G19033


Basic Information

Item Value
gene id G19033
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 23464963 ~ 23471724 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU25999
GTCAGCTGGCTTTAACTACTCAGTCTCTTCctcCTCTTGTACTTcagcctcttcttcttcctgttcttcctcctcctctgcctggGCCTGTGTGTCTTCTGTGACCTCGTCTGTTTCTTCCACTGCCTGGTCCTCCTTTGCGGGGGCCTCGTCTCCTGCTGTTTCTCCTTCCGTGGCTTCATCATCTGCAGTCTCTCCTTCTgctacctcctcctcctcctcctcaccaccctcaccttcctcctcctcatcagctGCCTGCTCCTCATCTCCGTGTGCATCCCCATTACGCTCCTCCACTGGAACCTCCTTATTGTGAGGTGAAAACAAATGAtgtgattaaaagaaaaaaaacactaatattGGAATAGTTGTTCAGGCACTGTTTCAACAGCACAAAGATGGCCAGCTGATCAGTTGGAGAGATTCAGAAACTTAAATGTTAGGTGTTATTCAATCCTGGGAATAAAGTGGAGGAGGGGAAGAAGTAGTAGAAGTTAAAAGGTATCAGTACATTCTTTATAAAAATCTAAAGTTTGGAATGATGCATCGAGGATTGAAGACAGCCTTTTTGTCACATGTGAGAATCAGGCATggccttaaaggaatagtttgacaataGTTTGTTATGTGGTGCCAGACtattacagattaaacaaacgagAGGTTTAGAGAGGtgtagaggtgctggtaggctgaTATTGTTATCTCTGGACAtagccaagctagctgtttccacctgtttccagtctttgtgctaagctaagctcaAAGGCTTTGCAGGC
>TU26000
cCTCTTGTACTTcagcctcttcttcttcctgttcttcctcctcctctgcctggGCCTGTGTGTCTTCTGTGACCTCGTCTGTTTCTTCCACTGCCTGGTCCTCCTTTGCGGGGGCCTCGTCTCCTGCTGTTTCTCCTTCCGTGGCTTCATCATCTGCAGTCTCTCCTTCTgctacctcctcctcctcctcctcaccaccctcaccttcctcctcctcatcagctGCCTGCTCCTCATCTCCGTGTGCATCCCCATTACGCTCCTCCACTGGAACCTCCTTATTGTGAGGTGAAAACAAATGAtgtgattaaaagaaaaaaaacactaatattGGAATAGTTGTTCAGGCACTGTTTCAACAGCACAAAGATGGCCAGCTGATCAGTTGGAGAGATTCAGAAACTTAAATGTTAGGTGTTATTCAATCCTGGGAATAAAGTGGAGGAGGGGAAGAAGTAGTAGAAGTTAAAAGGTATCAGTACATTCTTTATAAAAATCTAAAGTTTGGAATGATGCATCGAGGATTGAAGACAGCCTTTTTGTCACATGTGAGAATCAGGCATggccttaaaggaatagtttgacaataGTTTGTTATGTGGTGCCAGACtattacagattaaacaaacgagAGGTTTAGAGAGGtgtagaggtgctggtaggctgaTATTGTTATCTCTGGACAtagccaagctagctgtttccacctgtttccagtctttgtgctaagctaagctcaAAGGCTTTGCAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25999 True 785 lncRNA 0.50 4 23464963 23471724
TU26000 False 753 lncRNA 0.45 3 23464963 23469720

Neighbor

gene id symbol gene type direction distance location
LOC120553253 NA coding downstream 12545 23449151 ~ 23452418 (-)
brwd1 NA coding downstream 18132 23409820 ~ 23446831 (-)
LOC120554161 mipep coding downstream 55885 23377094 ~ 23409078 (-)
sacs sacs coding downstream 123871 23315058 ~ 23341092 (-)
trappc4 trappc4 coding downstream 173500 23289396 ~ 23291463 (-)
dscamb dscam,LOC103377590 coding upstream 102976 23574700 ~ 23693377 (-)
tubd1 tubd1,LOC102795212 coding upstream 317055 23788779 ~ 23792976 (-)
ssr3 ssr3,LOC106581450 coding upstream 489030 23960754 ~ 23964467 (-)
veph1 veph1,LOC106613251 coding upstream 719747 24191471 ~ 24281835 (-)
LOC120551456 LOC102079500,LOC107380520,LOC101465397 coding upstream 855742 24327466 ~ 24331196 (-)
G19018 NA non-coding downstream 113539 23347437 ~ 23351424 (-)
G18963 rps25 non-coding downstream 170461 23291741 ~ 23294502 (-)
G18943 NA non-coding downstream 228117 23233513 ~ 23236846 (-)
LOC120546850 NA non-coding downstream 230417 23216766 ~ 23234546 (-)
G18923 NA non-coding downstream 268619 23195668 ~ 23196344 (-)
G19045 NA non-coding upstream 93279 23565003 ~ 23565242 (-)
G19126 NA non-coding upstream 313514 23785238 ~ 23787687 (-)
G19137 gmps,LOC102797084 non-coding upstream 345841 23817565 ~ 23818438 (-)
G19158 NA non-coding upstream 512347 23984071 ~ 23984458 (-)
G19189 NA non-coding upstream 554494 24026218 ~ 24026684 (-)
LOC120574680 NA other downstream 3919 23453547 ~ 23461044 (-)
G18948 LOC103474743 other downstream 212543 23246603 ~ 23252420 (-)
G18885 gramd1b other downstream 316448 23139213 ~ 23148515 (-)
LOC120551419 LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978 other downstream 1457788 21983302 ~ 22007175 (-)
gdpd5b gdpd5,LOC103357216 other downstream 1754600 21664076 ~ 21710363 (-)
atm atm,LOC102794456 other upstream 257764 23729488 ~ 23758826 (-)
slc33a1 slc33a1 other upstream 330791 23802515 ~ 23809452 (-)
G19140 gmps,LOC102797084 other upstream 352097 23823821 ~ 23827954 (-)
G19270 ptx3 other upstream 776307 24248031 ~ 24252913 (-)
trip12 trip12 other upstream 2569571 26041295 ~ 26089702 (-)

Expression


Co-expression Network