Gene
RNA
| Item | Value |
|---|---|
| gene id | G18885 |
| gene name | gramd1b |
| gene type | unknown |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 23139213 ~ 23148515 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| gramd1b | Predicted to enable cholesterol binding activity; cholesterol transfer activity; and phospholipid binding activity. Predicted to be involved in cellular response to cholesterol and cholesterol homeostasis. Located in endoplasmic reticulum membrane; endoplasmic reticulum-plasma membrane contact site; and plasma membrane. |
| description |
|---|
| PREDICTED: GRAM domain-containing protein 1B isoform X11 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU25812 | True | 502 | TUCP | 0.43 | 3 | 23139213 | 23148515 |
| TU25813 | False | 493 | TUCP | 0.57 | 2 | 23139400 | 23148515 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rbm7 | rbm7,LOC104959492 | coding | downstream | 256760 | 22875065 ~ 22882453 (-) |
| barx2 | barx2 | coding | downstream | 267623 | 22860951 ~ 22871590 (-) |
| LOC120551448 | NA | coding | downstream | 340201 | 22789044 ~ 22799012 (-) |
| smtla | NA | coding | downstream | 786631 | 22347311 ~ 22352582 (-) |
| fli1 | fli1,LOC106612965,LOC103145351,LOC106905187 | coding | downstream | 905434 | 22200134 ~ 22233779 (-) |
| LOC120546095 | NA | coding | upstream | 10781 | 23159296 ~ 23162078 (-) |
| lbhl | LOC102301737,LOC102196385,LOC100690809,LOC103154600,LOC108238121,LOC106945137 | coding | upstream | 13687 | 23162202 ~ 23169207 (-) |
| cfap45 | NA | coding | upstream | 130087 | 23278602 ~ 23283802 (-) |
| trappc4 | trappc4 | coding | upstream | 140881 | 23289396 ~ 23291463 (-) |
| sacs | sacs | coding | upstream | 166543 | 23315058 ~ 23341092 (-) |
| G18883 | NA | non-coding | downstream | 954 | 23137650 ~ 23138259 (-) |
| G18868 | NA | non-coding | downstream | 18279 | 23044749 ~ 23120934 (-) |
| G18841 | NA | non-coding | downstream | 323233 | 22815781 ~ 22815980 (-) |
| LOC120572359 | NA | non-coding | downstream | 343574 | 22794426 ~ 22795639 (-) |
| G18837 | NA | non-coding | downstream | 359436 | 22777736 ~ 22779777 (-) |
| G18896 | NA | non-coding | upstream | 7426 | 23155941 ~ 23156504 (-) |
| G18905 | NA | non-coding | upstream | 26949 | 23175464 ~ 23175714 (-) |
| G18911 | polr2i,rpb9 | non-coding | upstream | 30121 | 23178636 ~ 23180583 (-) |
| G18923 | NA | non-coding | upstream | 47153 | 23195668 ~ 23196344 (-) |
| LOC120546850 | NA | non-coding | upstream | 68251 | 23216766 ~ 23234546 (-) |
| LOC120551419 | LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978 | other | downstream | 1132038 | 21983302 ~ 22007175 (-) |
| gdpd5b | gdpd5,LOC103357216 | other | downstream | 1428850 | 21664076 ~ 21710363 (-) |
| LOC120572205 | NA | other | downstream | 1523967 | 21610814 ~ 21615246 (-) |
| slc6a4a | slc6a4,LOC103359260,LOC108228506 | other | downstream | 1877290 | 21237188 ~ 21261923 (-) |
| si:ch1073-340i21.1 | NA | other | downstream | 2042012 | 21094177 ~ 21097201 (-) |
| G18948 | LOC103474743 | other | upstream | 98088 | 23246603 ~ 23252420 (-) |
| LOC120574680 | NA | other | upstream | 305032 | 23453547 ~ 23461044 (-) |
| atm | atm,LOC102794456 | other | upstream | 580973 | 23729488 ~ 23758826 (-) |
| slc33a1 | slc33a1 | other | upstream | 654000 | 23802515 ~ 23809452 (-) |
| G19140 | gmps,LOC102797084 | other | upstream | 675306 | 23823821 ~ 23827954 (-) |
