G18963 (rps25)


Basic Information

Item Value
gene id G18963
gene name rps25
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 23291741 ~ 23294502 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU25908
CTCCTTTCCTGTGCACAAGCACCAACTGAATAGTGTTGTGATCGAGCAACTTTGTTTTCCCATTTACAGAGCCAGGGCTGTGTTTGACCACTGACACATTTTTCACATAGTTGTAGAAGTGACAGAACCAGCAGGTAATCCAGTTACTGACACATGAACAGTAAACAAATACACAGCTGCGATTTTGTCTTTACAGTTTTtattcatcttttattacaaACAGCTCAGAGGAAACAGGAGAACCTGCAAGACAGGAAAAAAAGCTGCAGGTCAGTGGATGcagcaaaaacaaagacaaactcAGACAGATGTACAGTTTCTGTTGTACCTGATCATGCTTTCTCTGCTGCTTTCTCTGCTGCCGCCTCCTCATCACCACCCTTGGTGTTACGTGTGTAAATCAGCTGGGCTCTGTGTTTGGACACCAGTTTGATCATGCCTTGCTAAGCAGCTCCTGGAGGGCGTTCCTGGCCAGGGAGCCACGGATCTTCAGCCTCTCAGACACAACAGCGGGGGTGATGAGCTTGTAGTTTGGGACTTCTTTGTACAACTTTTCGTAGGTTGCCTTGTCGAAGAGGACCAGGTTGTTGAGCTTATCCCTTACTTTTCCCTTGGACCACTTCTTCTTCTTGGCTTTGCCTCCGGACTTGTTGACTGGGTCCTTGTCCTTCTTGGACTTCCCAGAGTCCTTCTTCTTATCCTGCTTGGGAGGCATGTTTCCTCGTCAAGATGT

Function

symbol description
rps25 Predicted to be a structural constituent of ribosome. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit. Orthologous to human RPS25 (ribosomal protein S25).

NR:

description
40S ribosomal protein S25

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25908 True 733 lncRNA 0.50 4 23291741 23294502

Neighbor

gene id symbol gene type direction distance location
trappc4 trappc4 coding downstream 278 23289396 ~ 23291463 (-)
cfap45 NA coding downstream 7939 23278602 ~ 23283802 (-)
lbhl LOC102301737,LOC102196385,LOC100690809,LOC103154600,LOC108238121,LOC106945137 coding downstream 122534 23162202 ~ 23169207 (-)
LOC120546095 NA coding downstream 129663 23159296 ~ 23162078 (-)
rbm7 rbm7,LOC104959492 coding downstream 409288 22875065 ~ 22882453 (-)
sacs sacs coding upstream 20556 23315058 ~ 23341092 (-)
LOC120554161 mipep coding upstream 82592 23377094 ~ 23409078 (-)
brwd1 NA coding upstream 115318 23409820 ~ 23446831 (-)
LOC120553253 NA coding upstream 154649 23449151 ~ 23452418 (-)
dscamb dscam,LOC103377590 coding upstream 280198 23574700 ~ 23693377 (-)
G18943 NA non-coding downstream 54895 23233513 ~ 23236846 (-)
LOC120546850 NA non-coding downstream 57195 23216766 ~ 23234546 (-)
G18923 NA non-coding downstream 95397 23195668 ~ 23196344 (-)
G18911 polr2i,rpb9 non-coding downstream 111158 23178636 ~ 23180583 (-)
G18905 NA non-coding downstream 116027 23175464 ~ 23175714 (-)
G19018 NA non-coding upstream 52935 23347437 ~ 23351424 (-)
G19033 NA non-coding upstream 170461 23464963 ~ 23471724 (-)
G19045 NA non-coding upstream 270501 23565003 ~ 23565242 (-)
G19126 NA non-coding upstream 490736 23785238 ~ 23787687 (-)
G19137 gmps,LOC102797084 non-coding upstream 523063 23817565 ~ 23818438 (-)
G18948 LOC103474743 other downstream 39321 23246603 ~ 23252420 (-)
G18885 gramd1b other downstream 143226 23139213 ~ 23148515 (-)
LOC120551419 LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978 other downstream 1284566 21983302 ~ 22007175 (-)
gdpd5b gdpd5,LOC103357216 other downstream 1581378 21664076 ~ 21710363 (-)
LOC120572205 NA other downstream 1676495 21610814 ~ 21615246 (-)
LOC120574680 NA other upstream 159045 23453547 ~ 23461044 (-)
atm atm,LOC102794456 other upstream 434986 23729488 ~ 23758826 (-)
slc33a1 slc33a1 other upstream 508013 23802515 ~ 23809452 (-)
G19140 gmps,LOC102797084 other upstream 529319 23823821 ~ 23827954 (-)
G19270 ptx3 other upstream 953529 24248031 ~ 24252913 (-)

Expression


Co-expression Network