G18429


Basic Information

Item Value
gene id G18429
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 21113372 ~ 21115994 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU25204
aactttgcagtgtctgaaatatgagagtctcccatgtgtttctatgtagtttgctcaaaccaatcagcgcgtagctcattctgaatattcatgagcataccatatttggaagaaaagctcttgttccaaatagagccatattcacagggtagttaagggcctaataaaatatcattcgggcaattttcagcccaaccaatgttacataccccattaggagaccttaaggaacagtgtaaaataccctatataatcattctatcacccctttaaattaaaatacatacCACACACAGTGTTGCTTAGAACAGCAACATATTCACATACTAAACCTTCACAGGTAAAAGCAACAGACTATTACTATtaaacttattaaaaaaaattataaaatcaaATTTCGGACTAAACTTAGCACAAtaaaaaacatactgtacatgcagtgAGCAAACTAAGACATATACACTGTATGATGTGTAGGAGAATATTATCAGTATTggaacaaatacaaatacatacaatttGCAGGTCACTTTCTGGAATAAAGCCTGAGGGCTTCTCTTTGGACtctctgctgtgatgttcatggGGATGTCCAGAACCACATGACTGATGATGGTTGTGTATCAATATAAACTAGCCTCTTTTGTAAATAGTCTTTGATACTTGTTATTTAGGAACTGTAGTTCTGGTTACAATATTATTAAATGGTAAATCTAGGACACATATAATTTGCCTGTGTTCTAGCGGTTTGTAATACGACGCTCGTTTTGGAtggtcaaaaaatgtttttccgttCTCCCTCCTTCACAAGGAGAAGTAGATATAAAGATGGTCCCAatctaaaaacaaataaataaaagaaaatgcgaGAGGACCTCTGTCAAATCGCTCTGTACCCAATCAATTTGGAAACAGGATCTAACCGACCCTTGAGCAGCTTTGTGGCATTTCAGCCTGAGCTTTTCAGGTTATCCAGTAACTTTTTTTAATAGACAGGTTGTTGCCAAATTGCCAATATTGTCCATCTCCTCTACTTTCTCTGGGATTGTTCCTTCATATTTCTATAGATCTTCCTCTGAGCTGGAGGAGCTGGGCAGAAGAACACACTCCTGTCTCCTGCCCCTTTTTCGTCTCCTGTTTGCAATTCGTAGCCTCCTGCGGATCACATCTGCCACACTGTCGTAGTCCTGTCGTGGGTCGTGCCAGTAAAGGCTGGGCGTGGTCCTCCAGTGGCGGTACAGGCGTGTGTGAAGCACTGACAGGGTCAGGAGAATCAGCAGGAAGCCCAGCGCTGCTGCCGCCCACGCTCCCTCGTCTGTCCTGGGGGTCCTCGGCAACCCTTTATTCACGAGAGCGGCTGAGGCCTCGTTGCATTCACAGTGTTCGGCTCCTCTGCAGCTGACGCAGTCGTGGCTGTTGGGCAGGGAAGTGGCTGGCTGCGGGTTCTGGTGCTGTTGTGGCTGAGGCGGAGACTCTGATTGGGATTTGGAAACCGAACCAAAGCCAATCTTTTCACTTTTGTGCTGAGAGTGCGTGTCACCGTGCGTTTGCTTACGTTCCAACTCTCTCTCTTTAACGTTTACCACGTCATTGGCCTTCATTGTGCCGTCTGCTGTGTTGCCTTTATCAAAGTTTTTCTCTTCAGAGATTTTCTCTTTCAGGCTGTGTCTAACAGAGTCATTGTCCCTCTGCTTGGCTGAGTCTATACCTTCATCTTTGGAACCGAGGACCCTGGCTTCGGGCCTCGCGCTATCATTATGTTCACTGTTCACACCGTCTGCATGAACATCCAACCCAGCAGAGGGGTTTGGGTTTCTGAGGTCAGACATATTTGACTCCAGAGGAGCTGTGGGCGTTGGTTTAAGGCTCCGTTTTGTACTCTGGATCTTAGATTGAGAAGGAGCTTCCCTGGGACCTGGAGGATCTGAGAGAGTCCTGTTCCCTGGAAGAGAACCTGCTGATGGTCCAAGCGTACCGTTGTAGTTCTGGAAGTTCCCCGTCCTGCCGCTGGTGGTTCTGGTGGTctggtgtgttgttgtgttttgtctctCATTCTCATCCTTAACATTCTGCTGTTTTTCTCTAATGGCAGCTCTCATCTGCCtcctttttccttcttctttcatTTGTCTCAAGCGTTCCTTCTTCCCGTTGGACTCTAGCTCTTTGTCCGTCGCGCCATTCAGCAGAGAAGAGATGGTCTGCTCGCAGCATCGCCTCAGAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25204 True 2226 lncRNA 0.40 2 21113372 21115994

Neighbor

gene id symbol gene type direction distance location
LOC120573880 NA coding downstream 4608 21097940 ~ 21108764 (-)
igsf11 igsf11,LOC102790613 coding downstream 32597 20963840 ~ 21080775 (-)
LOC120574226 lsamp,LOC106534328 coding downstream 164393 20225831 ~ 20948979 (-)
sidt2 sidt2 coding downstream 1035229 20059933 ~ 20078143 (-)
LOC120550021 NA coding downstream 1082584 20028341 ~ 20030788 (-)
git1 git1,LOC102788862 coding upstream 5870 21121864 ~ 21151383 (-)
ssh2a ssh2,ssh2a coding upstream 79394 21195388 ~ 21227407 (-)
blmh blmh coding upstream 151710 21267704 ~ 21290294 (-)
rap1gap2a rap1gap2,LOC102786908 coding upstream 179355 21295349 ~ 21405528 (-)
LOC120573852 LOC101479958 coding upstream 301322 21417316 ~ 21435893 (-)
LOC120575525 NA non-coding downstream 26497 21085093 ~ 21086875 (-)
G18391 NA non-coding downstream 176123 20936993 ~ 20937249 (-)
G18385 NA non-coding downstream 225343 20887806 ~ 20888029 (-)
G18382 NA non-coding downstream 339450 20773635 ~ 20773922 (-)
G18381 NA non-coding downstream 406587 20706521 ~ 20706785 (-)
G18492 NA non-coding upstream 294914 21410908 ~ 21411199 (-)
G18591 NA non-coding upstream 411461 21527455 ~ 21583403 (-)
LOC120572042 NA non-coding upstream 414003 21529997 ~ 21532755 (-)
G18626 NA non-coding upstream 516986 21632980 ~ 21695722 (-)
G18631 samsn1,LOC102311369,LOC107374247 non-coding upstream 535709 21651703 ~ 21652866 (-)
si:ch1073-340i21.1 NA other downstream 16171 21094177 ~ 21097201 (-)
LOC120547993 NA other downstream 971834 20137072 ~ 20141538 (-)
si:ch211-11n16.2 LOC104927205,LOC101481481,LOC100694251,LOC103369702,LOC107094496 other downstream 1303242 19800751 ~ 19810130 (-)
fbxo46 fbxo46,LOC102786997 other downstream 1396065 19701227 ~ 19717307 (-)
LOC120545639 eif4g1 other downstream 2890479 18179013 ~ 18222893 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other upstream 121194 21237188 ~ 21261923 (-)
LOC120572205 NA other upstream 494820 21610814 ~ 21615246 (-)
gdpd5b gdpd5,LOC103357216 other upstream 548082 21664076 ~ 21710363 (-)
LOC120551419 LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978 other upstream 867308 21983302 ~ 22007175 (-)
G18885 gramd1b other upstream 2023219 23139213 ~ 23148515 (-)

Expression


Co-expression Network