
hif1al NA other upstream 604507 13107862 ~ 13137034 (+)
G16590 actn4,LOC102210441 other upstream 819072 12868830 ~ 12922469 (+)
LOC120554522 NA other upstream 1110677 12630674 ~ 12630864 (+)
G16981 LOC104952532,LOC103377862,LOC106581065,LOC106612819 other downstream 584684 14436047 ~ 14441693 (+)
LOC120547056 axl other downstream 757235 14608598 ~ 14638950 (+)
rasgrp4 hnrnpul1,LOC104955748,LOC103368736,LOC102790390 other downstream 885739 14737102 ~ 14760824 (+)
LOC120572787 NA other downstream 1585808 15437171 ~ 15467407 (+)
G17201 NA other downstream 1614340 15465703 ~ 15542486 (+)

Expression


Co-expression Network