G18591


Basic Information

Item Value
gene id G18591
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 21527455 ~ 21583403 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU25431
tttctgcattttttgtgatttattttttttaaacaagtgcTCTTTCTGGAACTTGCTGTTACAAATCAAGTGTGGGACTGTTCCTACAGTAGGGGggaagagggggaggggaggagggcggccatttctgtgtttgcactgcatgtgtgtgtataagcgAATGgacgtgtgaatgtgtgaatgtgtgcgtgcataTGAGTGCAGGAGGTTGGATGAACAACCATTTTGATTCTCAGCCATCCATTTGTgtcttttttcatgttttgaaACTCTGAACAATTGCTGGAATATCGACAAGAGAGGACACTACACAAGACACTcaatggcctttttttttttatatatataaagggaACAAGCATGTAATTTATGATTGATGTGACCGGCTTGATGCTAAATTGACTCCGTCAGGAATAGAAACTAGGATCTCTTGCATGGCTAACCTTTTGCtttaaaagctgcattaattGAACTCGAAGTGATGCAGCAGTCAGTCCATGTCACTGTGTCCAAACTGACTTACCGAAATGGTAAGCTACATCTAGCTGCTGGTTGAAGGTGCAACAGCGAGTTTTCATTAAGGCCAGTCACTATGTGTTTAAGAGAGTAAGAATAGAAGGAAAGAGGAGAATAGAGACTAGACGCTTCAGCACAGTTGTTCCCCAACCTGTCTAGAGAGACCAatgtagacacacacagccATCCGCTGTCCTCGATCCAGTAATTCTCTCTCCCTAGCTGGAGAGTTAGGCACAaatcttttgtttattttctatttgtaaTATCTATGTAcgtttttaaagatatttttttaatattcccctatttaaacatttttttttttccaatttcaatCGTTGTTCCGTCTTTATGAAGAGGCCAAAAATTGACTGACTTGGTGGACGTTTAACACTTCAAATGATTCCACATTGATGTTtagaacctttttttttgttttctttaaaggtcccatgacatggtactctttggatgcttttatataggccttagtgttcccctaatactgtatctgaagtctctttccgggagggggtgtggccttgaccaactgccactttgctcatttgaaagccatgatgtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25431 True 1103 lncRNA 0.44 2 21527455 21583403

Neighbor

gene id symbol gene type direction distance location
LOC120551403 LOC102783338 coding downstream 12751 21507054 ~ 21514704 (-)
LOC120573866 LOC101481218,LOC101479958 coding downstream 25202 21490526 ~ 21502253 (-)
LOC120573817 LOC101479958 coding downstream 64960 21443343 ~ 21462495 (-)
LOC120573852 LOC101479958 coding downstream 91562 21417316 ~ 21435893 (-)
rap1gap2a rap1gap2,LOC102786908 coding downstream 121927 21295349 ~ 21405528 (-)
dhx40 dhx40 coding upstream 17126 21600529 ~ 21607740 (-)
LOC120572601 NA coding upstream 24641 21608044 ~ 21610638 (-)
gucy2f LOC103357218,LOC100708779 coding upstream 137586 21720989 ~ 21732143 (-)
mmp13b mmp13 coding upstream 170990 21754393 ~ 21758179 (-)
siae NA coding upstream 204137 21787540 ~ 21794944 (-)
G18492 NA non-coding downstream 116256 21410908 ~ 21411199 (-)
G18429 NA non-coding downstream 411461 21113372 ~ 21115994 (-)
LOC120575525 NA non-coding downstream 440580 21085093 ~ 21086875 (-)
G18391 NA non-coding downstream 590206 20936993 ~ 20937249 (-)
G18385 NA non-coding downstream 639426 20887806 ~ 20888029 (-)
G18626 NA non-coding upstream 49577 21632980 ~ 21695722 (-)
G18631 samsn1,LOC102311369,LOC107374247 non-coding upstream 68300 21651703 ~ 21652866 (-)
G18669 NA non-coding upstream 236586 21819989 ~ 21878764 (-)
G18758 NA non-coding upstream 564636 22148039 ~ 22148297 (-)
G18770 NA non-coding upstream 604860 22188263 ~ 22188687 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other downstream 265532 21237188 ~ 21261923 (-)
si:ch1073-340i21.1 NA other downstream 430254 21094177 ~ 21097201 (-)
LOC120547993 NA other downstream 1385917 20137072 ~ 20141538 (-)
si:ch211-11n16.2 LOC104927205,LOC101481481,LOC100694251,LOC103369702,LOC107094496 other downstream 1717325 19800751 ~ 19810130 (-)
fbxo46 fbxo46,LOC102786997 other downstream 1810148 19701227 ~ 19717307 (-)
LOC120572205 NA other upstream 27411 21610814 ~ 21615246 (-)
gdpd5b gdpd5,LOC103357216 other upstream 80673 21664076 ~ 21710363 (-)
LOC120551419 LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978 other upstream 399899 21983302 ~ 22007175 (-)
G18885 gramd1b other upstream 1555810 23139213 ~ 23148515 (-)
G18948 LOC103474743 other upstream 1663200 23246603 ~ 23252420 (-)

Expression


Co-expression Network