G16845


Basic Information

Item Value
gene id G16845
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 13906685 ~ 13910107 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU22958
CTCTTATtgaacagttttattttatacttgaattaaatgtatttgaaagctggcaaaagcttggcactttgcagtttttagttgcaaaagtttttattttcgTATGAAGACAAAGTAATAtaaaactacatttaatttgttgcatttcttttctttcaaattgtatgtctactacAGTCCCacgggaaaagtaactacatttacatactgtgaatcgtttttgtTTTAATCAAGAACGtcttttgaatcgaatcttgagcctaaaaatcgatattgaatcgaatcgtgacgtTTTCTGAATCGTGCGCCCCTACGCTCCACTAACATGAATGGAACAATGGATGTGAACGGAAGACTGTGAGGTTCTTTGTTTAAATTAAGATAAGATTAATTTCATCATCTGCAAacaaaaatatactttttaaaTACAGTTTCCACTCCATAAAAGTGTCAGGTGATAAGAAGTCTCCTTTTAGGAGAAACAAATTCATAAACAATATTAAACCGTTTTAGGATTACAGAAGAACGTTTCCGCTTTTAGGTGGATTCTCCcttcaaaaaaactaaaaggtttAAGAAATGATACATACAGCATCGTTTTTAATTACATATTCCAAACTGTTGCATATGCTATGACTAAGGATTGCACATACTATTATAGatctatacagtatataacattTAACATTCGAGTATAAAATATAGTCCTAGGCCTATCGATAGATATATCTTTTCATGTACATTCGGGGTAAAGCGTAGGCTGGGCTGGATCTTGTATGAAAGCAACATTTAAATACAGTTAAACAAAGAGTCTCTGCGGCTGGTCTATGCTTTGACACAACAACTGGTTGTTTGTAGACACTCTCTGTTCTCGGAGTCAAAGTCAACTTTACTTTGAgcagacgaaaaaaaaaaaatgcacagacacacagagaaatgtCACTACTGGCATTCTGTCCACAACTCATGTTGGTTTGCATGTTTAGTTGTTTTAgaggttttttatatatatatatatatatatatatatatatatatatatatatattttttttaaacaatctgATTGCGCATCAGGACACAGATACAGtcaaaacaatacaaataacTTGAAATTTAAGGTACACTTTGTCACGATAACTGTCAGTGTCGTGTCAGTTGTTAATGTTAATCGTAGTTGTAGAAGCACGAAGATTTTATTAGACCAAGCACTGGCAGAGAAAATGGCATGGCGAGTTCCAACTTGTTTCAACTCCGAACAGCTTGTGTTTTTCTGCCAACAGTCTGATATCTGACCTCCTGCTGCAAGCTGCCGGCCAAAGTTTGTTCATCAAACAGGAAAGATACAGGACAACCGTGGCCACTGTTTTTagcatttcaacatttgtgttggATTTGTCAAAACAAGCTTTCTGTGCTTTCCCGTGCAAACACAGTATTGAGTGTATTGTTGAAGTAAACACTGGAGCGTGGCTACTTTCTGTGAGTTTGAGAAGGATCATTTGAAACTAAAAACATCCCTATATTAGTTCTGCTAACAGGCTACCATtagcaaataaaaccaaataaataaaatatgaatacacTGGTGGCCAGATAAGAGAAATGGAGACATTTCAGTAGTCCTGTTGGCACTGGTTGTTTCATAAGGTGCATATTCAAGTGTGACAGTTGTTTATGCGATTACGAAATCTTTCAAAAGATTGCAATGGTGGTGTAGATTTTTGTTTGTAGAAAAGTGAGAAAAGactggtgtagtctacgtgtgGCTTCAGCCCGTTTGTGTCCAGCTGCTAACAGTAGCTAGCTGGCAGTGCTAATGTGGGCATGATCAGGGCTGCGTTtcattagtttattttttttaacatgcccTCCTTCAATTCGCTCAGCCCTTGGTCGTCATAGCATATGTCGCAAGGCGGCCACTTGGAGAGCAGAGGGAAAGTGGGCGGGGCAGGGGCAGTGAAATGGAACACACCTGCCCCCGTTAACTCTCAGCCCAAACTATACGGATCGACCGCCAGTTGTAGGCTTAGCGCTACTgcttcaagtgtgttttattacccATCTTATTTTCTATTAATTATGGCTTTATATCCCCGTTTTATGTTCATTCCATGTCTGCTTATGTCATGCAATTTCCTTATTGTACAGCAGGCCTATTTCTTGTACGAAAGGCGCAatacaaatattatttataaaaaagtatTATTACTGCTTTTCACACATCATAAATACCTGCAGATTCATTTCAATGAGGCTTGGTAATCAGCTGCACGAGTTTCATATTTAGAAAAGTGTGATCTGTATCATTTACCATTTTAATGCTTACATCTCGCAAAAACAGAGTTTCTTCCACGCATTTACAGATAAGGTTGGAATTGAAGAAATCACACATACAACTATcttgtaaataaaatgtataaagtaAATTGACATGTTTCAGTAAAATATCGAGCTAACAATGAGGAAACTAAAAagttgaaatgtattttttcatcTTCTCCTTCTTTGGTGGTCAGCAACAGGAGTTATAACGGTTGTACATTACTGCCACCTAACCATCAATCTATTTTTTTTGCCCCAAATGCATAACTGTAATGACTTGTGGGTGATGTCCACCTCTGGAGTGACCATCGTTATTCACTCGCTCGATCTCACCAAGCCCCCTCCTGTTTTTTTAGACGATTGGAGCGACACTTAAGATGGCGGTGGGGATTACCCCCCCCCCGAGAGCAAGTGCTTAGGGGAAGTGAACGAGAGCATGTTGAACCACTTTTGAAACGCAGCCCAGTTGTTTCTACTGGCACAACTACTACTAACACTACAAAAGTAGCCACTGTTCAGCTGTTGATTGGCCCTGAATATCTGATTCCAACAGTACATCAAAAGGCAATTTTAGGTCTGATAATGTTGATAGAATTGGGTGGTGTTAGTAGTTGGAGTCAAGACCTGTGCAATGGAGGTTTTCCGAACTGTGTTGCTTCTCTTCTGGATCTCTCAGAGCTCCATTGCAGACGTCTCTTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22958 True 3029 lncRNA 0.38 2 13906685 13910107

Neighbor

gene id symbol gene type direction distance location
sertad3 NA coding upstream 190289 13710909 ~ 13716396 (+)
blvrb blvrb coding upstream 198658 13699992 ~ 13708027 (+)
si:dkey-182i3.11 NA coding upstream 365659 13537191 ~ 13541026 (+)
ckmb ckm,LOC104935593,LOC107094873 coding upstream 441889 13458972 ~ 13464796 (+)
ercc2 ercc2 coding upstream 489651 13401645 ~ 13417034 (+)
polr1g NA coding downstream 2525 13912632 ~ 13916358 (+)
rhbdd1 rhbdd1,LOC102789759 coding downstream 294323 14204430 ~ 14214243 (+)
galnt17 wbscr17 coding downstream 315298 14225405 ~ 14244738 (+)
sbds sbds,LOC102210364 coding downstream 506243 14416350 ~ 14419971 (+)
LOC120553742 LOC104934287,LOC105933093,LOC104963023,LOC103373152 coding downstream 553545 14463652 ~ 14464390 (+)
G16842 NA non-coding upstream 879 13905246 ~ 13905806 (+)
G16824 NA non-coding upstream 55322 13741541 ~ 13851363 (+)
G16790 NA non-coding upstream 257449 13562091 ~ 13649236 (+)
G16792 NA non-coding upstream 315311 13567644 ~ 13591374 (+)
G16759 NA non-coding upstream 488421 13417273 ~ 13418264 (+)
G16848 NA non-coding downstream 31842 13941949 ~ 13946439 (+)
G16849 NA non-coding downstream 38713 13948820 ~ 13966882 (+)
G16907 NA non-coding downstream 167511 14077618 ~ 14081865 (+)
G16954 NA non-coding downstream 432509 14342616 ~ 14344860 (+)
G16975 NA non-coding downstream 510351 14420458 ~ 14420755 (+)
G16788 LOC103364096,LOC103373880 other upstream 344270 13556279 ~ 13562415 (+)
zc3h4 NA other upstream 546696 13340500 ~ 13359989 (+)
hif1al NA other upstream 769651 13107862 ~ 13137034 (+)
G16590 actn4,LOC102210441 other upstream 984216 12868830 ~ 12922469 (+)
LOC120554522 NA other upstream 1275821 12630674 ~ 12630864 (+)
G16981 LOC104952532,LOC103377862,LOC106581065,LOC106612819 other downstream 525940 14436047 ~ 14441693 (+)
LOC120547056 axl other downstream 698491 14608598 ~ 14638950 (+)
rasgrp4 hnrnpul1,LOC104955748,LOC103368736,LOC102790390 other downstream 826995 14737102 ~ 14760824 (+)
LOC120572787 NA other downstream 1527064 15437171 ~ 15467407 (+)
G17201 NA other downstream 1555596 15465703 ~ 15542486 (+)

Expression


Co-expression Network