G17573 (LOC103377790)


Basic Information

Item Value
gene id G17573
gene name LOC103377790
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 16846534 ~ 17063332 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU24033
ttaccatgATGCAGCTGGTCAGGTAGTTGAAGGTGGTGGCCTTCAGTTCAAAGTGCTCCCCCCGGATGATGGAGTAGGGCAGGCTGAGCTCCAGGAAGAAGGGCTGGAAGACGGTGATGTTTTTACGTGGAGCCAAGCCGAAACCCTGAGGGGACAGACAGAAAGCCTCCGTCTCCCAGGTGGTGATGGTGTCTGGGACAGTGAGGGACACATCCTTCGTTCCAGACTCTCTGGACCCAACTTCCACCAGGTCCCATATCCAGGTCTCAGGGAAGAAAGTGCGGACTGTCACTATTGGCGATTTATCAGGAGACGACATATCAGGGGCCGCAGCAGCTGCAGGGACACCAGCTGCCATGACTTCTTTCCTTATGGCTATGGTAGGAAGAAAGTAGAAA
>TU24037
CATGATGCAGCTGGTCAGGTAGTTGAAGGTGGTGGCCTTCAGTTCAAAGTGCTCCCCCCGGGGGCCATGGTCCAGCTGAGGGTCTTGCGCTCACTGCCACACAGACAGGATGTGTACTGGTCACCAGAGAGGGGGGTGAGGGTGTAATCTAAGGAGGGGGTTGGAGTCACACTGAGGGTCTTGCGCTCACTGCCACACAGACAGGATGTGTACTGGTCACCAGAGAGGGGGGTGAGGGTGTAATCTAAGGAGGGGGTTGGAGTCACAGTGAC

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: alpha-2-macroglobulin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24033 True 398 lncRNA 0.38 3 16927681 17063332
TU24037 False 272 lncRNA 0.46 3 16846534 16928490

Neighbor

gene id symbol gene type direction distance location
usf1 usf1 coding downstream 181852 16655490 ~ 16664682 (-)
LOC120548132 LOC104926451,LOC103375127,LOC106906251,LOC103154322 coding downstream 191194 16644120 ~ 16655340 (-)
ubash3bb ubash3b,LOC104926453 coding downstream 202651 16599794 ~ 16643883 (-)
LOC120549238 NA coding downstream 250446 16592319 ~ 16596088 (-)
arcn1b arcn1,LOC103368493 coding downstream 266880 16564562 ~ 16579654 (-)
gemin4 NA coding upstream 92360 17155692 ~ 17162704 (-)
tmem199 tmem199 coding upstream 164192 17227524 ~ 17230365 (-)
LOC120544259 ecel1 coding upstream 441467 17504799 ~ 17634049 (-)
zgc:153039 LOC103359447,LOC103377809 coding upstream 602486 17665818 ~ 17743624 (-)
LOC120573061 LOC100706961,LOC103359448 coding upstream 1055965 18119297 ~ 18124891 (-)
G17579 NA non-coding downstream 80065 16710769 ~ 16766469 (-)
G17587 NA non-coding downstream 91218 16721574 ~ 16755316 (-)
G17588 NA non-coding downstream 106758 16723407 ~ 16739776 (-)
G17571 NA non-coding downstream 148525 16696813 ~ 16698009 (-)
G17499 NA non-coding downstream 427792 16417295 ~ 16418742 (-)
G17629 NA non-coding upstream 32155 17095487 ~ 17095734 (-)
G17633 NA non-coding upstream 41495 17104827 ~ 17202743 (-)
G17636 NA non-coding upstream 70294 17133626 ~ 17136419 (-)
G17637 NA non-coding upstream 73552 17136884 ~ 17140605 (-)
G17638 LOC103369551,LOC106930551,LOC103140705,LOC103474949 non-coding upstream 75131 17138463 ~ 17141048 (-)
sdhdb sdhd other downstream 786126 16046008 ~ 16060408 (-)
G17287 NA other downstream 1127493 15695554 ~ 15719041 (-)
lyrm9 lyrm9 other downstream 1195487 15646641 ~ 15651047 (-)
si:ch1073-145m9.1 LOC104930674,LOC104957430,LOC102079100,LOC108239365,LOC105418711 other downstream 1520735 15318840 ~ 15325799 (-)
caln1 caln1,LOC103372560,LOC107097061 other downstream 2523701 14247928 ~ 14322833 (-)
xaf1 LOC107094331 other upstream 409615 17472947 ~ 17478903 (-)
LOC120552194 NA other upstream 736667 17799999 ~ 17890661 (-)
zgc:165508 fam131a,LOC102799247 other upstream 1064134 18127466 ~ 18151968 (-)
LOC120545639 eif4g1 other upstream 1115681 18179013 ~ 18222893 (-)
fbxo46 fbxo46,LOC102786997 other upstream 2637895 19701227 ~ 19717307 (-)

Expression


Co-expression Network