G17287


Basic Information

Item Value
gene id G17287
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 15695554 ~ 15719041 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU23589
TTTACTTGAAGAGTGACATTCCTTCTTttggggatggtgtgttaatTTAGCTTATCGTCTCCACTGTGCATTGTTCATGATTGAACATATTGTCCTATGACTTTGAAATGGAATGTGACACGGATGGATCTCAGCCTAATATGTGATGTTTGCTTCTTTTACGATGATATGACGTGTGGAGGAGAGCTATAAAAGTTAGTGAGTAAGAGTCCTTCCAACAGAACGAGGACCAGgagctactactactactactactactactactactactacagATAACTGTTCAGGTTCAGTCTGGTGTTCAGCAGTCAGAATGATGACTCCCGCTCTCCTCTCTGTGGCCTTGCTGCTGTTGCTTCTTCCTGGGGTTCCATCTGCAGATCCCACTCTATATCCCATCAGTGTCCTGGTGAAAAACTCTGTAAACCACAGTCCCAATAAGACcTACAGCACTTCTGTGGTTTACAGAGGAATCTTGCTGGGTGGACTGACGAGACTGCAGAAGTCAAACAAAGGCTTTAGGTTCACCTACACACAGGATCCAAACTATGGCCCGTTCCTACAGAGTGTGAACGGTTTGGCTGGAAGTCAACAAAAACGCACCTACTGGGAGCTGCTGGTCAAGCCTGCAAACAACGTGACATTCCGTCCTGATGTCGGTATTGGATGTTACATCCCAAATCCGAATGACTTAATCATCCTGAACTATGCCAAGTACTAAAGGATGAGCAGCCGCTGGAAATCTCCATGGGATCAAAGCCAGATTCAACTGTATGATTATGTATTTCACATATTATGATTCAACAAAAATGAATTTGTGTTTCTTATTTAGCGAGAAATAAAGGGGTGATAAATGGCTGCTAATGTAAACAGTGTGCTAAATGCAGTAAGAAAACTGACTGTTTATAGTACTGACCAGCAAAGAGCTGACTTTATTTTCCCATGGGAATCCCTACCTTCACCTTAAATTGTTCTGCTTGTTAACCAGATACTTTCTCATTCCTTCTTTAATAACATACTACTGTAATACACCTGCTTTGTGTGAATCTTTATGAATCAagactaaagttagggaggttatggaggaattaagtaaacattttcacttctatttcaaaatgtttgtgtaatggcagccataacattaatgagcaggtgctgaggaggagaagaatgaagagaaagagagacaaattggctattttggccttttgtggggttatggctgcaaattcactacagGGGTCTGTCTGACCGGACGACCGATTTGcagcagtctgaacgtagcctagaCTGCTGAAACACATTGGATATCATATTCAAAACGCAAACATAATGTCAGCTGTTTATCCATAATGTTAATTAACCTTTGAACCCCCTTAAAAGTCAAACAtggaagaatatttattattcaGATGATATTATAACTCAACATTAAACACAGAtgcatgttgtttgtttgttcactTATGAAAATACATTGTCAAACAACACCGGCTCTGATCTCATGTTGATGTACTGTGGCTGCTGAATCTTCACCACTTAGTAAATTTCAGGATGATTTGCTCGTTTTCACTGGGAATGTAGCATCCAATACCTGCACAAAAAGATCCATAATGTGATATACAGTAAAAATGACTACAAGAAAGACTGATCAACAGACATATGCATAGTGGACTTACCAACGTCAGGTCTTATGATTTTGCCATCTGGAGTCTTAACCAGCAGCTCCCAGTATGTATGGTCTTTATCATTTCCAGCCACTCCATTCACACTCTCCAGGTACGGGCCATAGTTTGGATCCTCTGTGTAGGTGAACCTGCAGGACCAAACAGAAGAACAATTGATTTGTTAATCTTAGGT
>TU23597
actaaagttagggaggttatggaggaattaagtaaacattttcacttctatttcaaaatgtttgtgtaatggcagccataacattaatgagcaggtgctgaggaggagaagaatgaagagaaagagagacaaattggctattttggccttttgtggggttatggctgcaaattcactacagGGGTCTGTCTGACCGGACGACCGATTTGcagcagtctgaacgtagcctagaCTGCTGAAACACATTGGATATCATATTCAAAACGCAAACATAATGTCAGCTGTTTATCCATAATGTTAATTAACCTTTGAACCCCCTTAAAAGTCAAACAtggaagaatatttattattcaGATGATATTATAACTCAACATTAAACACAGAtgcatgttgtttgtttgttcactTATGAAAATACATTGTCAAACAACACCGGCTCTG
>TU23599
TTTACTTGAAGAGTGACATTCCTTCTTttggggatggtgtgttaatTTAGCTTATCGTCTCCACTGTGCATTGTTCATGATTGAACATATTGTCCTATGACTTTGAAATGGAATGTGACACGGATGGATCTCAGCCTAATATGTGATGTTTGCTTACGATGATATGACGTGTGGAGGAGAGCTATAAAAGTTAGTGAGTAAGAGTCCTTCCAACAGAACGAGGACCAGgagctactactactactactactactactactactactactactacagATAACTGTTCAGGTTCAGTCTGGTGTTCAGCAGTCAGAATGATGACTCCCGCTCTCCTCTCTGTGGCCTTGCTGCTGTTGCTTCTTCCTGGGGTTCCATCTGCAGATCCCACTCTATATCCCATCAGTGTCCTGGTGAAAAACTCTGTAAaccaaagtcccaataagaccTACAGCACTTCTGTGGTTTACAGAGGAATCTTGCTGGGTGGACTGACGAGACTGCAGAAGTCAAACAAAGGCTTTAGGTTCACCTACACACAGGATCCAAACTATGGCCCGTTCCTACAGAGTGTGAACGGTTTGGCTGGAAGTCAACAAAAACGCACCTACTGGGAGCTGCTGGTCAAGCCTGCAAACAACGTGACATTCCGTCCTGATGTCGGTATTGGATGTTACATCCCAAATCCGAATGACTTAATCATCCTGAACTATGCCAAGTACTAAAGGATGAGCAGCCGCTGGAAATCTCCATGGGATCAAAGCCAGATTCAACTGTATGATTATGTATTTCACATATTATGATTCAACAAAAATGAATTTGTGTTTCTTATTTAGCGAGAAAGCAAGGGGGGTGATAAATGGCTGCTAATGTAAACAGTGTGCTAAATGCAGTAAGAAAACTGACTGTTTATAGTACTGACCAGCAAAGAGCTGACTTTATTTTCCCATGGGAATCCCTACCTTCACCTTAAATTGTTCTGCTTGTTAACCAGATACTTTCTCATTCCTTCTTTAATAACATACTACTGTAATACACCTGCTTTGTGTGAATCTTTATGAATcaagaaacaaaaataaaaatctcttTTACAGCATCAAA
>TU23600
TTTACTTGAAGAGTGACATTCCTTCTTttggggatggtgtgttaatTTAGCTTATCGTCTCCACTGTGCATTGTTCATGATTGAACATATTGTCCTATGACTTTGAAATGGAATGTGACACGGATGGATCTCAGCCTAATATGTGATGTTTGCTTCTTTTACGATGATATGACGTGTGGAGGAGAGCTATAAAAGTTAGTGAGTAAGAGTCCTTCCAACAGAACGAGGACCAGgagctactactactactactactactactactactactacagATAACTGTTCAGGTTCAGTCTGGTGTTCAGCAGTCAGAATGATGACTCCCGCTCTCCTCTCTGTGGCCTTGCTGCTGTTGCTTCTTCCTGGGGTTCCATCTGCAGATCCCACTCTATATCCCATCAGTGTCCTGGTGAAAAACTCTGTAAaccaaagtcccaataagaccTACAGCACTTCTGTGGTTTACAGAGGAATCTTGCTGGGTGGACTGACGAGACTGCAGAAGTCAAACAAAGGCTTTAGGTTCACCTACACACAGGATCCAAACTATGGCCCGTTCCTACAGAGTGTGAACGGTTTGGCTGGAAGTCAACAAAAACGCACCTACTGGGAGCTGCTGGTCAAGCCTGCAAACAACGTGACATTCCGTCCTGATGTCGGTATTGGATGTTACATCCCAAATCCGAATGACTTAATCATCCTGAACTATGCCAAGTACTAAAGGATGAGCAGCCGCTGGAAATCTCCATGGGATCAAAGCCAGATTCAACTGTATGATTATGTATTTCACATATTATGATTCAACAAAAATGAATTTGTGTTTCTTATTTAGCGAGAAAGCAAGGGGGGTGATAAATGGCTGCTAATGTAAACAGTGTGCTAAATGCAGTAAGAAAACTGACTGTTTATAGTACTGACCAGCAAAGAGCTGACTTTATTTTCCCATGGGAATCCCTACCTTCACCTTAAATTGTTCTGCTTGTTAACCAGATACTTTCTCATTCCTTCTTTAATAACATACTACTGTAATACACCTGCTTTGTGTGAATCTTTATGAATcaagaaacaaaaataaaaatctcttTTACAGCATCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23589 True 1863 TUCP 0.38 6 15702609 15714263
TU23597 False 441 lncRNA 0.55 2 15710784 15719041
TU23599 False 1098 TUCP 0.41 5 15695554 15706455
TU23600 False 1097 TUCP 0.56 5 15695554 15714263

Neighbor

gene id symbol gene type direction distance location
LOC120570576 LOC104937503,LOC103370335,LOC101474512 coding downstream 12762 15651473 ~ 15682792 (-)
tnfaip1 tnfaip1 coding downstream 57598 15626090 ~ 15637956 (-)
sgsm2 sgsm2 coding downstream 71294 15538653 ~ 15624260 (-)
ppm1da ppm1d coding downstream 403339 15282746 ~ 15292215 (-)
brip1 LOC104966431 coding downstream 413639 15187451 ~ 15281915 (-)
LOC120553928 NA coding upstream 5116 15724157 ~ 15726157 (-)
sorl1 NA coding upstream 185848 15904889 ~ 16008065 (-)
bco2b bco2,LOC104948304,LOC101485476,LOC102288764 coding upstream 297357 16016398 ~ 16023501 (-)
il4i1 il4i1 coding upstream 345403 16064444 ~ 16072903 (-)
LOC120547208 adamts15 coding upstream 471090 16190131 ~ 16208976 (-)
G17264 NA non-coding downstream 52564 15642003 ~ 15642990 (-)
G17253 NA non-coding downstream 160327 15533876 ~ 15535227 (-)
G17225 ulk2,LOC104954052 non-coding downstream 254044 15434214 ~ 15441510 (-)
G17222 NA non-coding downstream 299215 15396102 ~ 15396339 (-)
G17221 NA non-coding downstream 302134 15393206 ~ 15393420 (-)
G17389 NA non-coding upstream 297881 16016922 ~ 16048016 (-)
G17466 NA non-coding upstream 681582 16400623 ~ 16400836 (-)
G17499 NA non-coding upstream 698254 16417295 ~ 16418742 (-)
G17571 NA non-coding upstream 977772 16696813 ~ 16698009 (-)
G17579 NA non-coding upstream 991728 16710769 ~ 16766469 (-)
lyrm9 lyrm9 other downstream 44507 15646641 ~ 15651047 (-)
si:ch1073-145m9.1 LOC104930674,LOC104957430,LOC102079100,LOC108239365,LOC105418711 other downstream 369755 15318840 ~ 15325799 (-)
caln1 caln1,LOC103372560,LOC107097061 other downstream 1372721 14247928 ~ 14322833 (-)
gpr4 gpr4,LOC103368504,LOC104964910 other downstream 1608790 14078577 ~ 14086764 (-)
G16880 NA other downstream 1872497 13755949 ~ 13823057 (-)
sdhdb sdhd other upstream 326967 16046008 ~ 16060408 (-)
G17597 NA other upstream 1129120 16848161 ~ 16930994 (-)
xaf1 LOC107094331 other upstream 1753906 17472947 ~ 17478903 (-)
LOC120552194 NA other upstream 2080958 17799999 ~ 17890661 (-)
zgc:165508 fam131a,LOC102799247 other upstream 2408425 18127466 ~ 18151968 (-)

Expression


Co-expression Network