G16882


Basic Information

Item Value
gene id G16882
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 13767899 ~ 13770080 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU23061
atatacagtataggttATCCTTATCTTATGATTCATTCAGTTTGTATTTAAACACTTAAACACCTGCTGACCAGCTCCATTATGGGACGTGAAGGACTCATATTAAGGCCTAAAGTCGGTATGTGTTTGCCTTTGCAGCATTGATTTTGgcctctctttttttattcgTCTTTTTCGCAAGTTCCCCAAACTTTAAAGTGCAATATTAAACCACtggAGTACTCCTTTGAATGACACAGTGAATAATTGCACAAATCTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23061 True 261 lncRNA 0.37 2 13767899 13770080

Neighbor

gene id symbol gene type direction distance location
kcnk6 kcnk6,LOC104944303 coding downstream 30506 13719887 ~ 13737393 (-)
LOC120574254 sptbn4 coding downstream 73863 13576093 ~ 13694036 (-)
LOC120574245 NA coding downstream 193395 13568844 ~ 13574504 (-)
LOC120547251 NA coding downstream 200345 13556280 ~ 13567554 (-)
LOC120547238 LOC102785257,LOC103373880,LOC104952507,LOC105417105 coding downstream 212030 13541742 ~ 13555869 (-)
pld3 pld3,LOC103364087 coding upstream 55836 13825916 ~ 13838806 (-)
foxa3 LOC103364086 coding upstream 124954 13895034 ~ 13899904 (-)
irf2bp1 LOC103377881,LOC103364085,LOC104964332 coding upstream 138049 13908129 ~ 13912626 (-)
nova2 LOC104927796,LOC101481231,LOC103377877,LOC107097063,LOC103138289,LOC106535085,LOC107379798,LOC100701682,LOC102216529 coding upstream 189690 13959770 ~ 14044832 (-)
eml2 eml2 coding upstream 396033 14166113 ~ 14203307 (-)
G16751 NA non-coding downstream 369579 13396210 ~ 13398320 (-)
G16737 NA non-coding downstream 407680 13318063 ~ 13360219 (-)
G16716 NA non-coding downstream 512019 13254343 ~ 13255880 (-)
G16709 NA non-coding downstream 602305 13164817 ~ 13165594 (-)
G16688 NA non-coding downstream 630831 13015625 ~ 13137068 (-)
G16888 NA non-coding upstream 135124 13905204 ~ 13905788 (-)
G16889 NA non-coding upstream 135824 13905904 ~ 13908030 (-)
G16898 NA non-coding upstream 158263 13928343 ~ 13928714 (-)
G16894 NA non-coding upstream 180981 13951061 ~ 14016471 (-)
G16933 NA non-coding upstream 368646 14138726 ~ 14140433 (-)
si:ch211-14c7.2 LOC103364094,LOC102787713,LOC101474093,LOC102298349,LOC106947863,LOC103138296,LOC106921473 other downstream 5531 13662907 ~ 13762368 (-)
G16871 blvrb other downstream 59859 13701643 ~ 13708040 (-)
sae1 sae1 other downstream 432746 13313443 ~ 13335153 (-)
ccdc9 ccdc9 other downstream 506050 13224914 ~ 13261849 (-)
slc8a2b LOC102291167 other downstream 912172 12664199 ~ 12855727 (-)
gpr4 gpr4,LOC103368504,LOC104964910 other upstream 308497 14078577 ~ 14086764 (-)
caln1 caln1,LOC103372560,LOC107097061 other upstream 477848 14247928 ~ 14322833 (-)
si:ch1073-145m9.1 LOC104930674,LOC104957430,LOC102079100,LOC108239365,LOC105418711 other upstream 1548760 15318840 ~ 15325799 (-)
lyrm9 lyrm9 other upstream 1876561 15646641 ~ 15651047 (-)
G17287 NA other upstream 1925474 15695554 ~ 15719041 (-)

Expression


Co-expression Network