G19137 (gmps,LOC102797084)


Basic Information

Item Value
gene id G19137
gene name gmps,LOC102797084
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 23817565 ~ 23818438 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU26139
CCAGTACTCACTTTGACAAATGTATCTCCAATgattttccttttctcttctgGGTTGGTAGTCATATTCAAAGTCTTGCTGATGCGTTTTCGTGGCGTCCTGTCCTCCTCAGAGATGGGGAGGGTTGTCGTTCCATTGTAGAAGGTGTGAGCTGCATTTACCACTTTGAGTTTGATGCCCAGCTTGGTGAGGGCCTCCTCCAcactctgactctctctcttcctcatgAAGCCGTTGTCGATGTGAACTGCTATCACCTGGTCCTGGTTAAGAGCTTTGTTAAGGAGAGCTGTGCAAACTGTTGAGTCTACCCCACCACTCAGCAGCACCTGAAAAAAATCATTACAGTCAGTCATTAACTGTGCAGCCAGATAGTTGAGTAGTGACATCCAACCGCTTTAGAGATAAATTTGTGACCCTGCTAGATTAAGGAGGAAGTATTAAAACCCTTGCACTTACTCTTTCTTGCTCTCTAATCAGCTGTATGTCTAATTTCTATTCATGTTAGCCTCCCAATGTATTAGTCATGTTGTATTTGATATATCTGGGGTTTTTTTTCT

Function

symbol description
gmps Predicted to enable GMP synthase activity. Predicted to be involved in GMP biosynthetic process. Predicted to act upstream of or within glutamine metabolic process and purine nucleotide biosynthetic process. Predicted to be active in cytosol. Is expressed in several structures, including alar plate midbrain region; digestive system; eye; midbrain; and segmental plate. Orthologous to human GMPS (guanine monophosphate synthase).

NR:

description
PREDICTED: GMP synthase [glutamine-hydrolyzing]-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26139 True 560 lncRNA 0.43 2 23817565 23818438

Neighbor

gene id symbol gene type direction distance location
tubd1 tubd1,LOC102795212 coding downstream 24589 23788779 ~ 23792976 (-)
dscamb dscam,LOC103377590 coding downstream 124188 23574700 ~ 23693377 (-)
LOC120553253 NA coding downstream 365147 23449151 ~ 23452418 (-)
brwd1 NA coding downstream 370734 23409820 ~ 23446831 (-)
LOC120554161 mipep coding downstream 408487 23377094 ~ 23409078 (-)
ssr3 ssr3,LOC106581450 coding upstream 142316 23960754 ~ 23964467 (-)
veph1 veph1,LOC106613251 coding upstream 373033 24191471 ~ 24281835 (-)
LOC120551456 LOC102079500,LOC107380520,LOC101465397 coding upstream 509028 24327466 ~ 24331196 (-)
serpini1 serpini1 coding upstream 517619 24336057 ~ 24355496 (-)
si si,LOC107380514 coding upstream 1006585 24825023 ~ 24921452 (-)
G19126 NA non-coding downstream 29878 23785238 ~ 23787687 (-)
G19045 NA non-coding downstream 252323 23565003 ~ 23565242 (-)
G19033 NA non-coding downstream 345841 23464963 ~ 23471724 (-)
G19018 NA non-coding downstream 466141 23347437 ~ 23351424 (-)
G18963 rps25 non-coding downstream 523063 23291741 ~ 23294502 (-)
G19158 NA non-coding upstream 165633 23984071 ~ 23984458 (-)
G19189 NA non-coding upstream 207780 24026218 ~ 24026684 (-)
G19191 NA non-coding upstream 210189 24028627 ~ 24031253 (-)
G19224 NA non-coding upstream 346640 24165078 ~ 24165298 (-)
G19264 ccnl1 non-coding upstream 352323 24170761 ~ 24178876 (-)
slc33a1 slc33a1 other downstream 8113 23802515 ~ 23809452 (-)
atm atm,LOC102794456 other downstream 58739 23729488 ~ 23758826 (-)
LOC120574680 NA other downstream 356521 23453547 ~ 23461044 (-)
G18948 LOC103474743 other downstream 565145 23246603 ~ 23252420 (-)
G18885 gramd1b other downstream 669050 23139213 ~ 23148515 (-)
G19140 gmps,LOC102797084 other upstream 5383 23823821 ~ 23827954 (-)
G19270 ptx3 other upstream 429593 24248031 ~ 24252913 (-)
trip12 trip12 other upstream 2222857 26041295 ~ 26089702 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other upstream 2488626 26307064 ~ 26334719 (-)
LOC120570434 fam124b other upstream 2615843 26434281 ~ 26445935 (-)

Expression


Co-expression Network