gpr4 (gpr4,LOC103368504,LOC104964910)


Basic Information

Item Value
gene id gpr4
gene name gpr4,LOC103368504,LOC104964910
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 14078577 ~ 14086764 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU23133
GGTAAGCGGGTGGCCTCTTGGCTCCATAGTGGTGAAGCTCTGTAAAGCCATTCTTGTGTTTTAGTGCAAGCATCCCCAAGGAGTTTTGTGTGTCATCGGGACCttgagacacacccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatacacacacacacattgatgtTCAGCCTCTCCTTTTTAGAGTAAAACCTGGCAGACCTCTTATCTCTAAAAGATTGATGAGGCTCTGTACAGGCGCAGGAGGCCTGGCATAGCGTCGATAAGGCAGATTTTATTTCGCTACATTTTATCCCTCGctccttcctttcttctcttttcctccatgTTGAGGGACACAAGGGCTGGCTATGAAGCGTGAATGAGGATTACGACATGGCAAGGCCCCTGGGCGAGAAGGATAgtgttttaagaaaaaaggaAGCATGAAATGCCCCGGACATGACAGTTCTCTTGTCTTCTGTTGCTCACGTCAGACAGCCGTGTGGTAGCCGAGCAGAACGCCAGAGTCGGcatgtcactgtcaaactgCTGGAGCTGGAATATAGTGAAACTACAGAGGGACACTCAGAGCTGAGAggagctgaacacacacacatcccacacctgcacacactcacaaacacactcagaGCATTTCACACGTGACAATGTGCAACATCACCTTCTGTGATGTGGACAGTAAGGTGGACCAGTTCTTCCAGCCCACGCTCTACATCATAGTCATTGTTCTGGGGCTGCCCACCAACTGCATGGCATTGTGGGCAGCCTACATGCAGGTACGGCAACGCAATGAGCTCGGCATCTACCTGATCAACCTGTCAGTGGCTGACCTCCTCTACATTACCACTCTTCCTCTGTGGATCGACTACTTCCTGCAGCACGATGACTGGATCCACGGTCAGGAGAGCTGCAAGCTATTTGGCTTCATCTTCTACACCAACATCTACGTCAGCATCGCCTTCCTCTGCTGTATATCACTGGACAGCTATCCTGGTCAGCATCATGGTGTGGACAATTGAGATCGTAGCCAACTCTGCTCCTCTCTTCCACGATGAGCTCTTCCAGGATCGATTCAACCACACTTTCTGCTTTGAGAAGTATCCCATGCAGGACTGGGTGGCAGGGATGAACCTCTACAGGACATTTCTGGGCTTTCTCGCTCCATGGACAGCCATGCTTGTCGCCTACCGTGGGATCCTGGTAGCAGTGCGCTGCAACGTCTCAACAGAGCGTCAGGAAAAGGCCAAAATTCAACGTCTGGCGTTGAGTCTGATCCTGATCGTTTTGCTCTGCTTTGGACCGTACCACATCCTCCTGCTGGTGCGGAGTGTCATGTTTCTAAAGAAGCCATGTGACTGCAGCTCAGAGGAGAGCTTGTTTGCAGCGTACCATGTATCATTGGCGCTGACCAGCCTCAACTGCGTTGCCGACCCCATTTTGTACTGTTTTGTCAACGAGGGGGCGAGGCACGACGTTGGCCGAGCTCTCTCAGCTTTACTTTCTGCAGCTT
>XM_039787130.1
GGGTGGCCTCTTGGCTCCATAGTGGTGAAGCTCTGTAAAGCCATTCTTGTGTTTTAGTGCAAGCATCCCCAAGGAGTTTTGTGTGTCATCGGGACCttgagacacacccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatacacacacacacattgatgtTCAGCCTCTCCTTTTTAGAGTAAAACCTGGCAGACCTCTTATCTCTAAAAGATTGATGAGGCTCTGTACAGGCGCAGGAGGCCTGGCATAGCGTCGATAAGGCAGATTTTATTTCGCTACATTTTATCCCTCGctccttcctttcttctcttttcctccatgTTGAGGGACACAAGGGCTGGCTATGAAGCGTGAATGAGGATTACGACATGGCAAGGCCCCTGGGCGAGAAGGATAgtgttttaagaaaaaaggaAGCATGAAATGCCCCGGACATGACAGTTCTCTTGTCTTCTGTTGCTCACGTCAGACAGCCGTGTGGTAGCCGAGCAGAACGCCAGAGTCGGcatgtcactgtcaaactgCTGGAGCTGGAATATAGTGAAACTACAGAGGGACACTCAGAGCTGAGAggagctgaacacacacacatcccacacctgcacacactcacaaacacactcagaGCATTTCACACGTGACAATGTGCAACATCACCTTCTGTGATGTGGACAGTAAGGTGGACCAGTTCTTCCAGCCCACGCTCTACATCATAGTCATTGTTCTGGGGCTGCCCACCAACTGCATGGCATTGTGGGCAGCCTACATGCAGGTACGGCAACGCAATGAGCTCGGCATCTACCTGATCAACCTGTCAGTGGCTGACCTCCTCTACATTACCACTCTTCCTCTGTGGATCGACTACTTCCTGCAGCACGATGACTGGATCCACGGTCAGGAGAGCTGCAAGCTATTTGGCTTCATCTTCTACACCAACATCTACGTCAGCATCGCCTTCCTCTGCTGTATATCACTGGACAGGTACCTGGCCGTAGCATATCCACTGCGCTTTGGCAAGGTTCGACGAATCAAAACAGCTATCCTGGTCAGCATCATGGTGTGGACAATTGAGATCGTAGCCAACTCTGCTCCTCTCTTCCACGATGAGCTCTTCCAGGATCGATTCAACCACACTTTCTGCTTTGAGAAGTATCCCATGCAGGACTGGGTGGCAGGGATGAACCTCTACAGGACATTTCTGGGCTTTCTCGCTCCATGGACAGCCATGCTTGTCGCCTACCGTGGGATCCTGGTAGCAGTGCGCTGCAACGTCTCAACAGAGCGTCAGGAAAAGGCCAAAATTCAACGTCTGGCGTTGAGTCTGATCCTGATCGTTTTGCTCTGCTTTGGACCGTACCACATCCTCCTGCTGGTGCGGAGTGTCATGTTTCTAAAGAAGCCATGTGACTGCAGCTCAGAGGAGAGCTTGTTTGCAGCGTACCATGTATCATTGGCGCTGACCAGCCTCAACTGCGTTGCCGACCCCATTTTGTACTGTTTTGTCAACGAGGGGGCGAGGCACGACGTTGGCCGAGCTCTCTCAGCTTTACTTTCTGCAGCTTCACAgcgcctccccccccccccccccccccacacgcccacacccccccgccccccccccccccccccgccggcGGGGAGATTTTGCACGCTGGTGAGAGACAAGACAAACAGCTACAAGACAGAACTGGTGGCTCTGAAGGAGGAGTGTCTACAGATGACCATCCTCAGTGTTAGGAAGTGACTTCAACCGGgaatatacagtactgtaggAAGTCCAAACTGCTCAGCACAGTGGATGGAGGAAGCTCCTAACACTGACAGGGTCTGATGTCTTCTGGCCTGACAGGCTGGAATCACATGCATTTATGAGGCTGTAGAATTTTTAGGTGAAAGCTTCCACTAAATGGCACATTTACTAGCCAGAATGGGAATGAGATTCATGAAAGATATATTGCCTCTAGCCATGGTAGCAGCCCCTGACATTGAAATGCTTACACACCAGAAAACAAAATTGTCGGGTGAATGAACATTTGAGAGTCTATTTTTGCTATTGTTAAAGATCCTTACCATTAGTGGGGCAATGAGGGTGGCATTGAGGACAAGTCATGTTGAAAATCAAAAGGGTTTATCCTTTGTTCGGCGACCACAGACAGCTTGTCAGGCTCAGTCCTTTGTTGCTGATTTGTTACAACGTCCATTACTTCAAGCTGTAGTTTGTCAGACCTCTGCACAGCTGCACTGCATGCTAATGTTAACATGCTATATTATCATCAATCAGGATTCAGCAATAAGCTTCAGAGGTATTCTCGTGAAGTGTTCAACCGGAGGAAATGTTGACCTGCAGCTGGCGCTGTATGAaatgtcaggggatcaccaaagtcctCAGGATTCAGCCACGGTGGACCAccaatgtctgtaccaaatttaattccaatccatccagtagattttgagatatttcagtctggaccaaaacAGATCAACAGACCAGCTGACATCCCTGCAGTCATCTCACTGGTGCAGCTAACAAGGATCTTATCAATCACCCACTGTGCCAGGAGTCATTGACAAGGCCTCGGAAGACATTCTTGAATATTTAAGTGGAAAAATTTAAACACACTACATTCTGCATGGCTGAATATTGTTAATGGTCTGAGAGGAGGCACCTTTGACTTCAGACTGCATGAATGCACCACTTTGGAATATGGAAGAAGAGCAGGAGGGTAATAAAAAAGATTGTAGGTTAATGGTCAATAAAATTATTTGAATGCTTGTTGGAAACGTTTTAactgtttattagttttttttaagaaaataatgAAGCCATATAAAGTACCTCAGCTCGTAAACTGTGATAGCAAGAAGGCTGAAAGTAGAAGTGTCATGCAAGCaatgttttttctctttcatttttaACACAGACAGGACGACAATTAAGAACTCCTAAACCAAAGCCCGCATTCAGCTCAGAAGAAAGTCAAATAAATCAGTTATACTTAAACTACATTAtgttcagcctgttctcatgaaccatacgtTCGAAAATCTATGAAAAaattaagcactgtaattcgtatgacttccatgttgttgttttttgctgtGTGCACCAATTGATTGgtgctgtataagaacgcggCTGGCGTTACAAGACTTTCAAGCCAAGGAGCGGAGTTCGCTTCccagggaaaacaaaagactttcagccaggaaatgcgtgttccttgggagtgttttaattcaAACCACAATcgttttcctaaacttaactagtcgtttcggtgcctaaacttaactttcatCGTCGCGTAACACTTactttttgttgcctaaacttaaccgcaATCTCTGCCgaaacgaccggcagctcgcggggTTCTGTACCCAGtacacagtcacctattctcgggtaactgaaccaccaactaccgctgacctgacggagaaCTAGCTACGACCAGTAGCTCCctgtgctctgtacccggcacacagtcacctattctcgggtaactgaaccaccaacaaTGATCGGCAGCTCgcagtgctctgtacccggcacACGGTCACCTATTCTTATGTAACTGAACCACTAACttccgctgacctgacggagccggtgtcgcagagctctgtagcggctaaacacatctaccaACTGCTGCTGATACGATAAGCTgggacggaggtctgtagccgcgtcacaaagctctgtagcggccCAAACAattagcaactgccgctcggcgtcacagacctctgtagcagatgtcacgtgaccagctggcggtctcctagttttcgtatgatatcatacgttTTAGTGTGCATAACGTTTCGTGCGATAACTATACGAACgcgttcatgagaatgtgttgttatGTTAAGAGCACTGTGGGGCAGAAAAACAGCCTTTACTGAAACTGTGTTGCCAGAGAACCATCTCTCAACCTCCATGAATCCAAACTACATGCTTAGGCTTTGGTAAAGGCAATCCACAGTTGACCTCATACTGTTTACATTCCTATTTCAGACAGATGCCTTCTAACGTGAACTGTCCCAAAATTCCTAATAATATACAGAACattgtctttttcatttttgagtcatttttctcatcacacaaaatgtttttcagatcTTCGTTTTCCCTAAAGGAAAGATTTATACATTCGTTCTTCATTCAAGTAACACTCCAGGCTGCTAAAAGCTTGTCATATTAGGGAAACAAATTAAGAGAAATTTTTTCTGTAATGTCAAAAGTCTGATAAGAAAATTaagaaatacttaaaaaaaacatctccagtGGTCAGCAGAACTGTGGCAGCAGCCATTGAAGGTCTGTGGCAGCATTCAAAACAGCAGTGTACcactcattctttttttatgatttatttaaaaatcaacatttaaataaaaggtaCAATAAGCATGTCCCTCCTTTTGTGTGTGAAGCTGATTGTTGTTAAGTGATACTGACAATTTGTGGTCCGCCAACACTGGATTAGCTGCTATATTTTTCCATAGTATATTAACTACTTTCTGAAGTTCTTATGTACAGTGAGCACTGTCAgggccagaaaaaaaaaagaaatcctgaAAAAATGTTCATGTGCAGTGCATTTACAACGATTTGACATTAAATTGATGTTCCTTTTCCTATAGTTGACAGCTTATTTTTACAGTAAATCCAACACAAAGTGCCCAAACATAGCATTTTACAACAGTTGGGATGCCAAAACTTAATGGCTGCCTCTACAACAGAGCGTTGAATACTGTACATAAAGAAAGTATAGGTGTCACTGAAGAGTCAGACTGGTGCTAcctttacacgtggccggctattttcataaacggacatttcaacctctccgttttcaaaaataacatcgtgcacagctgtcagttttcagaaaagtgttcgtttacacgtacccgtgtatatat

Function

symbol description
gpr4 Enables G protein-coupled receptor activity. Acts upstream of or within G protein-coupled receptor signaling pathway and response to acidic pH. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human GPR4 (G protein-coupled receptor 4).

NR:

description
PREDICTED: G-protein coupled receptor 4-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04312 GPR4; G protein-coupled receptor 4

RNA

RNA id representative length rna type GC content exon number start site end site
TU23133 False 1571 TUCP 0.51 3 14081963 14086764
XM_039787130.1 True 5005 mRNA 0.45 4 14078577 14086757

Neighbor

gene id symbol gene type direction distance location
nova2 LOC104927796,LOC101481231,LOC103377877,LOC107097063,LOC103138289,LOC106535085,LOC107379798,LOC100701682,LOC102216529 coding downstream 33745 13959770 ~ 14044832 (-)
irf2bp1 LOC103377881,LOC103364085,LOC104964332 coding downstream 165951 13908129 ~ 13912626 (-)
foxa3 LOC103364086 coding downstream 178673 13895034 ~ 13899904 (-)
pld3 pld3,LOC103364087 coding downstream 239771 13825916 ~ 13838806 (-)
prx NA coding downstream 266808 13765544 ~ 13811769 (-)
eml2 eml2 coding upstream 79349 14166113 ~ 14203307 (-)
LOC120544580 hnrnpab coding upstream 198959 14285723 ~ 14286550 (-)
tyw1 LOC101477816,LOC102209872 coding upstream 257355 14344119 ~ 14415378 (-)
LOC120553667 LOC103373161,LOC102210664,LOC102799935,LOC102292497,LOC101477532,LOC100695891,LOC101161321 coding upstream 334241 14421005 ~ 14422454 (-)
cldnj LOC103373160,LOC104952535 coding upstream 335791 14422555 ~ 14498261 (-)
G16894 NA non-coding downstream 62106 13951061 ~ 14016471 (-)
G16898 NA non-coding downstream 149863 13928343 ~ 13928714 (-)
G16889 NA non-coding downstream 170547 13905904 ~ 13908030 (-)
G16888 NA non-coding downstream 172789 13905204 ~ 13905788 (-)
G16882 NA non-coding downstream 308497 13767899 ~ 13770080 (-)
G16933 NA non-coding upstream 51962 14138726 ~ 14140433 (-)
G16942 NA non-coding upstream 127084 14213848 ~ 14215714 (-)
LOC120551036 NA non-coding upstream 434002 14520766 ~ 14523356 (-)
G17037 NA non-coding upstream 462485 14549249 ~ 14549494 (-)
G17104 NA non-coding upstream 551147 14637911 ~ 14638943 (-)
G16880 NA other downstream 255520 13755949 ~ 13823057 (-)
si:ch211-14c7.2 LOC103364094,LOC102787713,LOC101474093,LOC102298349,LOC106947863,LOC103138296,LOC106921473 other downstream 316209 13662907 ~ 13762368 (-)
G16871 blvrb other downstream 370537 13701643 ~ 13708040 (-)
sae1 sae1 other downstream 743424 13313443 ~ 13335153 (-)
ccdc9 ccdc9 other downstream 816728 13224914 ~ 13261849 (-)
caln1 caln1,LOC103372560,LOC107097061 other upstream 161164 14247928 ~ 14322833 (-)
si:ch1073-145m9.1 LOC104930674,LOC104957430,LOC102079100,LOC108239365,LOC105418711 other upstream 1232076 15318840 ~ 15325799 (-)
lyrm9 lyrm9 other upstream 1559877 15646641 ~ 15651047 (-)
G17287 NA other upstream 1608790 15695554 ~ 15719041 (-)
sdhdb sdhd other upstream 1959244 16046008 ~ 16060408 (-)

Expression


Co-expression Network