lyrm9 (lyrm9)


Basic Information

Item Value
gene id lyrm9
gene name lyrm9
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 15646641 ~ 15651047 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU23562
TTGCGGCACATTGGTGTTGTTTACTGGGCTAGTGACTCCAAGGAGGTTTTTACGATTCTGAGCGCCTGCTGACAGCCTTCCCTACAGTTGACAGAGATACTCAGTTTAACCGAAGGAGGAAGGCATGCTGCCTTTAGTTGGAGCTGAGTTGACACCAGTGCAGCTCTATCGACATCTCCTCAGATGTTGCAGGCAGTTACCAACCCCAGCAATGCAGAAACATTATCGACATGCCATAAGACAGGGTTACATCAGTCACTCCGATGAAGACGACCAAGAGAGGATACAAATGATAATCCAAAGAGCTATTGCTGATGCAGACTGGATTCTTGATAAATATACAAAGAAGAAGTGAAGTTCATAATCCATGAATACGTCCTCGGGTGTAGCATTTTGCAGAGCTGCACCTGACATGAATCATAGTGGTGGATGCACCGTTTCTATGTCTGACTTTTGAGTGCCCATTGTGTTATTTGTCCTCGTTATTGTGGGGATGTGAACAGTCATGGTCAAGTCAGCTTTATTGTCAGATGTGCTATACATGAAATTTCAGTCCTCTCGGACCCCCGGTGCAAAGCAAACATGATGAAAGGAAGGCCTCACGAGTCATCGACTCTTATACTATACTGTATGAAATGACTGCTCAATTGAATAT
>TU23563
TTGCGGCACATTGGTGTTGTTTACTGGGCTAGTGACTCCAAGGAGGTTTTTACGATTCTGAGCGCCTGCTGACAGCCTTCCCTACAGTTGACAGAGATACTCAGTTTAACCGAAGGAGGAAGGCATGCTGCCTTTAGTTGGAGCTGAGTTGACACCAGTGCAGCTCTATCGACATCTCCTCAGATGTTGCAGGCAGTTACCAACCCCAGCAATGCAGAAACATTATCGACATGCCATAAGACAGGGTTACATCAGTCACTCCGATGAAGACGACCAAGAGAGGATACAAATGATAATCCAAAGAGCTATTGCTGATGCAGACTGGATTCTTGATAAActggtttcagtcacgtgacACCGGCTCTGAACGAAAACGCGTCGTGGATTAGACAGTATACAAAGAAGAAGTGAAGTTCATAATCCATGAATACGTCCTCGGGTGTAGCATTTTGCAGAGCTGCACCTGACATGAATCATAGTGGTGGATGCACCGTTTCTATGTCTGACTTTTGAGTGCCCATTGTGTTATTTGTCCTCGTTATTGTGGGGATGTGAACAGTCATGGTCAAGTCAGCTTTATTGTCAGATGTGCTATACATGAAATTTCAGTCCTCTCGGACCCCCGGTGCAAAGCAAACATGATGAAAGGAAGGCCTCACGAGTCATCGACTCTTATACTATACTGTATGAAATGACTGCTCAATTGAATAT
>XM_039818446.1
gcagagtaaggTGGGTCATGCCGTCGCCATCCTTGGAAAACCCAAATTTGCGGCACATTGGTGTTGTTTACTGGGCTAGTGACTCCAAGGAGGTTTTTACGATTCTGAGCGCCTGCTGACAGCCTTCCCTACAGTTGACAGAGATACTCAGTTTAACCGAAGGAGGAAGGCATGCTGCCTTTAGTTGGAGCTGAGTTGACACCAGTGCAGCTCTATCGACATCTCCTCAGATGTTGCAGGCAGTTACCAACCCCAGCAATGCAGAAACATTATCGACATGCCATAAGACAGGGTTACATCAGTCACTCCGATGAAGACGACCAAGAGAGGATACAAATGATAATCCAAAGAGCTATTGCTGATGCAGACTGGATTCTTGATAAATATACAAAGAAGAAGTGAAGTTCATAATCCATGAATACGTCCTCGGGTGTAGCATTTTGCAGAGCTGCACCTGACATGAATCATAGTGGTGGATGCACCGTTTCTATGTCTGACTTTTGAGTGCCCATTGTGTTATTTGTCCTCGTTATTGTGGGGATGTGAACAGTCATGGTCAAGTCAGCTTTATTGTCAGATGTGCTATACATGAAATTTCAGTCCTCTCGGACCCCCGGTGCAAAGCAAACATGATGAAAGGAAGGCCTCACGAGTCATCGACTCTTATACTATACTGTATGAAATGACTGCTCAATTGAATATAATATTCactatctataaaaaaaaaagtgtaaatacTGTTCTTAGATTGAAATGAGTTGACTATATACtgaattcaataaattattctCAATATGTATA
>XM_039818454.1
gcagagtaaggTGGGTCATGCCGTCGCCATCCTTGGAAAACCCAAATTTGCGGCACATTGGTGTTGTTTACTGGGCTAGTGACTCCAAGGAGGTTTTTACGATTCTGAGCGCCTGCTGACAGCCTTCCCTACAGTTGACAGAGATACTCAGTTTAACCGAAGGAGGAAGGCATGCTGCCTTTAGTTGGAGCTGAGTTGACACCAGTGCAGCTCTATCGACATCTCCTCAGATGTTGCAGGCAGTTACCAACCCCAGCAATGCAGAAACATTATCGACATGCCATAAGACAGGGTTACATCAGTCACTCCGATGAAGACGACCAAGAGAGGATACAAATGATAATCCAAAGAGCTATTGCTGATGCAGACTGGATTCTTGATAAActggtttcagtcacgtgacACCGGCTCTGAACGAAAACGCGTCGTGGATTAGACAGTATACAAAGAAGAAGTGAAGTTCATAATCCATGAATACGTCCTCGGGTGTAGCATTTTGCAGAGCTGCACCTGACATGAATCATAGTGGTGGATGCACCGTTTCTATGTCTGACTTTTGAGTGCCCATTGTGTTATTTGTCCTCGTTATTGTGGGGATGTGAACAGTCATGGTCAAGTCAGCTTTATTGTCAGATGTGCTATACATGAAATTTCAGTCCTCTCGGACCCCCGGTGCAAAGCAAACATGATGAAAGGAAGGCCTCACGAGTCATCGACTCTTATACTATACTGTATGAAATGACTGCTCAATTGAATATAATATTCactatctataaaaaaaaaagtgtaaatacTGTTCTTAGATTGAAATGAGTTGACTATATACtgaattcaataaattattctCAATATGTATA

Function

symbol description
lyrm9 Orthologous to human LYRM9 (LYR motif containing 9).

NR:

description
PREDICTED: LYR motif-containing protein 9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23562 False 655 lncRNA 0.47 4 15646740 15651000
TU23563 False 711 lncRNA 0.39 5 15646740 15651000
XM_039818446.1 False 801 mRNA 0.42 4 15646641 15651047
XM_039818454.1 True 857 mRNA 0.43 5 15646641 15651047

Neighbor

gene id symbol gene type direction distance location
tnfaip1 tnfaip1 coding downstream 8685 15626090 ~ 15637956 (-)
sgsm2 sgsm2 coding downstream 22381 15538653 ~ 15624260 (-)
ppm1da ppm1d coding downstream 354426 15282746 ~ 15292215 (-)
brip1 LOC104966431 coding downstream 364726 15187451 ~ 15281915 (-)
opa3 opa3,LOC102789315 coding downstream 869264 14775034 ~ 14777377 (-)
LOC120570576 LOC104937503,LOC103370335,LOC101474512 coding upstream 426 15651473 ~ 15682792 (-)
LOC120549823 NA coding upstream 44757 15695804 ~ 15698453 (-)
LOC120549813 NA coding upstream 51932 15702979 ~ 15706276 (-)
LOC120553928 NA coding upstream 73110 15724157 ~ 15726157 (-)
sorl1 NA coding upstream 253842 15904889 ~ 16008065 (-)
G17264 NA non-coding downstream 3651 15642003 ~ 15642990 (-)
G17253 NA non-coding downstream 111414 15533876 ~ 15535227 (-)
G17225 ulk2,LOC104954052 non-coding downstream 205131 15434214 ~ 15441510 (-)
G17222 NA non-coding downstream 250302 15396102 ~ 15396339 (-)
G17221 NA non-coding downstream 253221 15393206 ~ 15393420 (-)
LOC120549843 NA non-coding upstream 62085 15713132 ~ 15714089 (-)
G17389 NA non-coding upstream 365875 16016922 ~ 16048016 (-)
G17466 NA non-coding upstream 749576 16400623 ~ 16400836 (-)
G17499 NA non-coding upstream 766248 16417295 ~ 16418742 (-)
G17571 NA non-coding upstream 1045766 16696813 ~ 16698009 (-)
si:ch1073-145m9.1 LOC104930674,LOC104957430,LOC102079100,LOC108239365,LOC105418711 other downstream 320842 15318840 ~ 15325799 (-)
caln1 caln1,LOC103372560,LOC107097061 other downstream 1323808 14247928 ~ 14322833 (-)
gpr4 gpr4,LOC103368504,LOC104964910 other downstream 1559877 14078577 ~ 14086764 (-)
G16880 NA other downstream 1823584 13755949 ~ 13823057 (-)
si:ch211-14c7.2 LOC103364094,LOC102787713,LOC101474093,LOC102298349,LOC106947863,LOC103138296,LOC106921473 other downstream 1884273 13662907 ~ 13762368 (-)
G17287 NA other upstream 44507 15695554 ~ 15719041 (-)
sdhdb sdhd other upstream 394961 16046008 ~ 16060408 (-)
G17597 NA other upstream 1197114 16848161 ~ 16930994 (-)
xaf1 LOC107094331 other upstream 1821900 17472947 ~ 17478903 (-)
LOC120552194 NA other upstream 2148952 17799999 ~ 17890661 (-)

Expression


Co-expression Network