G19140 (gmps,LOC102797084)


Basic Information

Item Value
gene id G19140
gene name gmps,LOC102797084
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 23823821 ~ 23827954 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU26143
AAAGCTCAGTTTTCCATTGTACAAATGTCATCATAGTTGAAACTGCATGCAGTGGCTTAATTTGAGGCACGTTACTAAGGAGAATGGGCAttgaacaaacatttaaaataaaaaataaaaataaaaaaaaaacattaaattgcaTAACTTAATCTTATTGATATTGCAATTAAATTCAACTACAAAAGTATGTGTCCAATTTTATTAAGTTGTTTTTCTGTGGAGACATGTAACAGAAAATACACGTATTAAATGCAGAACAGAGGGAGAAACACTTATAGCAGTTAAGACAAGTTAGGAAAACAATTCATTTTGCATTAAGAGTATTTTTGCCACTAAAGCTTAAGGAGATAACAGAGGATGAGGCACAAAGACAAATACTGGAGGCATGAGAACCACCGCGTCCAAGTGAAATGTCTCTATCGGGGTACAATACGTTTTTAAATCTCAGTTAAACCTGAGCACTGTATTCACTGAGGTCTAAACCACGAGAGACACTAGAGAGTATGATGCACTGCATGTTTTGAGATCAGAAAAATGAAGCATCAAATGCCTTTTTGAGACAAAGTGAAGTTACGTTAGAGATGCCAACAGACAGTGCTCTTAAACTGACGTTTAACACTACAGAGATATGggtgaaaaactaaaaagacaACGTGCAAAAATGTACCACTGCACAACAAAAGAACAGCCAAATAATGATGAAATGACAACAGCAATTTACAGAATGTGGTTATAACTCTACCGTGCTTATAATTTTGTCATTAGTTAGTCCTCCCGTCATGTTTATTCTTCATAAAAAGCTTACATATTGCAGCATGAGGAGAAACGATGTTATATCCTCCTTTCTGGAAACATTAAAGTCCAGGTCAGGTCACACCAACGAAATAAACAAAATCAATAGAACAGGCACATACAAAGTTACCCATCATATTGGCCTCCTGCACACTAGTCATCATACTGAAGCTAATCTTGGTTTGACTGCTGTCCACaatgtgctacagcagcaagtCAAGAGCTCTGGTCAACAAATGTAGCTTGGAGAAGATCGTCAGATGAACCCACAATGTTATATATCAACACAGCATATATTCTACTTTTGGCAAAACAAAAAGCTTAAAAATTGATTGGTCACATTGGTtgcatttttagtttttagtttaaaaacagGCAACCTTCTTCATAGCACAGTATACAggcagaaagtgaaaatggacaaatagagaGAATAGTATTCTGACCTACAACAGTGAAACAAAAAACATCTGACAAAAAAGGCAGGAAAACAATTGCTGAAACTCTCCTTCTGttcttttcatgacttttgtttgcttgtttttatgtttagcTCGTCCCATAATGCAACCTGAGGCACAACATGAAAGTCTACTTTCTGAACTTTCACAGCTTCTTACTGCTCGCCTTTAATGGTTGACCttacaaaaaaaaggaagcagCAATTTATCTTTTCATCATAAGAGAGGAAATACATTGATGTACATGGATCAAAAATGACAATATATTACCAATAACCAACATTAATCAATCCATATTGCCAAAAATATTAAGACCAGGGAGGAGTGGTAGGGAGAGCAGAGTAGTAGCGCCTTTGCATGTGCGCCCGTCACAGTACGGTCTGCCTTCCGTGGGAATGTTGAAGAGAGGGGTGGAGGTACATGAGGGAGGGTCGGGGGTGAGGAAAAGTAGGGAGATAGGAAGGACAGACAAGGAGAGGAGTTCACCAGCCCTCTCGGATATCTGTcgagtgtgtttgtgcattgtgtgtgaGTCCCATCGATACGACATCATGTTGGGTTTTATTCCCACTCTGTGGTGCCAGGCGGTTTGGAGGTCAGATCATACATGACTCTGGAGATGCCTGGGATCTTCTTGATCTCATTCACCATCTTCAGCACCACCTCCTCTGGGATATGGTTGCCCGGCGTGGCGGGGATGCCGGTCATGAAATCGCTGGTGATGAAGGTGCGGACCACCACAGAGCGTCGGCAGGATGGCTGCTTTTGCAGTGGGTCACGGTCAAAGTGCAGGGGGGTCAGGATGACCGGCATCTGGCTGATCTTACCGGAATAGCcagACTCTCGAAGGATAGAGTGAGCTACAAAGTCAGCCTGTCTGAGCGTGCTCAGAACACCTGTGGTCAGGAAAGTTGGGGTAATGTCTGTTGGCGGCTCTTTCATGTGGGacccaaacacatacacaactCTGTTGATGCTATGGCACATGCGAGGGATGAGTCTAGCCAGGAACATGAGAGATTCCCAGTGTGGAG

Function

symbol description
gmps Predicted to enable GMP synthase activity. Predicted to be involved in GMP biosynthetic process. Predicted to act upstream of or within glutamine metabolic process and purine nucleotide biosynthetic process. Predicted to be active in cytosol. Is expressed in several structures, including alar plate midbrain region; digestive system; eye; midbrain; and segmental plate. Orthologous to human GMPS (guanine monophosphate synthase).

NR:

description
PREDICTED: GMP synthase [glutamine-hydrolyzing]

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26143 True 2290 TUCP 0.41 4 23823821 23827954

Neighbor

gene id symbol gene type direction distance location
tubd1 tubd1,LOC102795212 coding downstream 30845 23788779 ~ 23792976 (-)
dscamb dscam,LOC103377590 coding downstream 130444 23574700 ~ 23693377 (-)
LOC120553253 NA coding downstream 371403 23449151 ~ 23452418 (-)
brwd1 NA coding downstream 376990 23409820 ~ 23446831 (-)
LOC120554161 mipep coding downstream 414743 23377094 ~ 23409078 (-)
ssr3 ssr3,LOC106581450 coding upstream 132800 23960754 ~ 23964467 (-)
veph1 veph1,LOC106613251 coding upstream 363517 24191471 ~ 24281835 (-)
LOC120551456 LOC102079500,LOC107380520,LOC101465397 coding upstream 499512 24327466 ~ 24331196 (-)
serpini1 serpini1 coding upstream 508103 24336057 ~ 24355496 (-)
si si,LOC107380514 coding upstream 997069 24825023 ~ 24921452 (-)
G19137 gmps,LOC102797084 non-coding downstream 5383 23817565 ~ 23818438 (-)
G19126 NA non-coding downstream 36134 23785238 ~ 23787687 (-)
G19045 NA non-coding downstream 258579 23565003 ~ 23565242 (-)
G19033 NA non-coding downstream 352097 23464963 ~ 23471724 (-)
G19018 NA non-coding downstream 472397 23347437 ~ 23351424 (-)
G19158 NA non-coding upstream 156117 23984071 ~ 23984458 (-)
G19189 NA non-coding upstream 198264 24026218 ~ 24026684 (-)
G19191 NA non-coding upstream 200673 24028627 ~ 24031253 (-)
G19224 NA non-coding upstream 337124 24165078 ~ 24165298 (-)
G19264 ccnl1 non-coding upstream 342807 24170761 ~ 24178876 (-)
slc33a1 slc33a1 other downstream 14369 23802515 ~ 23809452 (-)
atm atm,LOC102794456 other downstream 64995 23729488 ~ 23758826 (-)
LOC120574680 NA other downstream 362777 23453547 ~ 23461044 (-)
G18948 LOC103474743 other downstream 571401 23246603 ~ 23252420 (-)
G18885 gramd1b other downstream 675306 23139213 ~ 23148515 (-)
G19270 ptx3 other upstream 420077 24248031 ~ 24252913 (-)
trip12 trip12 other upstream 2213341 26041295 ~ 26089702 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other upstream 2479110 26307064 ~ 26334719 (-)
LOC120570434 fam124b other upstream 2606327 26434281 ~ 26445935 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other upstream 2623426 26451380 ~ 26469896 (-)

Expression


Co-expression Network