G19551


Basic Information

Item Value
gene id G19551
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 26124237 ~ 26128420 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU26656
aaaaaaaaacatcccatgAAGTCTTCAAACAAATTGTTTATTGTACTCATGCGCTGTGACTGACAGAACCGATGTAAGGTGACGGGCAGGAAGAAAAGCTTGGTTTTGCAATTTTACGGCTGTAAATCGAAGAGAAAATTTGATATTGTTGTCGTGCTTGAAGCAGACCCTGAAATCATATTTTTGTCCTGGCATTAACCTGGACTTTTTCCCTCGCTTCTGTAATTAATATTAAGTGCTCAGAAACACACATCAGATGTGTGAGTTGACTACTACCACCTTGATTGATGTTTTTCATCTGATCGTTTAAAGCACATCCCTTTCAGTTTGGTAATATTATATGAGATAGTCAACCGCTACCAGGCCACTGCACGCGTTTCCACATGCATCTCATCCACATGCTGACAAGGACTGTTTATTTTAGAGACAATGtgcagacacagagaaacaaatGGAAAGAAATCCCTtattaaaagcagataaaagcATAATTTTGTGACCAAGTGAATGGAATTTAAACCCCAAAACATGTTCACCTAATCATCTTCATATGAATAGGAGCAAACAACCAGAAGACATCAACCACTAGTTTACTGGCTCTTATTAAACTGGCAATGGAGTTGACATGCAAGCTTATACACCATATAACAATAACTTTATGCTGCGATTGGTTAGGGTCCACATATTGCTGTTGAAATTTGGTCCAGtcatcctttttttcccccaacctTGTCCAACTGAAAACCTTTCACAAGCATAGGCAAAGTTCATCCAATGATCAATGTCTTAATTAAAATCAATCATTTTACAGTTGTATTTTGGCTCTGATTAGGCAGTTCATTCACTTCCAACCTGCGTGTGGACTTAGTCAGTACCAGCTGCAGCTCTGTGGGACGTTACACACAATATTCACTTCAGTAGCACTGCGTTAAGCTATCAACAAGTGGAGGTTTGGCAGCAGCTACAACCACATACAGTCAGTAAAGGGAACAACTCtgggacaaaaacaaaagcctCAAAGAAGCTCTGCAGACAAAGAACAAGGTACCGTACCAGTATAGCAACACATTAAAtcggtgtttaaaaaaaaaacaaaagatacaaaaacattttcctagaaaaataaattgttaaatacACAATACATGCATGTTAGAAATATATGACAgaccaaacacaaacaaaaattaTTTCCacaggcaaaataaaatacacgGTTAACCCTGTATTATCAGCATTACATGTTCAACTTTTGTTGTTAAAATATATTCAAgtttcttttgtatcttttcaaCACTTCATTGTTCAAATGGGCAAATgatggaaaacaataaaaagtaatCCAGGATTGAATCACAAGTTTGATTGTTCAGTTTTCTCCAGCGCAAAAATGATTTGTTGATTAATCAATAAGTCGaccaacagaaaaataaatcagtAAAAACGTAAAAACATTTGCTGGTTAGATCTTAAAATTTGGGGAGGATTTGGTTGCTTGTATCAGCTTCATATAATTAATTGAATTCTGTTCGACCATAGGGGCTGATAACTTGTGATGAGCATTTATAAAACAGCTGATAGACTATTTTATATTACTGTATTGATCAGATATGATTgttaggataaaaaaaaaaattctaggATATGAGTCACACCAGGAACATGATGATGTGCATCATTTTTAAcgaatgtatctttttttttttcttcttttttttttaaaaaaagacagacttTTGAATATTTTGGCAGTGGAGTGCTGCGACTAACTTTGTAAATAACTTAACTCTAAACCACAGAGTGCCACATCTTAAACAGATTCTCTTAAACCATTAAGTACACCAGCTGGAGTTGCtggtttgaaaaataaaacaaaaatgtgtttgttggtTGCCGTGATTGTCTGGACTAATTCTAATTTGTTATTCTGATGGATTCCTCTCTGCATTTCCTCCATCATTTCTTACATAAGCCACtacagtgtatgtatgtatgttgcgATGCTCTCAACATGACAGCACAGATCTAATGTACACCGTACCAGTACGATTCACAATCACAGGGACACAATCATGTGCCATCAGGATTCCAAACTGAACGCAGCATGCTCGCCTTAAGTCACTAAAACGTAAAAGAGTATGTTagcaaaaacataaacaaaaaactaatttttgatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatccatttttaaaacactaagaaggctcgacacaacatgaaactttgctcgaagtatcaccaggggctctacaccttaacgaatgcattgacaacattgtttgtgtacccaaaatttactaaaaagaaggttttgaacaactcactgtagctcttgttgtttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26656 True 2384 lncRNA 0.36 2 26124237 26128420

Neighbor

gene id symbol gene type direction distance location
dner dner coding downstream 85679 25986594 ~ 26038558 (-)
pid1 pid1,LOC102785909 coding downstream 142022 25950551 ~ 25982215 (-)
LOC120546637 sphkap coding downstream 234685 25756303 ~ 25889552 (-)
slc19a3b LOC100700720,LOC104945055 coding downstream 377057 25742506 ~ 25747180 (-)
slc19a3a LOC103366725 coding downstream 382502 25738490 ~ 25741735 (-)
LOC120572189 LOC103357875,LOC102300835,LOC102196867,LOC101475975 coding upstream 7394 26135814 ~ 26156545 (-)
baz1b baz1b,LOC102789732 coding upstream 114461 26242881 ~ 26259016 (-)
bcl7bb bcl7b,LOC102791254 coding upstream 131026 26259446 ~ 26261795 (-)
gdpd1 gdpd1 coding upstream 209131 26337551 ~ 26348184 (-)
LOC120574272 pde2a coding upstream 343220 26471640 ~ 26663398 (-)
G19466 NA non-coding downstream 393122 25721493 ~ 25731115 (-)
G19438 NA non-coding downstream 457008 25622986 ~ 25667229 (-)
G19412 NA non-coding downstream 657731 25430426 ~ 25466506 (-)
G19401 NA non-coding downstream 710715 25413195 ~ 25413522 (-)
G19399 NA non-coding downstream 768505 25355522 ~ 25355732 (-)
G19566 rnf7 non-coding upstream 40254 26168674 ~ 26170568 (-)
G19663 hip1 non-coding upstream 168079 26296499 ~ 26300091 (-)
G19660 NA non-coding upstream 179317 26307737 ~ 26310671 (-)
G19665 NA non-coding upstream 183197 26311617 ~ 26412574 (-)
G19685 NA non-coding upstream 278868 26407288 ~ 26408748 (-)
trip12 trip12 other downstream 34535 26041295 ~ 26089702 (-)
G19270 ptx3 other downstream 1871324 24248031 ~ 24252913 (-)
G19140 gmps,LOC102797084 other downstream 2296283 23823821 ~ 23827954 (-)
slc33a1 slc33a1 other downstream 2314785 23802515 ~ 23809452 (-)
atm atm,LOC102794456 other downstream 2365411 23729488 ~ 23758826 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other upstream 178644 26307064 ~ 26334719 (-)
LOC120570434 fam124b other upstream 305861 26434281 ~ 26445935 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other upstream 322960 26451380 ~ 26469896 (-)
G19840 NA other upstream 960186 27088606 ~ 27089064 (-)
cwf19l2 cwf19l2 other upstream 1696185 27824605 ~ 27847548 (-)

Expression


Co-expression Network