LOC120551419 (LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978)



Basic Information


Item Value
gene id LOC120551419
gene name LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 21983302 ~ 22007175 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU25608
AGGAGTACAGTCGGGTGTTTAGTGTTTACTTTTGGACAACTAACGTTAGGCTATACTAACGCTAGCTTCCCCTGACATCAGATACTGGTCACACTAGCTAGTTTAACATTCATTTTTCAtagacatgtttagttttttgaattAGTAATCCCGGAAGTAACGATACGAATAATTTAGCGTTGTGTACTTATGGGGTAGCTCAACTTCACTGGCGTTATCATATCATTTTTGCGAAACTGGAATAACGTTAGCCTATGTTAGATGTGACATAACCGTATACATTGAGATAACGGGATTCTAGTCCACATCGGAAAGAAAAAGATAACGTTATGTACTTTAAGTCGCGTTTAAACAAGAAACGTTCATACTTAAGTTGTGTTGTTATTGCCAATGGAAAGCTTATCGATGGTCAGGCTTCGTCTGACCCTAAAGCAAAGATATTTTCTCCTGCTGTGTTTTGCCGTCGGAGCGATCATTGCCTATCAGTTTACAAGGAATCGCCTTGAAGTAGAAAGAATGAGCCGTGTGGAGGGTCTGAGGGCCAACTCGTCTCAGTTCACTCTGGAGAGAAAACCCTTCCACATCCTGGGGGGGTCCATCCATTACTTCCGTGTCCCCAGAGCCTACTGGGAGGACCGGCTGCTAAAGATGAAGGCCTGTGGCCTCAATACTCTCACAACGTATGTGCCGTGGAACCTGCATGAGCCTGAGCGAGGGGTGTTCAACTTTGAGGATCAGTTGGATTTAGAAGCCTACCTCCGCCTTGCAGCCAGCTTGGGCCTCTGGGTGATTCTACGTCCAGGGCCGTACATCTGTGCTGAGTGGGATTTAGGGGGACTACCCAGttggCTGCTACGGGATCAAAACATGAAACTAAGAACAACCTACCCAGGATTCACTGCTGCAGTCAACTCCTTCTTTAATCAACTCATGAAGAAAGTTGTTCCACATCAGTACTCCAAGGGTGGCCCAATTATAGCAGTTCAAGTGGAGAATGAATATGGCTCCTTTGCTAAAGATGAAGATTACATGCCTTTCATCAAGGAGGCATTATTGTCAAGGGgcatcacagagctgctgctgaCCTCAGACAACAGGGAAGGACTAAAGCGTGGCGGAGTGAAAGGAGCACTAGAAACCATCAATTTCCAGAAACTCAACCCGAATGACATCAAGTGTCTGGATGGAATACAACCTAACAAGCCTAAGCTGGTGATGG
>XM_039788856.1
CTACAGGAGTACAGTCGGGTGTTTAGTGTTTACTTTTGGACAACTAACGTTAGGCTATACTAACGCTAGCTTCCCCTGACATCAGATACTGGTCACACTAGCTAGTTTAACATTCATTTTTCAtagacatgtttagttttttgaattAGTAATCCCGGAAGTAACGATACGAATAATTTAGCGTTGTGTACTTATGGGGTAGCTCAACTTCACTGGCGTTATCATATCATTTTTGCGAAACTGGAATAACGTTAGCCTATGTTAGATGTGACATAACCGTATACATTGAGATAACGGGATTCTAGTCCACATCGGAAAGAAAAAGATAACGTTATGTACTTTAAGTCGCGTTTAAACAAGAAACGTTCATACTTAAGTTGTGTTGTTATTGCCAATGGAAAGCTTATCGATGGTCAGGCTTCGTCTGACCCTAAAGCAAAGATATTTTCTCCTGCTGTGTTTTGCCGTCGGAGCGATCATTGCCTATCAGTTTACAAGGAATCGCCTTGAAGTAGAAAGAATGAGCCGTGTGGAGGGTCTGAGGGCCAACTCGTCTCAGTTCACTCTGGAGAGAAAACCCTTCCACATCCTGGGGGGGTCCATCCATTACTTCCGTGTCCCCAGAGCCTACTGGGAGGACCGGCTGCTAAAGATGAAGGCCTGTGGCCTCAATACTCTCACAACGTATGTGCCGTGGAACCTGCATGAGCCTGAGCGAGGGGTGTTCAACTTTGAGGATCAGTTGGATTTAGAAGCCTACCTCCGCCTTGCAGCCAGCTTGGGCCTCTGGGTGATTCTACGTCCAGGGCCGTACATCTGTGCTGAGTGGGATTTAGGGGGACTACCCAGttggCTGCTACGGGATCAAAACATGAAACTAAGAACAACCTACCCAGGATTCACTGCTGCAGTCAACTCCTTCTTTAATCAACTCATGAAGAAAGTTGTTCCACATCAGTACTCCAAGGGTGGCCCAATTATAGCAGTTCAAGTGGAGAATGAATATGGCTCCTTTGCTAAAGATGAAGATTACATGCCTTTCATCAAGGAGGCATTATTGTCAAGGGgcatcacagagctgctgctgaCCTCAGACAACAGGGAAGGACTAAAGCGTGGCGGAGTGAAAGGAGCACTAGAAACCATCAATTTCCAGAAACTCAACCCGAATGACATCAAGTGTCTGGATGGAATACAACCTAACAAGCCTAAGCTGGTGATGGGGTTGAATAGTGTGAAACCATTGGCAGGACTGCGTATCATGTCACCCACTTACGGTGGTGGAAAGATTCAGatccttaaaggtgctgtagACATGATACCTGTGGTCACAGAGATCCTTAAACTGGACATGTCTATCAACCTCTACATGTTCCACGGAGGGACAAATTTTGGCTTCATGAGTGGAGCGTTTGCTGTTGGAATGCCAGCACCTAGACCTATGGTCACAAGCTACGATTACGATGCTCCATTATCCGAGGCTGGGGATTACACCACCAAGTACCATCTTCTGAGGAATTTATTCAGCCACTACCACGCCCAGCCTCTACCTGAACTGCCCTCTCATCAGGAAAGGAGAGCGTACCAGCCTATTGTCATCCACCAGCACCTGTCTCTGTGGGACAGTCTGCATTTCACTGACAAGCCATTGAAGTCAGAGAGGCCGATGAACATGGAGAATCTCCCTGTCAACAATAACAATGGTCAGTCTTATGGCTATACACTGTATGAGACCACCATGACCAGCAAAGGAACCCTCAACTCAAAGAACAACATCAGAGACCGAGCACTGGTTTTTGTGGACAAACATTTTGTTGGTGTTCTGGATTATGAGACGCAAGAACTTCCACTCCCTGATGGGAAgGGAAAAAGAACTCTAAGTTTACTGGTTGAGAACTGTGGAAGAGTGAATTATGGGAAAACCCTGGATGACCAGCGCAAAGGTCTTGTGGGAGATATCGAGTTAAACAAGCGCCCCCTCAGTGACTTCATTATTCGCAGTCTGGATATGAAGCCAGGCTTTGTAAACAGACTTGAGAGTTCAGGCCACTGGATGTCTATGCGTCAGCGGCCCTCCTTCCCAGGGTTTTTCCAGGCCAGACTCTATGTGAACAGTTTTCCTAAAGACACTTTCATCAAGCTCCCTGGCTGGAGCAAAGGTGTAGTGTTTATCAACGGCAAGAATCTGGGTCGCTACTGGTCCATCGGTCCTCAGCAAACCCTCTACGTCCCAGGTCCCTGGCTTCACAAGGGGGACAACCAGGTCATAGTGTTTGAAGAGCAGGAAACAGATGGGAAGATTCAGTTTGCCAGCAGTCCGGACTATGGCATGACAGTTGATGTCCAGTGAGGACACGAGGCGAGAGGGGAGCGTGGATGAAGAGAGGAGGATGATGGGAGAGTAGCTGGGGAGAACACAATTGAGGCGATTGCCCCAAGCTTTGTATACTCAGGCACTGACACCCCCAGAAGTGGCACATGTCAGTCAGTGAACATGTTATTTTGTGTCCTATCAGAAGACACCAACACAGCAGTGTTACAGACCACTTTTTCATTTAGTGACTGTATTTATGAAATTCTTTAAATTCTTTTTGTTCAATTTAGTAACATTATCATTAACCTGCATTAAAACTTCATAATTGGAGACCATTGGACTTTGTTTGATTATAATAAAATGTTGTAAAATATCTTCCTCCCACagtattcatttttaaattgcaGGCTGTGTTAAAAGAACTGTAAATAAAGGCGGGTTCAACCTCTGTGTCATTAA

Function


NR:

description
PREDICTED: beta-galactosidase-1-like protein 2 isoform X1

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0004565 beta-galactosidase activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU25608 False 1219 TUCP 0.58 9 22001904 22007171
XM_039788856.1 True 2773 mRNA 0.46 20 21983302 22007175

Neighbor


gene id symbol gene type direction distance location
siae NA coding downstream 188358 21787540 ~ 21794944 (-)
mmp13b mmp13 coding downstream 225123 21754393 ~ 21758179 (-)
gucy2f LOC103357218,LOC100708779 coding downstream 251159 21720989 ~ 21732143 (-)
LOC120572601 NA coding downstream 372664 21608044 ~ 21610638 (-)
dhx40 dhx40 coding downstream 375562 21600529 ~ 21607740 (-)
srpra srpra coding upstream 37006 22044181 ~ 22053600 (-)
kcnj5 kcnj5 coding upstream 144162 22151337 ~ 22179661 (-)
fli1 fli1,LOC106612965,LOC103145351,LOC106905187 coding upstream 192959 22200134 ~ 22233779 (-)
smtla NA coding upstream 340136 22347311 ~ 22352582 (-)
LOC120551448 NA coding upstream 781869 22789044 ~ 22799012 (-)
G18669 NA non-coding downstream 104538 21819989 ~ 21878764 (-)
G18626 NA non-coding downstream 287580 21632980 ~ 21695722 (-)
G18631 samsn1,LOC102311369,LOC107374247 non-coding downstream 330436 21651703 ~ 21652866 (-)
G18591 NA non-coding downstream 399899 21527455 ~ 21583403 (-)
LOC120572042 NA non-coding downstream 450547 21529997 ~ 21532755 (-)
G18758 NA non-coding upstream 140864 22148039 ~ 22148297 (-)
G18770 NA non-coding upstream 181088 22188263 ~ 22188687 (-)
G18795 NA non-coding upstream 275828 22283003 ~ 22286209 (-)
G18803 NA non-coding upstream 357096 22364271 ~ 22364495 (-)
G18810 NA non-coding upstream 425378 22432553 ~ 22432962 (-)
gdpd5b gdpd5,LOC103357216 other downstream 272939 21664076 ~ 21710363 (-)
LOC120572205 NA other downstream 368056 21610814 ~ 21615246 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other downstream 721379 21237188 ~ 21261923 (-)
si:ch1073-340i21.1 NA other downstream 886101 21094177 ~ 21097201 (-)
LOC120547993 NA other downstream 1841764 20137072 ~ 20141538 (-)
G18885 gramd1b other upstream 1132038 23139213 ~ 23148515 (-)
G18948 LOC103474743 other upstream 1239428 23246603 ~ 23252420 (-)
LOC120574680 NA other upstream 1446372 23453547 ~ 23461044 (-)
atm atm,LOC102794456 other upstream 1722313 23729488 ~ 23758826 (-)
slc33a1 slc33a1 other upstream 1795340 23802515 ~ 23809452 (-)

Expression



Co-expression Network