LOC120574680


Basic Information

Item Value
gene id LOC120574680
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 23453547 ~ 23461044 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU25985
GGAACTCTGGTCCGTTTAGGGGACAAACATAGGCCTAgtctatattttttatatttggaatATCATTTTATATTGCAACTTTTCTATAAGAAGTGTTTCCGATTAACTTTGAGTTTttacaatagaaaaaaaattatttatttttatattattatttgagattctatagtaaaaataaataaataatcaaggtaaaagtaaaagtgtttACCAATTGTTCCgctggttaccatgacaacctTGACAGTGTCTTTACAAAAAAGGCCCACCCGTTGATAAAAGGATTTAGCGTTAAtgagcacctagctagctaaatatTTACAACTTGTACCGTCAGCAGTGAGcaacaggagagaaaagagcaAGACTATTTGCGAGGAAAGGTATGATGCTCTTATATTTTCAGGCTACATCaaatatgtgaaaaaaatcaaGTTAATGGTggagaaaatgttatttttgcaCCTCAGTCAAAGTCAGATTATAGGGACCAAAAAGAACGGTTGTTATTAAACAACCGTTCTTTTTGGTCCCTATATACACAACCAAATTGAATGACTGAAAGAAAACAATCAGAGATGTGGGCAGCAATTTAGAGGTCTGAATCCAGGCTAAGCACCTATTTTTGTACATTGCACAATTAATGTGTTCCACCTAGTGATAGGGTAACATGGTAAGTATCACAAAAGTCCATTCTTTGAAAGGTCttgtattataaattaaaccCATAAGAAATATTGATATAGTACATTAAGTAAATCTTTTGTTCATTTCAATTTTGgacatttcataaaaatacatttagagTACATGGGCTGTATAGTGGAGACTGGAAAAAATGGAAGACTTAGTGTGCagttaagaaaaagaaaataccaAAACAGAAACAATCTGAAACAGCGTTTGCTCTGCTGTACATGTGTATCATACTGAAATTCTGATTAGCCACTTCCTGTCTGTGCACAAGATAATCCTAAGGCTGAGGCTGAAGGACAGCAACAGGGAGCAGCTGTTACCACTGAATAATCAGTATGTTTTCCAAGACCTCCAGCTACTTCCTGCGGTTGGTAGTTTTAATGTGTGAATCTGCTGGCACAGGTGAAGTCACAATGTGTGCCTAAAAGTGACAGTGTATCACAACATATTTTCCCCTGAGTTTCTGAACCTATAGGGCTCAACAGTGACTGTCCACTTtttggaaccaagccaaccagctgcGAAATCAATCGTGACCATATAACATTTGATTCTGCGCAAAAGAACATTatgaaaacgacaaaaaaaggcaaaggtaaATGACTGTGTACAAAAACAATCATAAACTTCAGTGGTAGCCGTTCGCGAGTGCGGTAAACATTTCCAACTGTAACAGCAAGCTCCACCAATCCGTGACATcgctgttacgcttaggatGGTGGGTAGTGTAATACTTCTCCATCACGCTgcgaataaaacatgtttttcttaaaacaaggttgatatCATACAGACATCTTGCCTCTACAGGGGCATAAACCTTCGCAGCTCGTGTTAagtctaccttggatggtttagacatcatagaaaataatcaaaatccttatggagaaaatgaatgggatttttacctccggaaccacactgttgaacTCTATATGGGGTGGAATAAATAACAGGAACACAATTTGTTTTGACTGTCACAGAAATTTAAAAAGTTATAGATTGTAGTGTTGCGGTTTGTGGATGTTCCTGATGTTGTGAATCTAATGCATTACAACGTCAAAGCTGTACTGCATTGTAATTGAAGCTTCTCAAAGGCTGTCTGTTACTCTTGCATTGGACTTCATTTTGGGTCTTTGTCAGTCACATTGTGTATGCTAGTATGTCAGTCGCAGTAACTACTTTAGTCTTTCACCGTGTGTTTTCAGCTTGTCTGTCATCTTGTTGATTTTGCGCTCCAATCTGGCATATCTAGCAAACTCATCCATCATGCTAATCGAGGCCTgctccttcttcatttcctgGATTTCAGCCCTCATCTCACTCTCCTGCTCAGCATCTTTCTGCACCAGCTTTGAGAGCtttaaagaagaaaacacaCTATTACTGGGAAATCAGAAAGACAGAGTTTAAC
>XM_039825032.1
aaaagtaaaagtgtttACCAATTGTTCCgctggttaccatgacaacctTGACAGTGTCTTTACAAAAAAGGCCCACCCGTTGATAAAAGGATTTAGCGTTAAtgagcacctagctagctaaatatTTACAACTTGTACCGTCAGCAGTGAGcaacaggagagaaaagagcaAGACTATTTGCGAGGAAAGAGTGGAGAAGACTATAAAGAAGTGATGAGTGTGAGGCGGCAGGGCGTGTTGCAGCAGGCCTTTGCTCACAGGGAGGGAGATGGTGATGCTGTGAGCTGCAGCACTGACACCTCTAGGTGGTCCTCTCCCCCCAGAGAGTGCTGTGGCTCTAATAGCTCACACTACTCATCTGACTTTGAAGACCAGGCTGACTCACTTACAGACAAGAACCCAGAAGTCAAGACATCAGACAAGCAGCAGGCATCAAAAACATGCGGAAGAAAAAAAGgtAAAAAAGCACAAGGGCCCCACAAGTATAAGACAAACAACAGTGCAAACCGGCAAGTCCTGAAGTTGCCGCCGATCAAGCCCATGCAGGTTTCAAAGTCTGCCGACTTGAACTGCATCAGGGAGCTGAAGAGCCAGGTGTGgcatctgcagcagcagctgggcGAAGCCAGGACTGAGAACAAGCTGCTGAAGAGGCTCCAGCTTCGCCACACGGTGGCACTGCAGCACTTCCAAGACTCTGAGGGCAGCCTCTCACAGATCCTCACCAAGCACAGCAACGAGGTCCGAGTCCTGCAGGGGTTGCTCCGTGAGACCCGTGCCTGCCGTGACAATCTGGCAAGGCAGCTAAAAACCACAGAAAATAAGTTGTTAAGCGCAAAGGCCAGTCTCCAGCACCTGCAGCTGCTCAGCCAGGATCACAGCCTGCTGGAGAGGGAGGAACTCACTTTCAGACTGACCAGGGCCTATGCAGAGCTAGAGGACAAGGACAAGAGGATATTGGACTTGGAGAAGAATGTTGAGTTGTGCCAAGCCTCATTCAATCGCCAAATGGTCACTGAACAAAGAAAGATCAAGGAGGCGAGAAAGATATCCTGCTATCTGCAAGAGCAAATATATCAGCTGAACAAGGAAATTCAAGATGGCAAGAGAAAACTGGAAACACACAATATTTACTCCAACAGATCTTCCAAAAAAGGCAGTGAAAGCAAGGAGGTTCAAACAGATGGATTAGTCCTTCTCCCGACTGCGGCTGCAAGTGTTTTGGAGTTAGAATATATGACTGAAGAAAGGCTGGAGGAGCAAGAGAGCTCTGTGAACTGGTGTTGTCACAATCCAGTGCAGGAGTCTTTGGTAATAGAAAAGCCAGAGACAGAGGTTCCTGCAAATGTCACATTAGAAGAGAATCGCCAAGAGTGTACTGAGACATGTGCAGACACCAGTGAGCATTGTGGTTCTTCAGAAGAGAGCCCAGAATATCAAACTGAGGAAGAaagtgacaaagaaaaagaggcATCAGAGGCCCCACGGGTGTTAGAAGAGCTAAAAACAGAGGAACATGAGAGTGAAACGTCATACATAGAAAAGTCTCTAAATGCAACTAAACCCAAAAGAAAAGGATACAAGCTCCCCAAAATCAGACACAACTACACCTATAAACAATCTATTGAGAACCTGCACAGCGGAAGACCTGCCTACAGCAGTGTGGACTTGAGTCCCTGTCAAAGTGCCAAGAGCCCGATCAAGTTGGAGACCCTCAGCAGTGGTATTCATGATCTTTGTCTACAAACTGAGAAATCCAGGAGAGATGGAGTCTGCAGCCCTCAGGACGAGTAAAGGGCATTCAAAAAACACATAGCAAGCTGATGAGGAACTCTTTGGACCGAGTAAAGTCACTGATTTAGTGACTATACGGAAGAACACAGCTGAGGTCAACAATGTCATCTTTACTAAAAGTGGATGAGGGAATTGTTTTCTGTAGTGGAAACAGAGTTTCTCATACTGAAGTATTTCTCTGAATGAATGATTGTTTGACCAAGAGCTACACACAGATCCATTGTAATCTATCTACTTTGTTTTAATTCTTTACAACTTTACTACAAGAAAATCTACCCAACTTGTTCTTGCTTGTGAATTCCCAACTTATAACATTTGAATAAATAGAAgcttata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25985 False 2113 lncRNA 0.55 2 23453547 23461044
XM_039825032.1 True 2131 mRNA 0.46 9 23456795 23460851

Neighbor

gene id symbol gene type direction distance location
LOC120553253 NA coding downstream 1129 23449151 ~ 23452418 (-)
brwd1 NA coding downstream 6716 23409820 ~ 23446831 (-)
LOC120554161 mipep coding downstream 44469 23377094 ~ 23409078 (-)
sacs sacs coding downstream 112455 23315058 ~ 23341092 (-)
trappc4 trappc4 coding downstream 162084 23289396 ~ 23291463 (-)
dscamb dscam,LOC103377590 coding upstream 113656 23574700 ~ 23693377 (-)
tubd1 tubd1,LOC102795212 coding upstream 327735 23788779 ~ 23792976 (-)
ssr3 ssr3,LOC106581450 coding upstream 499710 23960754 ~ 23964467 (-)
veph1 veph1,LOC106613251 coding upstream 730427 24191471 ~ 24281835 (-)
LOC120551456 LOC102079500,LOC107380520,LOC101465397 coding upstream 866422 24327466 ~ 24331196 (-)
G19018 NA non-coding downstream 102123 23347437 ~ 23351424 (-)
G18963 rps25 non-coding downstream 159045 23291741 ~ 23294502 (-)
G18943 NA non-coding downstream 216701 23233513 ~ 23236846 (-)
LOC120546850 NA non-coding downstream 219001 23216766 ~ 23234546 (-)
G18923 NA non-coding downstream 257203 23195668 ~ 23196344 (-)
G19033 NA non-coding upstream 3919 23464963 ~ 23471724 (-)
G19045 NA non-coding upstream 103959 23565003 ~ 23565242 (-)
G19126 NA non-coding upstream 324194 23785238 ~ 23787687 (-)
G19137 gmps,LOC102797084 non-coding upstream 356521 23817565 ~ 23818438 (-)
G19158 NA non-coding upstream 523027 23984071 ~ 23984458 (-)
G18948 LOC103474743 other downstream 201127 23246603 ~ 23252420 (-)
G18885 gramd1b other downstream 305032 23139213 ~ 23148515 (-)
LOC120551419 LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978 other downstream 1446372 21983302 ~ 22007175 (-)
gdpd5b gdpd5,LOC103357216 other downstream 1743184 21664076 ~ 21710363 (-)
LOC120572205 NA other downstream 1838301 21610814 ~ 21615246 (-)
atm atm,LOC102794456 other upstream 268444 23729488 ~ 23758826 (-)
slc33a1 slc33a1 other upstream 341471 23802515 ~ 23809452 (-)
G19140 gmps,LOC102797084 other upstream 362777 23823821 ~ 23827954 (-)
G19270 ptx3 other upstream 786987 24248031 ~ 24252913 (-)
trip12 trip12 other upstream 2580251 26041295 ~ 26089702 (-)

Expression


Co-expression Network