G17588


Basic Information

Item Value
gene id G17588
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 16723407 ~ 16739776 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU24081
TTAAATGTAatggtttatttaaaatgtgactgAGAACATGTCTTCAAGCTGCAAcggaaataaaataagtcactTTAAGATTAACGGTTGTCTCAAAATACTTGAGCTGTATTGTGTCTGTAGGTTAAGATATATGGACTAAGTTTatcattttgtaaaataatcTGTTACCTGCAGCACAGGGGTCATTTGTCTCAGCCTGATCACCTGAGTTGGTGAGGGTTTACATGCatattatgaaatatatatttgcTAAACTTTTATTTCCAACTGCTTTAGGAGATGGGATTTGTAGATTCTCCAAGAGTCTGAGAGAGTTTAGATGTTATCTAAAGAACACTTTTTACTTTTGTGACCGCATTTCCACACTGCTGAGCTGCACAACTTCTGGTCTTTGGATAAAACACATACGATAAATACACAGCAGAAAGATTAAACCGTGGAAAAAGTTCAACAAAAGACCAGTTTCAAACGGGACATTAACGTCACATTATTTAATTGTCCATCATGCATGTATTTCACTTCAGACACAGTAGTTACACAGCTGTAAGGGGTTGTAGCAGAATACTAACAAGGAAATACAAACAGACATGGTATTAGTACATAATATGTATCTTCTGGACGACTGGAGGACTGACCACACGCTCTTCAAGCTGCAATAGatataatgaaaaataaaaattcattGCAAAGACTTAAGCCTGTTCATACCAAAGATTTGACACCTGACAGTTTACACCAGTGCTACTATATGAGACAGTGTATCCTCTTCATAGCAACGACTTTGTAGACCTACTTCCATTTGAACTTCCAGCTCTTTTGTAGCTGTATATAATTTGTAGCATATGAATGAGGATAGTTAATAATGTAGACCTACTTCCATTTGAACTTCCAGCTCTTTTTGTAGCTGTATATAATTTGTAGCATATGAATGAGGATAGTTAATAATTTCCAGTAGTGATGAAAtggcaaaaacaaataaaaaaaaagcatttttttttctaattattttttatgatttgataGAGCATCTGGAGAATAGCATGACATGGGGGAAGATAGAAGTGATGACATTCAGCAAATACTGTAGGCCACAGATTGGATTTGAACAACGGCCGCTGctaaggactcagcctacatggggcacacgctctACCGGCTGAGCTAGAGGTCGTCCCACATAACATAACAGACAAGAGATCTCCCCTCTTTTGTCCATTTCTCCCGTCTAATCGGCAGTTCCATCGTTTAGGGGAGATGGTGTCACATCTGATCAGCCAAACATTTTCGACCAGCTGACAGTTTGTAACTGACTTGACCAGCTGACTTCGCTACGAGCTAATTGGCTGTTCAAACAGGTGACGTgccttacgttctaaaaccagccaaTGTCGACTTGACAAACCGATTCGCAGGCGACACCATCAGACTGCTGCAACGttctaaaatgttttttcctCGTTGCAACTCTTTGGTGTGATCTGGGCTTTACAGTCTACACTAGTTGTATGCTTCATTTGGTTTTAGGTTACAAAATTGGCACTTTTACAATCTTTTAAACAATTCCAATGTACAGTTACATACGCCATAGTGCTTCTGTATGTTATTACAGTTTGTTACCTGCAACACAAGGGTGGATGTATTCTGTATCAGACTGGTCACCTTAAAGGGAAAAAAGTAGAAAATTAGTCAAACTTGCATCATATGTTCAATAGCCTATCATATTAACATACTACCATAAATGACTATTCTGATAACTGTTCAGGTTGTTGTACAGCTACCACGGAGCAGTGTGTGCTGTGACTTCTGTGAATGAGGTTTAGAGAGAACTGATTTACTTGGCTGGTAGTAGTCGTAGATCTTGACCACGGCTGGCTTCAGGTTCTGCACTTGGTGCTCCTGTATGAGCTTCAGGCTGTGGTTGATGCCTATGTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24081 True 1937 lncRNA 0.43 2 16723407 16739776

Neighbor

gene id symbol gene type direction distance location
usf1 usf1 coding downstream 58725 16655490 ~ 16664682 (-)
LOC120548132 LOC104926451,LOC103375127,LOC106906251,LOC103154322 coding downstream 68067 16644120 ~ 16655340 (-)
ubash3bb ubash3b,LOC104926453 coding downstream 79524 16599794 ~ 16643883 (-)
LOC120549238 NA coding downstream 127319 16592319 ~ 16596088 (-)
arcn1b arcn1,LOC103368493 coding downstream 143753 16564562 ~ 16579654 (-)
LOC120551331 NA coding upstream 207980 16947756 ~ 16949836 (-)
gemin4 NA coding upstream 415916 17155692 ~ 17162704 (-)
tmem199 tmem199 coding upstream 487748 17227524 ~ 17230365 (-)
LOC120544259 ecel1 coding upstream 765023 17504799 ~ 17634049 (-)
zgc:153039 LOC103359447,LOC103377809 coding upstream 926042 17665818 ~ 17743624 (-)
G17571 NA non-coding downstream 25398 16696813 ~ 16698009 (-)
G17499 NA non-coding downstream 304665 16417295 ~ 16418742 (-)
G17466 NA non-coding downstream 322571 16400623 ~ 16400836 (-)
G17389 NA non-coding downstream 675391 16016922 ~ 16048016 (-)
LOC120549843 NA non-coding downstream 1009318 15713132 ~ 15714089 (-)
G17573 LOC103377790 non-coding upstream 106758 16846534 ~ 17063332 (-)
G17574 NA non-coding upstream 152334 16892110 ~ 17059241 (-)
G17584 NA non-coding upstream 163304 16903080 ~ 17035990 (-)
G17609 NA non-coding upstream 199772 16939548 ~ 16947564 (-)
G17629 NA non-coding upstream 355711 17095487 ~ 17095734 (-)
sdhdb sdhd other downstream 662999 16046008 ~ 16060408 (-)
G17287 NA other downstream 1004366 15695554 ~ 15719041 (-)
lyrm9 lyrm9 other downstream 1072360 15646641 ~ 15651047 (-)
si:ch1073-145m9.1 LOC104930674,LOC104957430,LOC102079100,LOC108239365,LOC105418711 other downstream 1397608 15318840 ~ 15325799 (-)
caln1 caln1,LOC103372560,LOC107097061 other downstream 2400574 14247928 ~ 14322833 (-)
G17597 NA other upstream 108385 16848161 ~ 16930994 (-)
xaf1 LOC107094331 other upstream 733171 17472947 ~ 17478903 (-)
LOC120552194 NA other upstream 1060223 17799999 ~ 17890661 (-)
zgc:165508 fam131a,LOC102799247 other upstream 1387690 18127466 ~ 18151968 (-)
LOC120545639 eif4g1 other upstream 1439237 18179013 ~ 18222893 (-)

Expression


Co-expression Network